; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038845 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038845
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:28987569..28988759
RNA-Seq ExpressionLag0038845
SyntenyLag0038845
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNX96384.1 ribonuclease H, partial [Trifolium pratense]5.3e-5535.94Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +C  K+ GGLGFR L AFN+A+LAK SWR+I NP S++ +VL+ +Y+   D + A    + S TWRSI     +  +G  W +G+G   +I  D WI + 
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  -----CPPRPTLKDPSLKGHKVYKLLDDKNH-WKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKL
             C P+P     +L   KV +L+D  N+ WKE++I Q F P+ A+ IL I   DK   D + W + + G +SVKS YH  +E  + + A+ S+ S+ 
Subjt:  -----CPPRPTLKDPSLKGHKVYKLLDDKNH-WKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKL

Query:  VPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNF
           W+ IW   V P+     W+++   +P K+N+ K+GV  +PLCP C    ETT H+  DC+  K +W      SLNL +   +     D   ++++N 
Subjt:  VPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNF

Query:  NQEEIERSLVVMWSLWNLRN
        N+E IE+   +++ +W  RN
Subjt:  NQEEIERSLVVMWSLWNLRN

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]3.9e-5837.42Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR-
        +CK K  GG+GFR+L AFN AMLAK  WR+I NP+S++ ++ + RY+ +GD   A +G SPS TWRSI  G E+  +G +WRVGNG +I I  D W+P  
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR-

Query:  -----LCPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVA---IESKNPMEASQSD
             + PP+P    P     +V  L+D ++  WK++V+R  F P  A+ IL+I       ED+I W  N+KG FSVKSAY++A   I++    E+S  D
Subjt:  -----LCPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVA---IESKNPMEASQSD

Query:  KSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWI
           L+  WRK+W+  + P+ +I  WK+    +P   N+ ++GV++  +CP C    E+  HI   C++ K +W   +    +L+ +N +     D    I
Subjt:  KSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWI

Query:  VDNFNQEEIERSLVVMWSLWNLRNKV
        +D     ++E   VV W++W  RNK+
Subjt:  VDNFNQEEIERSLVVMWSLWNLRNKV

XP_030479238.1 uncharacterized protein LOC115696478 [Cannabis sativa]1.2e-5434.49Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +C  K +GGLGFR L + NQAMLAK +WR++ NP+S+L  +L+ +YFK  +++ A +GH+PS TW S+ WG++L ++G  W+VGNG  I    DPWIP +
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  CPPRPTLKDPSL-KGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR
            P L+   L    KV   +D+   W  + ++Q FD +    IL I  G     D + W+    G FSVKSAYH+A  +  P   S SD S    +W+
Subjt:  CPPRPTLKDPSL-KGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR

Query:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEI
         +WN  V P+ K   W++ + ++P   N+  +     P C  C    ET TH + DC     IW       L    L+      KD      +  +++++
Subjt:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEI

Query:  ERSLVVMWSLWNLRNK
           +  +W++W  RNK
Subjt:  ERSLVVMWSLWNLRNK

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]1.2e-5435.19Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +CK K +GGLGFR+   FNQA+LAK +WR++++P+S+L +VL  RYF NG+ ++A +G +PS+TWRSI WGKEL ++G KWRVG G  I+ ++D W+P  
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  CPPRP-TLKDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR
            P + K P     +V  L+D    W    I   F P     IL I      +ED + W+    G ++VKS Y  A+   +  E + S  + L  +W 
Subjt:  CPPRP-TLKDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR

Query:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLN---REGWSSKDHWSWIVDNFNQ
        K W  ++  + +I  WK+ +  +P    + ++ ++  P CPLC+ H ET  H ++ C   K +W +      +LLV N       +S D   ++  N + 
Subjt:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLN---REGWSSKDHWSWIVDNFNQ

Query:  EEIERSLVVMWSLWNLRNKVEHSQ
         E E+ LV+ WS+W  RN   H++
Subjt:  EEIERSLVVMWSLWNLRNKVEHSQ

XP_030970416.1 uncharacterized protein LOC115990765 [Quercus lobata]1.6e-5436.83Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR-
        MCK K  GG+GFR+L AFN AMLAK  WR+I NP+S++ K+ R RY+ +GD   + +G SPS TWRSI  G E+  +G +WRVGNG +I I  D W+P  
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR-

