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Lag0038932 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038932
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase BRE1A-like
Genome locationchr2:31190840..31191662
RNA-Seq ExpressionLag0038932
SyntenyLag0038932
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600783.1 hypothetical protein SDJN03_06016, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0780Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
XP_022942423.1 uncharacterized protein LOC111447471 isoform X1 [Cucurbita moschata]1.8e-0780Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
XP_022985783.1 uncharacterized protein LOC111483719 isoform X3 [Cucurbita maxima]1.8e-0780Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
XP_023545768.1 uncharacterized protein LOC111805103 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-0780Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
XP_023545790.1 uncharacterized protein LOC111805103 isoform X4 [Cucurbita pepo subsp. pepo]1.8e-0780Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
TrEMBL top hitse value%identityAlignment
A0A5A7SS70 E3 ubiquitin-protein ligase BRE1A-like5.3e-0567.5Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P  GH G  A HP+DKIAFNSE+NDLLHS  SVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
A0A6J1FUS8 uncharacterized protein LOC111447471 isoform X18.7e-0880Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
A0A6J1FWA5 uncharacterized protein LOC111447471 isoform X38.7e-0880Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
A0A6J1J957 uncharacterized protein LOC111483719 isoform X18.7e-0880Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
A0A6J1JEM7 uncharacterized protein LOC111483719 isoform X38.7e-0880Show/hide
Query:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
        L   P IGH GAPALHPE KIAFNSE+NDLLHS RSVSDS
Subjt:  LRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATTTGCTCTGCCTTTGCGTTAAAACCGAAGGTGACTGGTTTGATTTGGAGATATGGATATCTCTTCTCGCGTGGAGATATGGTTTCCACAGTTGATTATGTAAA
GAACCGTGGGATCGGATTTCTTCCCTCTTCTTCTGGATATTTCATCATGTCACTGAAATGTCCTGCATTTTTCTTAAGAATTGATCCTGGCATTGGTCATTTTGGCGCTC
CAGCTCTCCATCCTGAAGATAAGATAGCATTTAATTCTGAAGTGAATGATCTATTACATAGTCTGCGTTCTGTCTCTGATTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATTTGCTCTGCCTTTGCGTTAAAACCGAAGGTGACTGGTTTGATTTGGAGATATGGATATCTCTTCTCGCGTGGAGATATGGTTTCCACAGTTGATTATGTAAA
GAACCGTGGGATCGGATTTCTTCCCTCTTCTTCTGGATATTTCATCATGTCACTGAAATGTCCTGCATTTTTCTTAAGAATTGATCCTGGCATTGGTCATTTTGGCGCTC
CAGCTCTCCATCCTGAAGATAAGATAGCATTTAATTCTGAAGTGAATGATCTATTACATAGTCTGCGTTCTGTCTCTGATTCGTGA
Protein sequenceShow/hide protein sequence
MLICSAFALKPKVTGLIWRYGYLFSRGDMVSTVDYVKNRGIGFLPSSSGYFIMSLKCPAFFLRIDPGIGHFGAPALHPEDKIAFNSEVNDLLHSLRSVSDS