| GenBank top hits | e value | %identity | Alignment |
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| KAA3490037.1 reverse transcriptase [Gossypium australe] | 7.1e-44 | 32.37 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M P KAP +GF A F+Q+FW +G + CL +LN V D N T I LIPK + PK +S +RPISLCNV YKII KV+VNRM + +E I+E Q
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHECN----------------------------------ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCP
F+ R I DN+++ +E +P RGLRQGDPLSPYLFL+C+E S+++ R ++ G ++
Subjt: FVPGRSIFDNIIVGHECN----------------------------------ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCP
Query: EVSHLFFADDSLIFCRAPL-----------------------------------------NRLGYSDL--SFIGMSWLLD----KWS-------ILEDYV
++HLFFADD ++F A NR+ D+ S+ +S L+D W+ + E+
Subjt: EVSHLFFADDSLIFCRAPL-----------------------------------------NRLGYSDL--SFIGMSWLLD----KWS-------ILEDYV
Query: KLIATIPISASDEDDKWIWHYTLNGEYSVKSGYKLLMSTA--LNLESSSHNRQRTWWDRLWKTKIPSKIKLSFGRLIVNV
I +IPI+ S +D +W + +G Y+VKSGY++L ++ N+ SS+ + ++ L IP KIK+ RL N+
Subjt: KLIATIPISASDEDDKWIWHYTLNGEYSVKSGYKLLMSTA--LNLESSSHNRQRTWWDRLWKTKIPSKIKLSFGRLIVNV
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| KAF5445283.1 hypothetical protein F2P56_034346 [Juglans regia] | 2.6e-46 | 51.91 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M+P +P PNGFP+ F QK W GD L+ LN RS+++ N T+ITLIPK SP +V +YRPISLCNV YK++ K + NR+K + +II+ NQS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
FVPGR I DN +V +E P RGLRQGDPLSPYLF+LC+E LSS++ L + + +V+HLFFADDSL+FC+A
Subjt: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
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| XP_018823372.2 uncharacterized protein LOC108993057 [Juglans regia] | 5.4e-44 | 51.91 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M+P +P P+GFPA FYQK W +GD L+ LN + D N TYI+LIPK SP KV++YRPISLCNV YKI+ K I NR+K + +II+ NQS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
FVP R I DN ++ P RGLRQGDPLSPYLF+LC++ L+S++N L + V+HLFFADDSL+FCRA
Subjt: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
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| XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber] | 3.5e-43 | 41.5 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNC-LEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQS
MHP+KAP P+G +FYQK+W EI D ++ C L +LN N TYI LIPK +SP+K++ +RPISLCNV YKII KV+ NR+KGV +E+I E+QS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNC-LEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQS
Query: TFVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDP
FVPGRSI DN++V E I P RGLRQGDP
Subjt: TFVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDP
Query: LSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
+SPYLFLLC+E LS+M+ L G+ ++ P VSHL FADDS+IFCRA
Subjt: LSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
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| XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber] | 4.1e-44 | 38.1 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
MHP+KAP P+G A+F+QK+W +G+ + L++LN S+ + N T ITL+PK +P K+S++RPISLCNV YK+I KV+ NR+K + +IISENQS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDPL
F+ GR I DN++V E +ITP RGLRQGDP+
Subjt: FVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDPL
Query: SPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
SPY+FLLC++ SS++N V + ++ G+ + CP+++HLFFADDSL+FC+A
Subjt: SPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I4EVF9 uncharacterized protein LOC108993057 | 2.6e-44 | 51.91 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M+P +P P+GFPA FYQK W +GD L+ LN + D N TYI+LIPK SP KV++YRPISLCNV YKI+ K I NR+K + +II+ NQS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
FVP R I DN ++ P RGLRQGDPLSPYLF+LC++ L+S++N L + V+HLFFADDSL+FCRA
Subjt: FVPGRSIFDNIIVGHECNITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRA
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| A0A2N9GC56 Reverse transcriptase domain-containing protein | 2.2e-43 | 40.31 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M P+KAP P+G P +FYQ FW +IG T LE LNQ S+ N T++ LIPK SP V+ YRPISLCNV YK++ K + NR+KGV IIS+NQS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDPL
FVPGR I DNI+V E I P RGLRQGDPL
Subjt: FVPGRSIFDNIIVGHEC---------------------------------------------------------------------NITPQRGLRQGDPL
Query: SPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRAPLNRLG
SPYLFLLC E LS++++ +L G+ ++ P++SHLFFADDSL+FC A + G
Subjt: SPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRAPLNRLG
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| A0A5B6XAZ1 Reverse transcriptase | 3.4e-44 | 32.37 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M P KAP +GF A F+Q+FW +G + CL +LN V D N T I LIPK + PK +S +RPISLCNV YKII KV+VNRM + +E I+E Q
