; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038844 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038844
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:28987186..28987557
RNA-Seq ExpressionLag0038844
SyntenyLag0038844
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKA56961.1 Putative ribonuclease H protein [Apostasia shenzhenica]3.7e-1541.49Show/hide
Query:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        +KS    S+N   E+ I++++ L +K   ++  YLG+P  +GR ++  F+ ++DR+ K ++GWKE L S+GGKE++IK++AQAIP Y MS F++
Subjt:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

PNY15174.1 ribonuclease H, partial [Trifolium pratense]2.4e-1448.42Show/hide
Query:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        M+KS    S+NM  EE   I  K+G+K  ++   YLG+P   GR ++VVF  ++DRV K L+GWKE   S  GKE+LIKS+ QAIP Y MSC+++
Subjt:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]2.1e-1857.61Show/hide
Query:  KSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFR
        KSMFM S+N  +     IE +L + RT  +G YLG+PSQ  R +  VF  + +RV + LQGWKE LFS GGKEVLIK+VAQAIP Y+MSCFR
Subjt:  KSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFR

XP_030924923.1 uncharacterized protein LOC115951949 [Quercus lobata]1.9e-1448.42Show/hide
Query:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        M+KS+   S N+++E   +I+E LG+K  E   SYLG+P+ VG+ +   F  L+DRV K +QGWK  L S  GKE+LIK+VAQ+IP YTM  F++
Subjt:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

XP_030942886.1 uncharacterized protein LOC115967872 [Quercus lobata]1.4e-1448.94Show/hide
Query:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        +KS    S N  +E   ++   LG  +  S   YLG+PS +GR ++VVF +++D+V K L GWK  L SLGGKE+LIK+VAQA+P YTMSCF++
Subjt:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

TrEMBL top hitse value%identityAlignment
A0A2I0AN33 Ribonuclease H protein1.8e-1541.49Show/hide
Query:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        +KS    S+N   E+ I++++ L +K   ++  YLG+P  +GR ++  F+ ++DR+ K ++GWKE L S+GGKE++IK++AQAIP Y MS F++
Subjt:  NKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

A0A2K3PIT6 Ribonuclease H (Fragment)1.2e-1448.42Show/hide
Query:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        M+KS    S+NM  EE   I  K+G+K  ++   YLG+P   GR ++VVF  ++DRV K L+GWKE   S  GKE+LIKS+ QAIP Y MSC+++
Subjt:  MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

A0A2N9EEH0 Uncharacterized protein1.5e-1460.94Show/hide
Query:  LGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        LG+YLG+P  +GRG++  FM+++ ++ K LQGWK  L S  G+E+LIKSVAQAIP+YTMSCFRI
Subjt:  LGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

A0A2N9F3Z3 Uncharacterized protein6.9e-1553.85Show/hide
Query:  IKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI
        + I  +L    T  LG+YLG+P  +GRG++  FM+++ ++ K LQGWK  L S  G+E+LIKSVAQAIP+YTMSCFRI
Subjt:  IKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRI

A0A6J1CV63 uncharacterized protein LOC1110146621.0e-1857.61Show/hide
Query:  KSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFR
        KSMFM S+N  +     IE +L + RT  +G YLG+PSQ  R +  VF  + +RV + LQGWKE LFS GGKEVLIK+VAQAIP Y+MSCFR
Subjt:  KSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAATCTATGTTCATGGCTAGCAAAAACATGAAGAAAGAGGAGATGATTAAGATCGAAGAAAAGCTTGGGATCAAAAGAACTGAGTCTTTAGGCAGTTATCTTGG
AATGCCTTCTCAAGTTGGGAGGGGACAAAGAGTGGTGTTCATGAAACTTAGAGATAGAGTGAAGAAAATTCTCCAGGGGTGGAAAGAGAATCTATTTTCGCTTGGAGGAA
AAGAAGTTCTCATAAAATCCGTAGCCCAAGCTATTCCTATATACACCATGAGTTGCTTTCGCATCCTTATTCTATCTGTAATGAGATCGATAGGTTATGTGCCAGGTTTT
GGTGGGGATCAGTGGGGGGAAAGACCAAAAAGCATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAATCTATGTTCATGGCTAGCAAAAACATGAAGAAAGAGGAGATGATTAAGATCGAAGAAAAGCTTGGGATCAAAAGAACTGAGTCTTTAGGCAGTTATCTTGG
AATGCCTTCTCAAGTTGGGAGGGGACAAAGAGTGGTGTTCATGAAACTTAGAGATAGAGTGAAGAAAATTCTCCAGGGGTGGAAAGAGAATCTATTTTCGCTTGGAGGAA
AAGAAGTTCTCATAAAATCCGTAGCCCAAGCTATTCCTATATACACCATGAGTTGCTTTCGCATCCTTATTCTATCTGTAATGAGATCGATAGGTTATGTGCCAGGTTTT
GGTGGGGATCAGTGGGGGGAAAGACCAAAAAGCATTGGATGA
Protein sequenceShow/hide protein sequence
MNKSMFMASKNMKKEEMIKIEEKLGIKRTESLGSYLGMPSQVGRGQRVVFMKLRDRVKKILQGWKENLFSLGGKEVLIKSVAQAIPIYTMSCFRILILSVMRSIGYVPGF
GGDQWGERPKSIG