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Lag0038924 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038924
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:31019025..31019948
RNA-Seq ExpressionLag0038924
SyntenyLag0038924
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]7.1e-1531.97Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCP--IQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW
        MA  LG+VIG VEEV     G+  GP +R+R+ +D+++PL++++ L++  E     P  + YERLP+FCF CGR+GH +REC+        +    +G W
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCP--IQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW

Query:  LCALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRGRDSSDVGE
        L A+ +   ++++   +  +T+  G             GR+    G+
Subjt:  LCALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRGRDSSDVGE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.1e-2343.07Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDWLC
        MA  LG+ +G VEE+ G+G   WAGP +RVRV +DV++PLRR ++L+ S  +  WCP++YE+LP+FC+ CG++GHS REC      +   S   +GDWL 
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDWLC

Query:  ALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRG
        A  LK    ++V    EE    G    +G     GRG
Subjt:  ALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.8e-1349.37Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRE
        MA+ LG+ +G VEEV G    DW  P + VRV ++V +PLRR ++++ S  +  WCP++YERLP+FC+ CG +GHS RE
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRE

XP_024042186.1 uncharacterized protein LOC112099228 [Citrus clementina]6.0e-1436.8Show/hide
Query:  LGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHREC-SVEEVPIGRESRFPFGDWLCALP
        LG  IG VEEV  +G GD  G   R+RV++++T+PL R++ L++  E     P+ YERLP+FC+ CG +GH ++EC   ++ P   +   P+G W+ A+ 
Subjt:  LGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHREC-SVEEVPIGRESRFPFGDWLCALP

Query:  LKRPVQRTVGDEGEETEGVGEHMHK
        +    +R   ++G    GVG+   K
Subjt:  LKRPVQRTVGDEGEETEGVGEHMHK

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]5.5e-1530.96Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQ--YERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW
        M  ALG  IG VEEV  +  G+  G  +R+R+ +D+TRPL++++ L++  +     P+Q  YERLP+FCF CGR+GH +REC+        +    +G W
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQ--YERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW

Query:  LCALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRGRDSSDVGERTRETVVGTGVGCGLEKGPVIDTGSSGLVVDQPLVSPQSAIVVSSSVVVP
        L A  +   ++++ G +  ++     H +        R R++S V ER +               P  D GS+  ++D  L + + A   S  VV P
Subjt:  LCALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRGRDSSDVGERTRETVVGTGVGCGLEKGPVIDTGSSGLVVDQPLVSPQSAIVVSSSVVVP

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)2.2e-1440.78Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCP--IQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW
        MA  LG VIG VEEV  +  G+  G  +R+R+ +D+T+PL++++ L++  E     P  + YERLP+FCF CGR+GH +REC   +     +    +G W
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCP--IQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDW

Query:  LCA
        L A
Subjt:  LCA

A0A5C7GZQ4 CCHC-type domain-containing protein8.5e-1443.69Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAE-RFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRES-RFPFGDW
        + R LGS+IG V+E+   G GD  G  +RVRVV+DVT+PLRR++R+    + +     ++YERLP+ C+ CGR+GH  R+CS+    +  E     FG W
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAE-RFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRES-RFPFGDW

Query:  LCA
        L A
Subjt:  LCA

A0A5C7H214 CCHC-type domain-containing protein8.5e-1441.22Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRL------QESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIG-RESRF
        + R LG +IG V+E+   G GD AG  +RVRVV++V +PLRR++R+       ESA   R     YERLPE CF CG +GH  R+C  +    G ++   
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRL------QESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIG-RESRF

Query:  PFGDWLCALPLKRPVQ-RTVGDEGEETEGVG
         FG WL A  L +  Q R  GD  +   G G
Subjt:  PFGDWLCALPLKRPVQ-RTVGDEGEETEGVG

A0A6J1D765 uncharacterized protein LOC1110179025.3e-2443.07Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDWLC
        MA  LG+ +G VEE+ G+G   WAGP +RVRV +DV++PLRR ++L+ S  +  WCP++YE+LP+FC+ CG++GHS REC      +   S   +GDWL 
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDWLC

Query:  ALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRG
        A  LK    ++V    EE    G    +G     GRG
Subjt:  ALPLKRPVQRTVGDEGEETEGVGEHMHKGRDKGMGRG

