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Lag0038827 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038827
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr2:28225999..28226404
RNA-Seq ExpressionLag0038827
SyntenyLag0038827
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]4.0e-0736.46Show/hide
Query:  IDEASREAYEIEEQR---------FLESEIVNLG-----------WRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        +DEA++E Y+  + R         F E+E  NLG           W++F   P PVN+ IV+EFY+N+   N   V+VRG+ + ++P AIN  F L
Subjt:  IDEASREAYEIEEQR---------FLESEIVNLG-----------WRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]9.8e-0649.18Show/hide
Query:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        F+   I    W+QFCA PE     +VREFY NL    +  V VRGV V WS EAIN +F L
Subjt:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.4e-0649.18Show/hide
Query:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        F+   I    W+QFCA PE     +VREFY NL    +  V VRGV V WS EAIN +F L
Subjt:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.3e-0543.94Show/hide
Query:  IEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        +E+  F+   I+   W+ FCA PE     +VREFYTN+   +D  V +RGV V  S EAIN +F L
Subjt:  IEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]3.4e-0642.27Show/hide
Query:  EEAKRVEEEILPKQREDKGKGIDEASREAYEIEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        EEA+   EE + KQ  +  KG    + E   + +Q F+   I    WRQFCA PE     +VREFY NL    +  V VRGV V W+ EAIN +F L
Subjt:  EEAKRVEEEILPKQREDKGKGIDEASREAYEIEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.7e-0649.18Show/hide
Query:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        F+   I    W+QFCA PE     +VREFY NL    +  V VRGV V WS EAIN +F L
Subjt:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

A0A2P5BCG4 Uncharacterized protein (Fragment)2.1e-0649.18Show/hide
Query:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        F+   I    W+QFCA PE     +VREFY NL    +  V VRGV V WS EAIN +F L
Subjt:  FLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

A0A2P5DAQ2 Uncharacterized protein6.2e-0643.94Show/hide
Query:  IEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        +E+  F+   I+   W+ FCA PE     +VREFYTN+   +D  V +RGV V  S EAIN +F L
Subjt:  IEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

A0A2P5EK98 Uncharacterized protein (Fragment)1.6e-0642.27Show/hide
Query:  EEAKRVEEEILPKQREDKGKGIDEASREAYEIEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        EEA+   EE + KQ  +  KG    + E   + +Q F+   I    WRQFCA PE     +VREFY NL    +  V VRGV V W+ EAIN +F L
Subjt:  EEAKRVEEEILPKQREDKGKGIDEASREAYEIEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

A0A6A2ZUE4 Uncharacterized protein1.9e-0736.46Show/hide
Query:  IDEASREAYEIEEQR---------FLESEIVNLG-----------WRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL
        +DEA++E Y+  + R         F E+E  NLG           W++F   P PVN+ IV+EFY+N+   N   V+VRG+ + ++P AIN  F L
Subjt:  IDEASREAYEIEEQR---------FLESEIVNLG-----------WRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAGAAGAAGCAAAAAGGGTTGAGGAGGAGATTCTGCCCAAGCAAAGAGAAGACAAGGGCAAAGGAATTGATGAAGCATCGCGTGAGGCTTACGAGATTGAGGA
ACAAAGGTTCTTGGAGTCTGAAATCGTGAACCTTGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACACCAATCTTGACG
TTAAGAATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTGCATTGGAGCCCAGAGGCCATTAATAATTTGTTTGATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAAGAAGAAGCAAAAAGGGTTGAGGAGGAGATTCTGCCCAAGCAAAGAGAAGACAAGGGCAAAGGAATTGATGAAGCATCGCGTGAGGCTTACGAGATTGAGGA
ACAAAGGTTCTTGGAGTCTGAAATCGTGAACCTTGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACACCAATCTTGACG
TTAAGAATGATTTTGAGGTTATCGTTCGAGGAGTGCCTGTGCATTGGAGCCCAGAGGCCATTAATAATTTGTTTGATCTCTAG
Protein sequenceShow/hide protein sequence
MREEEAKRVEEEILPKQREDKGKGIDEASREAYEIEEQRFLESEIVNLGWRQFCAKPEPVNSNIVREFYTNLDVKNDFEVIVRGVPVHWSPEAINNLFDL