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Lag0038933 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038933
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:31217780..31220156
RNA-Seq ExpressionLag0038933
SyntenyLag0038933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022883096.1 uncharacterized protein LOC111399835 [Olea europaea var. sylvestris]9.2e-1033.33Show/hide
Query:  RVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYE
        RV+  +  L+ F    K  +   +     GS+ +W EM+ LFL++Y+L +   +  + I    Q + E  HE+ + F    +  P+  + E+ LI+ FYE
Subjt:  RVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYE

Query:  GLTPSDKRMLDSASGGDVLTKTL
        GL P+D+ M+D+ASGG ++ KTL
Subjt:  GLTPSDKRMLDSASGGDVLTKTL

XP_023895404.1 uncharacterized protein LOC112007302 [Quercus suber]3.5e-0933.59Show/hide
Query:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL
        PTG +E  +++K+    F    K  +   +     GSI +W EM+ LFL++Y+L +      + I    Q   E  HE+ + F    +  P+  + E+ L
Subjt:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL

Query:  IESFYEGLTPSDKRMLDSASGGDVLTKT
        I+ FYEGL P+D+ M+D+ASGG ++ KT
Subjt:  IESFYEGLTPSDKRMLDSASGGDVLTKT

XP_030940156.1 uncharacterized protein LOC115965094 [Quercus lobata]2.7e-0933.61Show/hide
Query:  RVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYE
        RV   +  L+ F    K+L+   +     GSI +W EM+ LFL++Y+  +      + I    Q   E  HE+ + F    +  P+  + E+ LI+ FYE
Subjt:  RVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYE

Query:  GLTPSDKRMLDSASGGDVLTKT
        GL P D+ M+D ASGG ++ KT
Subjt:  GLTPSDKRMLDSASGGDVLTKT

XP_038974507.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113461654 [Phoenix dactylifera]2.7e-0932.81Show/hide
Query:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL
        PTG +E  ++    L+ F    K  +   +     GSI  W EM+ LFL++Y+  +      + I    Q   E  HE+ +HF    +  P+  + E+ L
Subjt:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL

Query:  IESFYEGLTPSDKRMLDSASGGDVLTKT
        I+ FYEGL P+++ M+D+ASGG ++ KT
Subjt:  IESFYEGLTPSDKRMLDSASGGDVLTKT

XP_038978941.1 uncharacterized protein LOC120109260, partial [Phoenix dactylifera]2.7e-0932.81Show/hide
Query:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVG-YSVVPYTPLLEESL
        PTG +E  ++    L+ F    K  +   +     GSI  W EM+ LFL++Y+  +      + I    Q   E  HE+ + F   Y+  P+  + E+ L
Subjt:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVG-YSVVPYTPLLEESL

Query:  IESFYEGLTPSDKRMLDSASGGDVLTKT
        I+ FYEGL P+++ M+D+ASGG ++ KT
Subjt:  IESFYEGLTPSDKRMLDSASGGDVLTKT

TrEMBL top hitse value%identityAlignment
A0A0J8BAH8 Retrotrans_gag domain-containing protein3.2e-0837.63Show/hide
Query:  GSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKT
        GSI +W +M+  FL+RY+  +L +   + I   TQ   E  HE+ + F    +  P   + E+ L++ FYEGLT  D+ M+D+ASGG ++ KT
Subjt:  GSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKT

A0A1U7YY93 uncharacterized protein LOC1045883492.5e-0834.91Show/hide
Query:  KHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYEGLTPSDKRMLDSASGG
        K  +  C      GS+ +W EM  LFL++Y+  +      + I    Q   E  HE+ + F    +  P+  + E+ LI+ FYEGL P+DK M+D+ASGG
Subjt:  KHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESLIESFYEGLTPSDKRMLDSASGG

Query:  DVLTKT
         ++ KT
Subjt:  DVLTKT

A0A1U8QA90 uncharacterized protein LOC1046118136.5e-0932.03Show/hide
Query:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL
        PTG +E  ++    L+ F    K  +   +     GSI +W E++ LFL++Y+  +      + I    Q   E  HE+ + F    +  P+  + E+ L
Subjt:  PTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGY-SVVPYTPLLEESL

Query:  IESFYEGLTPSDKRMLDSASGGDVLTKT
        I+ FYEGL P+D+ M+D+ASGG ++ KT
Subjt:  IESFYEGLTPSDKRMLDSASGGDVLTKT

A0A6P6X3B1 uncharacterized protein LOC1137389335.5e-0836.08Show/hide
Query:  GSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGYSV-VPYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKTLGVA
        GSI +W E++  FL++++  +      + I    QA  EV +E+ + F    V  P+  + ++ LI+ FYEGL+P D+ MLD+ASGG ++ KT+  A
Subjt:  GSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGYSV-VPYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKTLGVA

A0A6P9EUE7 uncharacterized protein LOC1090102795.5e-0836.96Show/hide
Query:  SIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGYSVV-PYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKT
        SI +W EM+ LFL++Y+  +      + I    Q  EE  H + +HF       P+  + E+ LI+ FYEGL P+D+ ++D+ASGG ++ KT
Subjt:  SIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGYSVV-PYTPLLEESLIESFYEGLTPSDKRMLDSASGGDVLTKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAACCTCGAACAGGTCCATTAGGTCCCACTGGTAGCTCAGAAAGGGTATTGAGGGTCAAAAGTGCACTGCAAGTCTTCTTTTCAGGTCATAAGCATCTTTCGCC
TCCCTGCATTGTTAATCCCAAAGAAGGATCAATAGCCTCCTGGTGCGAGATGAGGGATCTTTTCTTGAAGAGGTACTATTTGGTCGCTCTGTTCATTGAAGCCACCGAGA
GAATTATCAACACCACACAAGCGACAGAGGAAGTGTTCCATGAGTTCTTGGATCACTTTGTTGGTTACTCTGTTGTTCCTTACACTCCATTGCTCGAAGAATCCTTGATA
GAGAGCTTCTACGAAGGGTTAACACCTAGCGATAAAAGGATGCTCGATTCAGCGAGTGGTGGTGATGTGCTTACCAAAACACTTGGTGTGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAACCTCGAACAGGTCCATTAGGTCCCACTGGTAGCTCAGAAAGGGTATTGAGGGTCAAAAGTGCACTGCAAGTCTTCTTTTCAGGTCATAAGCATCTTTCGCC
TCCCTGCATTGTTAATCCCAAAGAAGGATCAATAGCCTCCTGGTGCGAGATGAGGGATCTTTTCTTGAAGAGGTACTATTTGGTCGCTCTGTTCATTGAAGCCACCGAGA
GAATTATCAACACCACACAAGCGACAGAGGAAGTGTTCCATGAGTTCTTGGATCACTTTGTTGGTTACTCTGTTGTTCCTTACACTCCATTGCTCGAAGAATCCTTGATA
GAGAGCTTCTACGAAGGGTTAACACCTAGCGATAAAAGGATGCTCGATTCAGCGAGTGGTGGTGATGTGCTTACCAAAACACTTGGTGTGGCATGA
Protein sequenceShow/hide protein sequence
MVEPRTGPLGPTGSSERVLRVKSALQVFFSGHKHLSPPCIVNPKEGSIASWCEMRDLFLKRYYLVALFIEATERIINTTQATEEVFHEFLDHFVGYSVVPYTPLLEESLI
ESFYEGLTPSDKRMLDSASGGDVLTKTLGVA