A0A6J1DVS4 uncharacterized protein LOC1110235558.5e-1449.37Show/hide
Query:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRE
        MA+ LG+ +G VEEV G    DW  P + VRV ++V +PLRR ++++ S  +  WCP++YERLP+FC+ CG +GHS RE
Subjt:  MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGAGCTCTTGGCAGCGTTATTGGTCCGGTTGAGGAGGTGGCAGGGGAAGGCTGTGGGGACTGGGCGGGACCGATCATGAGGGTTCGAGTTGTGTTGGATGTCAC
GAGGCCGTTGCGCCGAGTGGTACGTTTGCAAGAGAGTGCAGAGAGGTTTAGGTGGTGCCCAATCCAGTATGAACGCCTTCCTGAATTTTGTTTCAGTTGTGGGCGTATGG
GCCATTCTCACCGGGAGTGTTCTGTAGAAGAGGTACCAATTGGGCGTGAGAGTCGCTTTCCTTTTGGGGATTGGCTTTGTGCTCTGCCTCTCAAACGGCCAGTGCAGAGG
ACTGTGGGGGACGAAGGTGAGGAGACGGAGGGGGTGGGGGAGCATATGCATAAGGGTCGGGATAAGGGTATGGGGCGAGGGCGTGATAGTTCGGATGTGGGGGAGAGGAC
TCGGGAGACGGTTGTTGGGACTGGGGTTGGGTGTGGTTTAGAGAAGGGGCCAGTCATAGACACGGGGTCCTCTGGTCTAGTTGTAGATCAGCCTTTAGTGTCCCCTCAGA
GTGCAATTGTGGTTTCTTCTTCGGTTGTTGTACCCTCTACGCTAAATAAGGGGAAGGAGATGGTAGTGGATCAACCACCATTGTCTGCACCTGAGAGTGTTGTTGTGGCT
CCCCCTGCTTTTGTTTCGCGTAGGAAAGGGAGGAAAAGGTTGGCACGTGAAACTCTGAAGGATGTGACGAATGTAATGGAGCATGTGTCGTGCGCACATAAGAGGGGCAA
TCCAATGAGCGAGGGTGTGGGTGTTGTGAGCGAGGGAATGGGTGGTGAGAAGGGTGGGAAGCGTAGAAAAGGGCAGGATGTAGTGGGAAGGGTTGGAGTATTAGATGATC
TGATTTTGGCGGAGGCTGGCTCACAGCCCCGCCCAGAGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGAGCTCTTGGCAGCGTTATTGGTCCGGTTGAGGAGGTGGCAGGGGAAGGCTGTGGGGACTGGGCGGGACCGATCATGAGGGTTCGAGTTGTGTTGGATGTCAC
GAGGCCGTTGCGCCGAGTGGTACGTTTGCAAGAGAGTGCAGAGAGGTTTAGGTGGTGCCCAATCCAGTATGAACGCCTTCCTGAATTTTGTTTCAGTTGTGGGCGTATGG
GCCATTCTCACCGGGAGTGTTCTGTAGAAGAGGTACCAATTGGGCGTGAGAGTCGCTTTCCTTTTGGGGATTGGCTTTGTGCTCTGCCTCTCAAACGGCCAGTGCAGAGG
ACTGTGGGGGACGAAGGTGAGGAGACGGAGGGGGTGGGGGAGCATATGCATAAGGGTCGGGATAAGGGTATGGGGCGAGGGCGTGATAGTTCGGATGTGGGGGAGAGGAC
TCGGGAGACGGTTGTTGGGACTGGGGTTGGGTGTGGTTTAGAGAAGGGGCCAGTCATAGACACGGGGTCCTCTGGTCTAGTTGTAGATCAGCCTTTAGTGTCCCCTCAGA
GTGCAATTGTGGTTTCTTCTTCGGTTGTTGTACCCTCTACGCTAAATAAGGGGAAGGAGATGGTAGTGGATCAACCACCATTGTCTGCACCTGAGAGTGTTGTTGTGGCT
CCCCCTGCTTTTGTTTCGCGTAGGAAAGGGAGGAAAAGGTTGGCACGTGAAACTCTGAAGGATGTGACGAATGTAATGGAGCATGTGTCGTGCGCACATAAGAGGGGCAA
TCCAATGAGCGAGGGTGTGGGTGTTGTGAGCGAGGGAATGGGTGGTGAGAAGGGTGGGAAGCGTAGAAAAGGGCAGGATGTAGTGGGAAGGGTTGGAGTATTAGATGATC
TGATTTTGGCGGAGGCTGGCTCACAGCCCCGCCCAGAGTTATGA
Protein sequenceShow/hide protein sequence
MARALGSVIGPVEEVAGEGCGDWAGPIMRVRVVLDVTRPLRRVVRLQESAERFRWCPIQYERLPEFCFSCGRMGHSHRECSVEEVPIGRESRFPFGDWLCALPLKRPVQR
TVGDEGEETEGVGEHMHKGRDKGMGRGRDSSDVGERTRETVVGTGVGCGLEKGPVIDTGSSGLVVDQPLVSPQSAIVVSSSVVVPSTLNKGKEMVVDQPPLSAPESVVVA
PPAFVSRRKGRKRLARETLKDVTNVMEHVSCAHKRGNPMSEGVGVVSEGMGGEKGGKRRKGQDVVGRVGVLDDLILAEAGSQPRPEL