Query:  -----LCPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQ-SDKS
             + PP+     P     +V  L+D +   WK E++R  F P  A+ ILNI       +D+I W  NK G FSVKSAY++A +  N  +  + S+  
Subjt:  -----LCPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQ-SDKS

Query:  KLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVD
             WRK+W+  + P+ +I  W++    +P   N+  +GV    +CP C K  ET +H+   C++ K +W   +     L+VLN       D    I+ 
Subjt:  KLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVD

Query:  NFNQEEIERSLVVMWSLWNLRNKV--EHSQSKPD
        + +  E+E      W++W+ RN++  E S   PD
Subjt:  NFNQEEIERSLVVMWSLWNLRNKV--EHSQSKPD

TrEMBL top hitse value%identityAlignment
A0A2K3N033 Ribonuclease H (Fragment)2.6e-5535.94Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +C  K+ GGLGFR L AFN+A+LAK SWR+I NP S++ +VL+ +Y+   D + A    + S TWRSI     +  +G  W +G+G   +I  D WI + 
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  -----CPPRPTLKDPSLKGHKVYKLLDDKNH-WKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKL
             C P+P     +L   KV +L+D  N+ WKE++I Q F P+ A+ IL I   DK   D + W + + G +SVKS YH  +E  + + A+ S+ S+ 
Subjt:  -----CPPRPTLKDPSLKGHKVYKLLDDKNH-WKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKL

Query:  VPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNF
           W+ IW   V P+     W+++   +P K+N+ K+GV  +PLCP C    ETT H+  DC+  K +W      SLNL +   +     D   ++++N 
Subjt:  VPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNF

Query:  NQEEIERSLVVMWSLWNLRN
        N+E IE+   +++ +W  RN
Subjt:  NQEEIERSLVVMWSLWNLRN

A0A2N9EC60 Reverse transcriptase domain-containing protein8.0e-5734.72Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        MC  K+ GG+GFR L +FNQAMLAK  WR +++ HS++Y+V + +YF     + A +G +PS  WRS+  G++  +KG KW+VG+G  I++  D W+   
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  CPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAI-ESKNPMEASQSDKSKLVPFW
         P  P  +     G  V  L+D D+N W EE+I   FD  IA  I  I   +  S+D+ FW     G FSV SAY + + E  +P+ A  S+  ++   W
Subjt:  CPPRPTLKDPSLKGHKVYKLLD-DKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAI-ESKNPMEASQSDKSKLVPFW

Query:  RKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEE
        RK+W  R+  + K   W+  +E +P   N+ ++ +  N LC  C +  ETT+H++W C     +W ++  K L    ++ E + +    S +     +EE
Subjt:  RKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEE

Query:  IERSLVVMWSLWNLRNKVEHSQSKPDIEQSI-KGIEM
        +E   VV WSLWN RN+  H   +  +E  + KG+ +
Subjt:  IERSLVVMWSLWNLRNKVEHSQSKPDIEQSI-KGIEM

A0A803P9P5 Uncharacterized protein4.3e-5835.38Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +CK K  GG+GF+    +NQA+LAK SW I  NP S+L+K+L+ RYFK   ++ A +G  PS+TWRSI WGKEL  KG +W+VGNG++I   +DPW+P +
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  CPPRPTL-KDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR
           +P + K+PSL   KV +L+ ++  W   +++Q F      +I +I     D  D++ W+    G +SVKS Y +A   +  + A+ S+ S  + +W+
Subjt:  CPPRPTL-KDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWR

Query:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEI
        K W+  +  + KI  W+ +++ +P  D +  + +S + +C LC +  E+TTH ++ CK P+ IW      S ++        S  D    +   ++ ++I
Subjt:  KIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEI

Query:  ERSLVVMWSLWNLRNKVEH-SQSKP
        E+   ++WS+WN RNK  H S++KP
Subjt:  ERSLVVMWSLWNLRNKVEH-SQSKP

A0A803QBU0 Uncharacterized protein2.6e-5533.96Show/hide
Query:  CKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRLC
        CK K  GG+GFR    FNQA+LAK +WR+++NP S+L  +L+ +YF N  ++ A +GHSPS+TW+ I WG+EL +KG +W++G G  I    DPWIP   
Subjt:  CKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRLC

