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Lag0038856 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038856
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2
Genome locationchr2:29334545..29335330
RNA-Seq ExpressionLag0038856
SyntenyLag0038856
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATV98600.1 hypothetical chloroplast RF21 [Barringtonia edulis]1.4e-0772.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
PWA76044.1 hypothetical protein CTI12_AA236460 [Artemisia annua]1.8e-0775Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WSK  +      GK I YDEEDELQENDSEFLQSGTVQYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
QSQ71645.1 hypothetical chloroplast RF21 [Syringa reticulata subsp. amurensis]3.1e-0775Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WSK  + K    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
YP_009419012.1 Ycf2 [Barringtonia fusicarpa]1.4e-0772.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
YP_009419360.1 Ycf2 [Barringtonia racemosa]1.4e-0772.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
TrEMBL top hitse value%identityAlignment
A0A221HVR1 Protein Ycf26.7e-0872.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
A0A221HWK6 Protein Ycf26.7e-0872.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
A0A286SBA1 Protein Ycf22.0e-0794.29Show/hide
Query:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        GK I YDEEDELQENDSEFLQSGTVQYQTRDRSSK
Subjt:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
A0A2H4NYT0 Protein Ycf26.7e-0872.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS  + F+    GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
A0A2U1NRB3 ATPase_AAA_core domain-containing protein8.8e-0875Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WSK  +      GK I YDEEDELQENDSEFLQSGTVQYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
SwissProt top hitse value%identityAlignment
A0A379 Protein Ycf21.2e-0991.43Show/hide
Query:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        GK I YDEEDELQENDSEFLQ+GTVQYQTRDRSSK
Subjt:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
B2LMN7 Protein Ycf25.3e-1072.92Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS+  +      GK I YDEEDELQENDSEFLQSGTVQYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
Q0G9Q1 Protein Ycf21.2e-0970.83Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS+  +      GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
Q2QD30 Protein Ycf25.3e-1094.29Show/hide
Query:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        GK I YDEEDELQENDSEFLQSGTVQYQTRDRSSK
Subjt:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
Q3C1N4 Protein Ycf21.2e-0970.83Show/hide
Query:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        +WS+  +      GK I YDEEDELQENDSEFLQSGT+QYQTRDRSSK
Subjt:  FWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core1.3e-0882.86Show/hide
Query:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        GK I YDE+ ELQENDSEFLQSGT+QYQ RDRSSK
Subjt:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core1.3e-0882.86Show/hide
Query:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK
        GK I YDE+ ELQENDSEFLQSGT+QYQ RDRSSK
Subjt:  GKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCCCACCTATGAGAATCTCTAGGAAACCTGCACTTGCTCGAACTGGAATCCTGCCAATTCCAAGTTCTCATCATGCTGAATTTCTCGCACTGGGATATGATCT
AGCACGGGCTCTTGTGGATCTCCAATACTTGACCTTTCTCGATGCTTTTTTTTGGTCCAAGCGGAAGAAGTTCAAGAATGGTCCCTCGGGCAAGCATATCAATTATGATG
AAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCGAAAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATCCCACCTATGAGAATCTCTAGGAAACCTGCACTTGCTCGAACTGGAATCCTGCCAATTCCAAGTTCTCATCATGCTGAATTTCTCGCACTGGGATATGATCT
AGCACGGGCTCTTGTGGATCTCCAATACTTGACCTTTCTCGATGCTTTTTTTTGGTCCAAGCGGAAGAAGTTCAAGAATGGTCCCTCGGGCAAGCATATCAATTATGATG
AAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCGAAAGCGTAG
Protein sequenceShow/hide protein sequence
MIIPPMRISRKPALARTGILPIPSSHHAEFLALGYDLARALVDLQYLTFLDAFFWSKRKKFKNGPSGKHINYDEEDELQENDSEFLQSGTVQYQTRDRSSKA