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Lag0038868 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038868
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
Genome locationchr2:29505367..29509110
RNA-Seq ExpressionLag0038868
SyntenyLag0038868
Gene Ontology termsGO:0009086 - methionine biosynthetic process (biological process)
GO:0032259 - methylation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008705 - methionine synthase activity (molecular function)
InterPro domainsIPR038071 - UROD/MetE-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0752369.1 hypothetical protein [Gossypium gossypioides]1.3e-2068.29Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+ASF+TL+EL A+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ++VEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

MBA0844074.1 hypothetical protein [Gossypium armourianum]9.9e-2163.22Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIHNVL
        VDGRNIW  DL+ASF+TL+EL A+VGK           LHTA+DL+NE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE+ +++
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIHNVL

XP_008443293.1 PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Cucumis melo]5.8e-2170.73Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAA+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

XP_022983720.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Cucurbita maxima]1.3e-2069.51Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAA+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  G+KDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

XP_038904556.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Benincasa hispida]4.4e-2171.95Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAAIVGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

TrEMBL top hitse value%identityAlignment
A0A1S3B7N0 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase2.8e-2170.73Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAA+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

A0A5D3DPF4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase2.8e-2170.73Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAA+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

A0A6J1J6Q0 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase6.2e-2169.51Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TLEELAA+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ+IVEVNALAKA  G+KDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

A0A7J9CV62 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment)6.2e-2168.29Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+ASF+TL+EL A+VGK           LHTA+DL+NE+KLDNEIKSWL FAAQ++VEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

A0A7J9KCB5 Meth_synt_1 domain-containing protein4.8e-2163.22Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIHNVL
        VDGRNIW  DL+ASF+TL+EL A+VGK           LHTA+DL+NE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE+ +++
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIHNVL

SwissProt top hitse value%identityAlignment
O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 16.0e-2164.63Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  D +AS +TL+ L  IVGK           LHTA+DLINE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

P93263 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase1.0e-2064.63Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS  TLE L  +VGK           LHTA+DLINE+KLD+EIKSWL FAAQ+++EVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

Q2QLY4 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 27.1e-2264.29Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIH
        VDGRNIW  DL+AS  TLE L AIVGK           +HTA+DL+NE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE +
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIH

Q2QLY5 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 17.1e-2264.29Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIH
        VDGRNIW  DL+AS  TLE L AIVGK           +HTA+DL+NE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE +
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIH

Q42699 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase1.0e-2063.41Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS +TL+ L  IVGK           LHTA+DL+NE KLD EIKSWL FAAQ++VEVNALAKA  G+KDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

Arabidopsis top hitse value%identityAlignment
AT3G03780.1 methionine synthase 26.8e-2060.98Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS  TL+ L  +VGK           LHTA+DLINE+KLD EIKSWL FAAQ++VEV+ALAKA  GQ +E
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

AT3G03780.2 methionine synthase 26.8e-2060.98Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS  TL+ L  +VGK           LHTA+DLINE+KLD EIKSWL FAAQ++VEV+ALAKA  GQ +E
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

AT3G03780.3 methionine synthase 26.8e-2060.98Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  DL+AS  TL+ L  +VGK           LHTA+DLINE+KLD EIKSWL FAAQ++VEV+ALAKA  GQ +E
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

AT5G17920.1 Cobalamin-independent synthase family protein4.3e-2264.63Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  D +AS +TL+ L  IVGK           LHTA+DLINE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE

AT5G17920.2 Cobalamin-independent synthase family protein4.3e-2264.63Show/hide
Query:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE
        VDGRNIW  D +AS +TL+ L  IVGK           LHTA+DLINE+KLD+EIKSWL FAAQ++VEVNALAKA  GQKDE
Subjt:  VDGRNIWTKDLSASFNTLEELAAIVGK----------ALHTAIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTTCTTTCGAACAAGAAGATCAAACCAACCACAAAGGCTATCTCTGAAGGCTTGCGAAGAAGGAGAAGTTCATACACAAAACAAGGTGACAATTCTTCAAGGGA
CTTCGTTGGTGGCAACCGTTTGAATAGAAGAAATATGGTGGTGATACACCTTACAGTTGCCCTTGTTGCTACAACCCAGACCTTGAGCAACATTGATCTGAGCACCCGAG
TTAGGTCTGTGCAAAATGTTGATGGTAGGAACATTTGGACCAAAGATCTTTCTGCTTCATTTAATACATTGGAGGAACTGGCTGCCATTGTGGGTAAAGCTCTTCACACT
GCTATTGACCTTATCAATGAAAGCAAATTGGACAATGAAATCAAATCATGGCTAGATTTTGCTGCTCAAGAGATTGTTGAAGTTAATGCATTGGCAAAGGCTTTCATTGG
TCAAAAGGATGAGATCCACAATGTTTTGGACATTAAGGTTGGAAACTTAGCATTGTTTCTTGAACGTTCTTCCCATGTGGATCAACTTGAGAGCAAAGTTAATCCAATTT
TAAACAAGGTGATGAAGATTACTACGAATCGGGTGATGCCGAGGAGGAGGCCTGAGGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTTCTTTCGAACAAGAAGATCAAACCAACCACAAAGGCTATCTCTGAAGGCTTGCGAAGAAGGAGAAGTTCATACACAAAACAAGGTGACAATTCTTCAAGGGA
CTTCGTTGGTGGCAACCGTTTGAATAGAAGAAATATGGTGGTGATACACCTTACAGTTGCCCTTGTTGCTACAACCCAGACCTTGAGCAACATTGATCTGAGCACCCGAG
TTAGGTCTGTGCAAAATGTTGATGGTAGGAACATTTGGACCAAAGATCTTTCTGCTTCATTTAATACATTGGAGGAACTGGCTGCCATTGTGGGTAAAGCTCTTCACACT
GCTATTGACCTTATCAATGAAAGCAAATTGGACAATGAAATCAAATCATGGCTAGATTTTGCTGCTCAAGAGATTGTTGAAGTTAATGCATTGGCAAAGGCTTTCATTGG
TCAAAAGGATGAGATCCACAATGTTTTGGACATTAAGGTTGGAAACTTAGCATTGTTTCTTGAACGTTCTTCCCATGTGGATCAACTTGAGAGCAAAGTTAATCCAATTT
TAAACAAGGTGATGAAGATTACTACGAATCGGGTGATGCCGAGGAGGAGGCCTGAGGAAGAATAA
Protein sequenceShow/hide protein sequence
MQFLSNKKIKPTTKAISEGLRRRRSSYTKQGDNSSRDFVGGNRLNRRNMVVIHLTVALVATTQTLSNIDLSTRVRSVQNVDGRNIWTKDLSASFNTLEELAAIVGKALHT
AIDLINESKLDNEIKSWLDFAAQEIVEVNALAKAFIGQKDEIHNVLDIKVGNLALFLERSSHVDQLESKVNPILNKVMKITTNRVMPRRRPEEE