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHECN----------------------------------ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCP
F+ R I DN+++ +E +P RGLRQGDPLSPYLFL+C+E S+++ R ++ G ++
Subjt: FVPGRSIFDNIIVGHECN----------------------------------ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCP
Query: EVSHLFFADDSLIFCRAPL-----------------------------------------NRLGYSDL--SFIGMSWLLD----KWS-------ILEDYV
++HLFFADD ++F A NR+ D+ S+ +S L+D W+ + E+
Subjt: EVSHLFFADDSLIFCRAPL-----------------------------------------NRLGYSDL--SFIGMSWLLD----KWS-------ILEDYV
Query: KLIATIPISASDEDDKWIWHYTLNGEYSVKSGYKLLMSTA--LNLESSSHNRQRTWWDRLWKTKIPSKIKLSFGRLIVNV
I +IPI+ S +D +W + +G Y+VKSGY++L ++ N+ SS+ + ++ L IP KIK+ RL N+
Subjt: KLIATIPISASDEDDKWIWHYTLNGEYSVKSGYKLLMSTA--LNLESSSHNRQRTWWDRLWKTKIPSKIKLSFGRLIVNV
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| A0A803P3Q4 Uncharacterized protein | 9.6e-47 | 34.22 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M K+P +G +FY W +GD L +LN+ +N T +T IPK P + ++RPISLCNV YK+I K+IV R K V ++S+ QS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIVGHEC--------------------------------------NITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKAN
F+P R I DN+++ E +ITPQRGLRQGDPLSPYLFL+CSE LS ++ +L G +
Subjt: FVPGRSIFDNIIVGHEC--------------------------------------NITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKAN
Query: KHCPEVSHLFFADDSLIFCRAPLNRLGY---------------SDLSFIGMSWLLDKWSILEDYVKLIATIPISASDE-----DDKWIWHYTLNGEYSVK
+ P +SHLFFADDSL+FC+A G +L MS+ + + ++ + I +PIS E +WIWH+T EYSV+
Subjt: KHCPEVSHLFFADDSLIFCRAPLNRLGY---------------SDLSFIGMSWLLDKWSILEDYVKLIATIPISASDE-----DDKWIWHYTLNGEYSVK
Query: SGYKLLMSTALNLESSSHNRQRTWWDRLWKTKIPSKIKL
+ Y + S+ Q TWW W K+PSK+K+
Subjt: SGYKLLMSTALNLESSSHNRQRTWWDRLWKTKIPSKIKL
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| Q94H40 Putative reverse transcriptase | 2.9e-43 | 45.63 | Show/hide |
Query: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQSTFVPG
KAP P+G A+FY++FW + + L+ +N ++ WN T + +IPK + P +V+ +RPISLCNV YKII K++ NR+K + EIIS+ QS FVPG
Subjt: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQSTFVPG
Query: RSIFDNIIVGHEC------------------------NITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIF
R I DN++V +EC I P RGLRQGDPLSPYLFLL +E LSSM+ G R L+GI+ + P +SHL FADDSLI
Subjt: RSIFDNIIVGHEC------------------------NITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIF
Query: CRAPLN
+A N
Subjt: CRAPLN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 2.5e-07 | 33.33 | Show/hide |
Query: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQSTFVP
K+P P+GF A FYQ++ E+ + I + + I LIPK K N+RPISL N+ KI+ K++ NR++ +++I +Q F+P
Subjt: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQSTFVP
Query: GRSIFDNI
G + NI
Subjt: GRSIFDNI
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| P08548 LINE-1 reverse transcriptase homolog | 3.4e-09 | 37.84 | Show/hide |
Query: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTY---ITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
K+P P+GF + FYQ F E+ +LN + + + + N Y ITLIPK P + NYRPISL N+ KI+ K++ NR++ ++II +Q
Subjt: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTY---ITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNI
F+PG + NI
Subjt: FVPGRSIFDNI
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.1e-12 | 28.85 | Show/hide |
Query: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTY---ITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
K+P P+GF A FYQ F ++ IL+ L +V N Y ITLIPK P K+ N+RPISL N+ KI+ K++ NR++ + II +Q
Subjt: KAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTY---ITLIPK-SNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPG--------------------------------RSIFDNI----------------------------------IVGHECNITP-QRGLRQGDPLSP
F+PG FD I + G + P + G RQG PLSP
Subjt: FVPG--------------------------------RSIFDNI----------------------------------IVGHECNITP-QRGLRQGDPLSP
Query: YLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRAPLN
YLF + EVL+ I +K++ GI+ K EV ADD +++ P N
Subjt: YLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDSLIFCRAPLN
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 7.4e-12 | 33.63 | Show/hide |
Query: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
M +K+P +G F+Q FW +G E + ++L+PK + + N+RP+SL + YKI+ K I R+K V E+I +QS
Subjt: MHPSKAPRPNGFPALFYQKFWAEIGDTTILNCLEILNQVRSVADWNCTYITLIPKSNSPKKVSNYRPISLCNVAYKIIVKVIVNRMKGVFQEIISENQST
Query: FVPGRSIFDNIIV
VPGR+IFDN+ +
Subjt: FVPGRSIFDNIIV
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| P92555 Uncharacterized mitochondrial protein AtMg01250 | 6.7e-13 | 54.24 | Show/hide |
Query: ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDS
+TP RGLRQGDPLSPYLF+LC+EVLS + + +L GI+ + + P ++HL FADD+
Subjt: ITPQRGLRQGDPLSPYLFLLCSEVLSSMINGVVLRKQLMGIKANKHCPEVSHLFFADDS
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