Query:  PPRP-TLKDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWRK
           P T   PS     V  L+ D   W   +++Q F P    +IL +      S D++ W  +  G F+V+SAYH+A   +   E   S  +  V +W+ 
Subjt:  PPRP-TLKDPSLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWRK

Query:  IWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEIE
         W+ +V  + KI  W+ I++ +P   ++ ++ +  +  C +C++ +E+T H ++ CK  K +W R +  S N  V       + D+ + +   +N+ E+E
Subjt:  IWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEIE

Query:  RSLVVMWSLWNLRNKVEHSQS
        + L  MW++W  RN V H ++
Subjt:  RSLVVMWSLWNLRNKVEHSQS

A0A803QQT2 Uncharacterized protein6.8e-5635.01Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL
        +C+ KD GGLGFR L  FNQA+LAK  WR +++P  +  +VL+  YF     + A  G + S  WRS+ WGK+L +KG++WRVGNG  + +  DPW+PR 
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRL

Query:  CPPRPTLKDPSLKGHKV---YKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPF
           +     PSL  +      KL D    W E  IR  F+P     IL I   D D ED+I W  +K G +SVKS Y +A  +    E  QS++  +V +
Subjt:  CPPRPTLKDPSLKGHKV---YKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPF

Query:  WRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHY-ETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSW---IVDN
        W+K+W  ++ P+ K   WK+ +  +P   N+ K+G++ + +C  C  H  E+  H +W+CK  K  W       ++ L  + +    +D+ +    I   
Subjt:  WRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHY-ETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSW---IVDN

Query:  FNQEEIERSLVVMWSLWNLRNKVEHSQSKPDIEQSIK
        +++E++E  L+V W++WN+RN V H    P  E+ I+
Subjt:  FNQEEIERSLVVMWSLWNLRNKVEHSQSKPDIEQSIK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.4e-2624.92Show/hide
Query:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYF--KNGDYISALVGHSPSMTWRSICWG-KELFMKGFKWRVGNGSKISIENDPWI
        +C  K  GGLG R   + N+A+++K+ WR+++  +S+   VL+ +Y   +  D    +   S S TWRSI  G +++   G  W  G+G +I    D W+
Subjt:  MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYF--KNGDYISALVGHSPSMTWRSICWG-KELFMKGFKWRVGNGSKISIENDPWI

Query:  PRLCPPRPTLKDPSLKGHKVYKLLDDKNHW--KEEVIRQAFDPHIAKE--------ILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEAS
              +P L+  + +       +  K+ W           DP+            +L+++TG   + D + W  ++ G FSV+SAY +    + P    
Subjt:  PRLCPPRPTLKDPSLKGHKVYKLLDDKNHW--KEEVIRQAFDPHIAKE--------ILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEAS

Query:  QSDKSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHW
           +  +  F+  +W  RV  R K   W + N+ +  ++   ++ +S + +C +C+   E+  H++ DC     IW R++P+        ++G+ SK  +
Subjt:  QSDKSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHW

Query:  SWIVDNFNQ----EEIERS---LVVMWSLWNLR
         W+ DN       E+I  S    V++W  W  R
Subjt:  SWIVDNFNQ----EEIERS---LVVMWSLWNLR

P93295 Uncharacterized mitochondrial protein AtMg003108.4e-1946.23Show/hide
Query:  MCKVK-DYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR
        +CK K D GGLGFR L  FNQA+LAK S+RII  PH++L ++LR RYF +   +   VG  PS  WRSI  G+EL  +G    +G+G    +  D WI  
Subjt:  MCKVK-DYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR

Query:  LCPPRP
          P  P
Subjt:  LCPPRP

Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.9e-0830.99Show/hide
Query:  IWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSL
        IW+ ++ P+ K+  WK +N  +P    +  + +S+ P C  CR  +ET THI+++C   +     +I KS+
Subjt:  IWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSL

AT4G29090.1 Ribonuclease H-like superfamily protein3.8e-3527.12Show/hide
Query:  KDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIP------
        K  GG+GF+ + AFN A+L K  WR++  P S++ KV + RYF   D ++A +G  PS  W+SI   +E+  +G +  VGNG  I I    W+       
Subjt:  KDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIP------

