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Lag0038857 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038857
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionribosomal protein L5
Genome locationchr2:29340709..29341658
RNA-Seq ExpressionLag0038857
SyntenyLag0038857
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFY03535.1 ribosomal protein L5, partial [Lagenaria siceraria]5.5e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

AUD39316.1 ribosomal protein subunit L5 [Augusta austrocaledonica]1.6e-1794.23Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE+SPELEDHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

QHE65829.1 ribosomal protein L5 [Castanospermum australe]1.6e-1794.23Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE+SPELEDHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

YP_003587255.1 ribosomal protein L5 [Citrullus lanatus]5.5e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

YP_009913650.1 ribosomal protein L5 [Luffa acutangula]5.5e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

TrEMBL top hitse value%identityAlignment
A0A2H4X171 Ribosomal protein subunit L57.8e-1894.23Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE+SPELEDHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

A0A6B9QFQ7 Ribosomal protein L57.8e-1894.23Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE+SPELEDHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

A0A7D5Y005 Ribosomal protein L52.7e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

D5I3C5 Ribosomal protein L52.7e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

K7Z325 Ribosomal protein L5 (Fragment)2.7e-1896.15Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSPVEIRENSIQFSMETEFCE SPELEDHFEIFEHILGFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

SwissProt top hitse value%identityAlignment
P26860 60S ribosomal protein L5, mitochondrial1.5e-1061.54Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        +S  D PV+I++NSIQ SM T    + PE++DHFEIFEHI GF+VTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

P42793 60S ribosomal protein L5, mitochondrial6.8e-1988.46Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLD PVEIR+NSIQFSMETEFCE SPELEDHFEIFEHI GFNVTI+TSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

P49388 60S ribosomal protein L5, mitochondrial5.8e-1884.62Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLD PVEIR+NSIQFSMETEFCE +P+L+DHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

P51409 60S ribosomal protein L5, mitochondrial4.0e-1990.38Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDSP+EIRE SIQFSMETEFCE SPELEDHFEIFEHI GFNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

Q05492 60S ribosomal protein L5, mitochondrial3.4e-1890.38Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLDS VEIRENSIQFSMETEFCE SPELEDHFEIFEHI  FNVTIVTSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

Arabidopsis top hitse value%identityAlignment
AT2G07725.1 Ribosomal L5P family protein4.8e-2088.46Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLD PVEIR+NSIQFSMETEFCE SPELEDHFEIFEHI GFNVTI+TSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS

ATMG00210.1 ribosomal protein L54.8e-2088.46Show/hide
Query:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS
        MSLLD PVEIR+NSIQFSMETEFCE SPELEDHFEIFEHI GFNVTI+TSA+
Subjt:  MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTTAGATTCTCCAGTCGAAATACGGGAAAACTCCATTCAATTCTCAATGGAAACGGAGTTTTGCGAAATCTCCCCGGAACTGGAAGATCATTTCGAGATCTT
CGAACATATTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAGTGCGTTCTGCACCGGCAGCAACGCAGAAAGGCGCAGGTTGATCTCTCTGGTTGAGGCTGCATTAA
TTTATTCAACTTTACACATGGGAAGGGCTTACTCTCCTCAGCTTGGTCTCGCTCCCTTCCCGCACTATTCCTCCCCACTAAAAAGAGCGATTGACTTTCTCGATAACCTT
TCTAAACGTCCGTCTTCGCGTGGCGATTTAGAAAGGGGTCCAATTCCATATGCTTGCGAACCGGAGACAATCGTATCCATGGAGGCTCCAAGAGGAAACCTTCTCTCTCT
GGCTTTCATCTCCTTCTCTTGGACCACGCCTCCCGGTCTCATTGAACTTTCTTTCGACAATGATGAAGATCTCTTTGTTTTGAGGTCGACAAAGATTTGCATTCCATTAG
GTGTTCAAACAGACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTTAGATTCTCCAGTCGAAATACGGGAAAACTCCATTCAATTCTCAATGGAAACGGAGTTTTGCGAAATCTCCCCGGAACTGGAAGATCATTTCGAGATCTT
CGAACATATTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAGTGCGTTCTGCACCGGCAGCAACGCAGAAAGGCGCAGGTTGATCTCTCTGGTTGAGGCTGCATTAA
TTTATTCAACTTTACACATGGGAAGGGCTTACTCTCCTCAGCTTGGTCTCGCTCCCTTCCCGCACTATTCCTCCCCACTAAAAAGAGCGATTGACTTTCTCGATAACCTT
TCTAAACGTCCGTCTTCGCGTGGCGATTTAGAAAGGGGTCCAATTCCATATGCTTGCGAACCGGAGACAATCGTATCCATGGAGGCTCCAAGAGGAAACCTTCTCTCTCT
GGCTTTCATCTCCTTCTCTTGGACCACGCCTCCCGGTCTCATTGAACTTTCTTTCGACAATGATGAAGATCTCTTTGTTTTGAGGTCGACAAAGATTTGCATTCCATTAG
GTGTTCAAACAGACTATTGA
Protein sequenceShow/hide protein sequence
MSLLDSPVEIRENSIQFSMETEFCEISPELEDHFEIFEHILGFNVTIVTSASAFCTGSNAERRRLISLVEAALIYSTLHMGRAYSPQLGLAPFPHYSSPLKRAIDFLDNL
SKRPSSRGDLERGPIPYACEPETIVSMEAPRGNLLSLAFISFSWTTPPGLIELSFDNDEDLFVLRSTKICIPLGVQTDY