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Lag0038942 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038942
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB3 domain-containing transcription factor LEC2-like
Genome locationchr2:31419955..31420359
RNA-Seq ExpressionLag0038942
SyntenyLag0038942
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594597.1 B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1239.67Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK ++E+D+L Q PC                                       N+NN   +  FEDCFG L
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL

Query:  DTLLEVSGFKFLLFDCLNNDR
        + L EVSGFKF + D L NDR
Subjt:  DTLLEVSGFKFLLFDCLNNDR

XP_022926805.1 B3 domain-containing transcription factor LEC2-like [Cucurbita moschata]6.2e-1239.67Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK ++E+D+L Q PC                                       N+NN   +  FEDCFG L
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL

Query:  DTLLEVSGFKFLLFDCLNNDR
        + L EVSGFKF + D L NDR
Subjt:  DTLLEVSGFKFLLFDCLNNDR

XP_022978701.1 B3 domain-containing transcription factor LEC2 isoform X2 [Cucurbita maxima]2.0e-1037.41Show/hide
Query:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------
        +N + +    ++TNM IKDEEE+ASLA+LIEELK K E++D                NNNNN                                      
Subjt:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------

Query:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT
                     A+NG EDCF GLDTL EVSGFKF LFD L+NDRT
Subjt:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT

XP_023003348.1 B3 domain-containing transcription factor LEC2-like [Cucurbita maxima]3.3e-1342.02Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-------------------------------------NNNNNLAINGFEDCFGGLDT
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK K+E+D+L Q PC                                     N+NN   + GFEDCFG L+ 
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-------------------------------------NNNNNLAINGFEDCFGGLDT

Query:  LLEVSGFKFLLFDCLNNDR
        L EVSGFKF + D L NDR
Subjt:  LLEVSGFKFLLFDCLNNDR

XP_023518478.1 B3 domain-containing transcription factor LEC2-like [Cucurbita pepo subsp. pepo]4.3e-1341.88Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-----------------------------------NNNNNLAINGFEDCFGGLDTLL
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK ++E+D+L Q PC                                   N+NN   + GFEDCFG L+ L 
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-----------------------------------NNNNNLAINGFEDCFGGLDTLL

Query:  EVSGFKFLLFDCLNNDR
        EVSGFKF + D L NDR
Subjt:  EVSGFKFLLFDCLNNDR

TrEMBL top hitse value%identityAlignment
A0A5A7UBY7 B3 domain-containing transcription factor LEC28.1e-1048.42Show/hide
Query:  IKDEEEEASLALLIEELKQKTEEDDLKQPP-------------------------------CNNNNNLAINGFEDCFGGLDTLLEVSGFKFLLFD
        +KDEEE+ASLALLIEELK K E+     PP                                NN+NN    GFEDCFGGLDTL EVSGFKF LFD
Subjt:  IKDEEEEASLALLIEELKQKTEEDDLKQPP-------------------------------CNNNNNLAINGFEDCFGGLDTLLEVSGFKFLLFD

A0A6J1EM52 B3 domain-containing transcription factor LEC2-like3.0e-1239.67Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK ++E+D+L Q PC                                       N+NN   +  FEDCFG L
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC---------------------------------------NNNNNLAINGFEDCFGGL

Query:  DTLLEVSGFKFLLFDCLNNDR
        + L EVSGFKF + D L NDR
Subjt:  DTLLEVSGFKFLLFDCLNNDR

A0A6J1IQY4 B3 domain-containing transcription factor LEC2 isoform X19.6e-1137.41Show/hide
Query:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------
        +N + +    ++TNM IKDEEE+ASLA+LIEELK K E++D                NNNNN                                      
Subjt:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------

Query:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT
                     A+NG EDCF GLDTL EVSGFKF LFD L+NDRT
Subjt:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT

A0A6J1IU08 B3 domain-containing transcription factor LEC2 isoform X29.6e-1137.41Show/hide
Query:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------
        +N + +    ++TNM IKDEEE+ASLA+LIEELK K E++D                NNNNN                                      
Subjt:  RNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDD----------LKQPPCNNNNNL-------------------------------------

Query:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT
                     A+NG EDCF GLDTL EVSGFKF LFD L+NDRT
Subjt:  -------------AINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT

A0A6J1KW90 B3 domain-containing transcription factor LEC2-like1.6e-1342.02Show/hide
Query:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-------------------------------------NNNNNLAINGFEDCFGGLDT
        ++  A+ Y NMNIKDEEE+ +LALLIE+LK K+E+D+L Q PC                                     N+NN   + GFEDCFG L+ 
Subjt:  SSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPC-------------------------------------NNNNNLAINGFEDCFGGLDT

Query:  LLEVSGFKFLLFDCLNNDR
        L EVSGFKF + D L NDR
Subjt:  LLEVSGFKFLLFDCLNNDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACCAACAATCATCAACAATAGCAACAACTTACACAAACATGAACATTAAGGACGAAGAAGAGGAAGCATCTTTAGCTCTGTTGATAGAAGAGCTGAAACAAAA
AACGGAAGAAGACGACCTGAAACAACCGCCCTGCAACAACAACAACAATCTGGCCATTAATGGCTTTGAAGATTGCTTTGGAGGCCTCGATACTCTGCTTGAAGTTAGTG
GATTCAAGTTCCTTCTTTTTGACTGCTTGAACAATGACAGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACCAACAATCATCAACAATAGCAACAACTTACACAAACATGAACATTAAGGACGAAGAAGAGGAAGCATCTTTAGCTCTGTTGATAGAAGAGCTGAAACAAAA
AACGGAAGAAGACGACCTGAAACAACCGCCCTGCAACAACAACAACAATCTGGCCATTAATGGCTTTGAAGATTGCTTTGGAGGCCTCGATACTCTGCTTGAAGTTAGTG
GATTCAAGTTCCTTCTTTTTGACTGCTTGAACAATGACAGAACATGA
Protein sequenceShow/hide protein sequence
MRNQQSSTIATTYTNMNIKDEEEEASLALLIEELKQKTEEDDLKQPPCNNNNNLAINGFEDCFGGLDTLLEVSGFKFLLFDCLNNDRT