Query:  ----RLCPPRPTLKDPSLKGHKVYKLLDDK-NHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQS-DKS
            +  PP+      S+   KV  L+D+    W+++VI   F     K I  +  G +   D   W     G ++VKS Y V  +  N   + Q   + 
Subjt:  ----RLCPPRPTLKDPSLKGHKVYKLLDDK-NHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQS-DKS

Query:  KLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWG-RIIPKSLNLLVLNREGWSSKD----HW
         L P ++KIW ++  P+ +   WK ++  +P    +  + +S    C  C    ET  H+++ C   +  W    IP  L         W+       +W
Subjt:  KLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWG-RIIPKSLNLLVLNREGWSSKD----HW

Query:  SWIVDNFNQEEIERSLVVMWSLWNL---RNKVEHSQSKPDIEQSIKGIEMNLED
         + + N N +  + S +V W LW L   RN++     + + ++ ++  E +LE+
Subjt:  SWIVDNFNQEEIERSLVVMWSLWNL---RNKVEHSQSKPDIEQSIKGIEMNLED

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.0e-0523.26Show/hide
Query:  HSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRLCPPRPTLKD--PSLKG----HKVYKLLDDKNHW------KEEVIRQAFDPHIAKEILN
        +S S  W+SIC  + +  +    +VG+G   +  ++ W   L P      D  P + G      V   L D   W      +  +I+   +      ++N
Subjt:  HSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRLCPPRPTLKD--PSLKG----HKVYKLLDDKNHW------KEEVIRQAFDPHIAKEILN

Query:  ILTGDKDSEDEIF-W----SSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPL
        +     D+ED++F W    S    G  S  +  H+     NP+        + V + + IW    +P+     W  I   +P +D +   G+ +  LC L
Subjt:  ILTGDKDSEDEIF-W----SSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPL

Query:  CRKHYETTTHIIWDC
        C    ET  H+ +DC
Subjt:  CRKHYETTTHIIWDC

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-0426.39Show/hide
Query:  SKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIW
        S  VP+ + +W    +PR  +  W    E +P +D +   G+++     LC    ET  H+ ++C     IW
Subjt:  SKLVPFWRKIWNARVLPRTKICCWKIINEVIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-2046.23Show/hide
Query:  MCKVK-DYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR
        +CK K D GGLGFR L  FNQA+LAK S+RII  PH++L ++LR RYF +   +   VG  PS  WRSI  G+EL  +G    +G+G    +  D WI  
Subjt:  MCKVK-DYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPR

