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Lag0038858 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038858
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Genome locationchr2:29343140..29343632
RNA-Seq ExpressionLag0038858
SyntenyLag0038858
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEX57702.1 hypothetical protein RasatMp071 [Raphanus sativus]9.2e-0756.67Show/hide
Query:  LSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
        L S + AW  +       P  PY      R + SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  LSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
CAN65992.1 hypothetical protein VITISV_042149 [Vitis vinifera]2.7e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
KAG2247429.1 hypothetical protein Bca52824_087057 [Brassica carinata]2.7e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
KAG2308121.1 hypothetical protein Bca52824_027869 [Brassica carinata]2.7e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
KJB09807.1 hypothetical protein B456_001G168300, partial [Gossypium raimondii]2.4e-0751.61Show/hide
Query:  CSLSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
        C + + L       S     P  P++ +   R + SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  CSLSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
TrEMBL top hitse value%identityAlignment
A0A0D2LZI2 Uncharacterized protein (Fragment)1.2e-0751.61Show/hide
Query:  CSLSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
        C + + L       S     P  P++ +   R + SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  CSLSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
A0A2G2YFB0 Photosystem I P700 chlorophyll a apoprotein A11.3e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
A0A2Z6LMJ7 Uncharacterized protein1.3e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
A5BTN0 Uncharacterized protein1.3e-0696.3Show/hide
Query:  SQVVRHRFLVPACKGSNPFTPDYEHPM
        SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  SQVVRHRFLVPACKGSNPFTPDYEHPM
R4I232 Uncharacterized protein4.5e-0756.67Show/hide
Query:  LSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
        L S + AW  +       P  PY      R + SQVVRHRFLVPACKGSNPFTPDYEHP+
Subjt:  LSSTLGAWGLEISKGGTDPREPYVQTGLERRD-SQVVRHRFLVPACKGSNPFTPDYEHPM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTGCCTATTCTCTAGCAGCGCTGGTAAAACTCCTATTCTGTTTGCCGTGAAGAAAGTACCAAATGAGACTTGTCTTCCTTTTACCTTAAATAAAATGACCAG
GCCGAAAGGTAAATTCTGTAGCCTAAGCTCGACATTAGGAGCATGGGGGCTCGAGATATCTAAAGGAGGTACGGACCCGCGGGAACCGTATGTCCAAACAGGCTTGGAAA
GGCGGGATAGCCAAGTGGTAAGGCATCGGTTTTTGGTGCCGGCATGCAAAGGTTCGAATCCTTTTACTCCAGATTATGAACACCCGATGCCAAACGGTTTCCAGTATGCC
TATACAGTCAATCTTTACACACATGATAGTGGCAGCCAGGTTATCGACGATTCTACAATAGGCGGCCGCTACCCGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTGCCTATTCTCTAGCAGCGCTGGTAAAACTCCTATTCTGTTTGCCGTGAAGAAAGTACCAAATGAGACTTGTCTTCCTTTTACCTTAAATAAAATGACCAG
GCCGAAAGGTAAATTCTGTAGCCTAAGCTCGACATTAGGAGCATGGGGGCTCGAGATATCTAAAGGAGGTACGGACCCGCGGGAACCGTATGTCCAAACAGGCTTGGAAA
GGCGGGATAGCCAAGTGGTAAGGCATCGGTTTTTGGTGCCGGCATGCAAAGGTTCGAATCCTTTTACTCCAGATTATGAACACCCGATGCCAAACGGTTTCCAGTATGCC
TATACAGTCAATCTTTACACACATGATAGTGGCAGCCAGGTTATCGACGATTCTACAATAGGCGGCCGCTACCCGACTTAG
Protein sequenceShow/hide protein sequence
MNNCLFSSSAGKTPILFAVKKVPNETCLPFTLNKMTRPKGKFCSLSSTLGAWGLEISKGGTDPREPYVQTGLERRDSQVVRHRFLVPACKGSNPFTPDYEHPMPNGFQYA
YTVNLYTHDSGSQVIDDSTIGGRYPT