Query:  LCPPRP
          P  P
Subjt:  LCPPRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGTCAAAGATTATGGAGGGTTAGGCTTTAGGCATCTCTCAGCCTTCAACCAAGCGATGCTCGCCAAGATTAGTTGGAGAATTATTAAGAACCCTCACAGTAT
CCTGTATAAAGTGCTAAGGGGGCGGTATTTCAAAAATGGTGACTATATTAGCGCTCTTGTCGGCCACTCCCCTTCAATGACTTGGAGAAGCATTTGTTGGGGTAAGGAGC
TTTTCATGAAGGGTTTCAAGTGGCGTGTGGGTAATGGTTCCAAAATATCTATTGAGAATGACCCCTGGATCCCTAGGCTCTGCCCCCCAAGGCCCACGCTTAAGGACCCC
AGCCTTAAAGGGCATAAGGTGTACAAGCTGCTTGATGACAAAAACCATTGGAAGGAAGAAGTTATCAGGCAAGCTTTTGATCCTCATATAGCAAAGGAAATTCTCAACAT
CCTGACAGGAGATAAAGATTCTGAAGATGAGATCTTTTGGAGCTCGAACAAGAAAGGAACTTTCTCTGTCAAAAGTGCCTATCATGTGGCCATTGAATCCAAAAACCCCA
TGGAAGCTTCTCAATCGGATAAGTCTAAATTGGTGCCTTTTTGGAGGAAGATTTGGAATGCTCGGGTTCTCCCTAGGACCAAAATTTGCTGTTGGAAAATCATCAATGAG
GTGATTCCGTGCAAGGACAACATCACCAAGCAGGGAGTTTCTTTAAACCCTTTATGTCCTCTCTGCAGAAAGCATTATGAAACAACTACTCATATTATTTGGGACTGTAA
AATCCCTAAACATATATGGGGAAGGATTATCCCTAAATCTCTAAATCTTCTTGTTTTGAACAGGGAGGGGTGGTCGTCGAAAGATCACTGGAGCTGGATTGTGGATAATT
TCAATCAAGAGGAGATAGAGAGAAGCTTGGTTGTGATGTGGAGCTTATGGAATCTCAGAAATAAAGTGGAACATTCACAATCAAAGCCAGACATTGAGCAAAGCATAAAA
GGCATAGAGATGAACTTGGAAGATCTGCCAAGTGTTGATTCCGATGGCGTCAGGAGCAATCTGAGAAACCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTAATCTTTTCCATAAATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGTCAAAGATTATGGAGGGTTAGGCTTTAGGCATCTCTCAGCCTTCAACCAAGCGATGCTCGCCAAGATTAGTTGGAGAATTATTAAGAACCCTCACAGTAT
CCTGTATAAAGTGCTAAGGGGGCGGTATTTCAAAAATGGTGACTATATTAGCGCTCTTGTCGGCCACTCCCCTTCAATGACTTGGAGAAGCATTTGTTGGGGTAAGGAGC
TTTTCATGAAGGGTTTCAAGTGGCGTGTGGGTAATGGTTCCAAAATATCTATTGAGAATGACCCCTGGATCCCTAGGCTCTGCCCCCCAAGGCCCACGCTTAAGGACCCC
AGCCTTAAAGGGCATAAGGTGTACAAGCTGCTTGATGACAAAAACCATTGGAAGGAAGAAGTTATCAGGCAAGCTTTTGATCCTCATATAGCAAAGGAAATTCTCAACAT
CCTGACAGGAGATAAAGATTCTGAAGATGAGATCTTTTGGAGCTCGAACAAGAAAGGAACTTTCTCTGTCAAAAGTGCCTATCATGTGGCCATTGAATCCAAAAACCCCA
TGGAAGCTTCTCAATCGGATAAGTCTAAATTGGTGCCTTTTTGGAGGAAGATTTGGAATGCTCGGGTTCTCCCTAGGACCAAAATTTGCTGTTGGAAAATCATCAATGAG
GTGATTCCGTGCAAGGACAACATCACCAAGCAGGGAGTTTCTTTAAACCCTTTATGTCCTCTCTGCAGAAAGCATTATGAAACAACTACTCATATTATTTGGGACTGTAA
AATCCCTAAACATATATGGGGAAGGATTATCCCTAAATCTCTAAATCTTCTTGTTTTGAACAGGGAGGGGTGGTCGTCGAAAGATCACTGGAGCTGGATTGTGGATAATT
TCAATCAAGAGGAGATAGAGAGAAGCTTGGTTGTGATGTGGAGCTTATGGAATCTCAGAAATAAAGTGGAACATTCACAATCAAAGCCAGACATTGAGCAAAGCATAAAA
GGCATAGAGATGAACTTGGAAGATCTGCCAAGTGTTGATTCCGATGGCGTCAGGAGCAATCTGAGAAACCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTAATCTTTTCCATAAATGACTAA
Protein sequenceShow/hide protein sequence
MCKVKDYGGLGFRHLSAFNQAMLAKISWRIIKNPHSILYKVLRGRYFKNGDYISALVGHSPSMTWRSICWGKELFMKGFKWRVGNGSKISIENDPWIPRLCPPRPTLKDP
SLKGHKVYKLLDDKNHWKEEVIRQAFDPHIAKEILNILTGDKDSEDEIFWSSNKKGTFSVKSAYHVAIESKNPMEASQSDKSKLVPFWRKIWNARVLPRTKICCWKIINE
VIPCKDNITKQGVSLNPLCPLCRKHYETTTHIIWDCKIPKHIWGRIIPKSLNLLVLNREGWSSKDHWSWIVDNFNQEEIERSLVVMWSLWNLRNKVEHSQSKPDIEQSIK
GIEMNLEDLPSVDSDGVRSNLRNRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIFSIND