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Lag0038954 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038954
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:31692176..31692538
RNA-Seq ExpressionLag0038954
SyntenyLag0038954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]1.5e-1335.61Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YHP LRNHE                        K +LE+ +  F++E K           N+++  +N    +KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE
        PS+TE NP+EQCK +TL+SGR++E    ++ E
Subjt:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE

XP_023881727.1 uncharacterized protein LOC111994101 [Quercus suber]5.8e-1336.29Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YHP LRNHE                        K +LE+ +  F++E K           N+++  +N    +KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLE
        PS+ E NP+EQCK +TL+SGR++E
Subjt:  PSDTETNPREQCKMVTLKSGRQLE

XP_023889786.1 uncharacterized protein LOC112001854 [Quercus suber]3.1e-1436.36Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKV-------LNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YHP LRNHE                        K +LE+ +  F++E K        L  N+++  +N    +KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKV-------LNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE
        PS+TE NP+EQCK +TL+SGR++E+   ++ E
Subjt:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.2e-1335.61Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YHP LRNHE                        K +LE+ +  F++E K           N+++  +N    +KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE
        PS+TE NP+EQCK +TL+SGR++E+   ++ E
Subjt:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]3.4e-1335.61Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKV-------LNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YHP LRNHE                        K +LE+ +  F++E K           N+++  +N    +KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKV-------LNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE
        PS+TE NP+EQCK +TL+SGR++E    ++ E
Subjt:  PSDTETNPREQCKMVTLKSGRQLESHSDEKKE

TrEMBL top hitse value%identityAlignment
A0A2I4F4C8 uncharacterized protein LOC1089953731.3e-1048.24Show/hide
Query:  SLRNHEKSNLEEMVAMFIKEHKVLNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLE
        SL +   S +EE  A F K   +L+ N+ +  +N   A+KN+EVQIG++A+ +N+ Q+G FPS+TE+NP+EQCK +TLKS R+LE
Subjt:  SLRNHEKSNLEEMVAMFIKEHKVLNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLE

A0A2P5BPI6 Uncharacterized protein2.0e-1136.13Show/hide
Query:  YHPSLRNHE------------------------KSNLEEMVAMFIKE-HKVLNV------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTE
        Y+P LRNHE                        KS+LE++++ FI E  +  N       N+++  NN +  +K++EVQIG++A+++   Q GKFPSDTE
Subjt:  YHPSLRNHE------------------------KSNLEEMVAMFIKE-HKVLNV------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTE

Query:  TNPREQCKMVTLKSGRQLE
        TNP++ CK +TL++G+++E
Subjt:  TNPREQCKMVTLKSGRQLE

A0A6J1DU19 uncharacterized protein LOC1110243619.1e-1242.16Show/hide
Query:  HPSLRNHEKSNLEEMVAMFIKEHKVLNVNLQSAVNNHDI-------ALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLESHSDEK
        HP+    +KS+LE+++  FI E +     +++ V   ++       ++KNMEVQIG+IA  +N++QKGKFPSD E  PRE CK VTL+SG++L+    +K
Subjt:  HPSLRNHEKSNLEEMVAMFIKEHKVLNVNLQSAVNNHDI-------ALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLESHSDEK

Query:  KE
         E
Subjt:  KE

A0A6J1E1F6 uncharacterized protein LOC1110255517.7e-1154.55Show/hide
Query:  LQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLESHSDEKKE
        ++  +  +  A+KNMEVQIG++AS +N +QKGKFPSDTE NPRE CK VTL+SG++L+    +K E
Subjt:  LQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLESHSDEKKE

A0A6P9DWY0 uncharacterized protein LOC1183440261.1e-1237.1Show/hide
Query:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF
        P  N+YH  LRNHE                        K +LE+ +  F++E             N+++  +N   A+KN+EVQIG++A+ +N+ Q+G F
Subjt:  PFTNFYHPSLRNHE------------------------KSNLEEMVAMFIKEHKVLNV-------NLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKF

Query:  PSDTETNPREQCKMVTLKSGRQLE
        PS+TE NPREQCK +TL+SGR+L+
Subjt:  PSDTETNPREQCKMVTLKSGRQLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCACGAACTTCTACCATCCAAGTCTGCGCAATCATGAGAAAAGCAACTTGGAGGAAATGGTGGCCATGTTTATCAA
GGAACATAAAGTTTTGAATGTTAATCTCCAGTCAGCGGTAAATAACCACGACATAGCTCTCAAGAATATGGAAGTGCAAATAGGACGGATCGCTTCTGCAGTGAACTCCC
TTCAAAAAGGGAAGTTTCCAAGCGACACCGAAACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTTAAAAGTGGTAGACAACTGGAGAGCCACTCAGACGAAAAGAAG
GAGCTGAAGAAAGAAGCCGGTAGTCGGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCACGAACTTCTACCATCCAAGTCTGCGCAATCATGAGAAAAGCAACTTGGAGGAAATGGTGGCCATGTTTATCAA
GGAACATAAAGTTTTGAATGTTAATCTCCAGTCAGCGGTAAATAACCACGACATAGCTCTCAAGAATATGGAAGTGCAAATAGGACGGATCGCTTCTGCAGTGAACTCCC
TTCAAAAAGGGAAGTTTCCAAGCGACACCGAAACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTTAAAAGTGGTAGACAACTGGAGAGCCACTCAGACGAAAAGAAG
GAGCTGAAGAAAGAAGCCGGTAGTCGGAGGTAG
Protein sequenceShow/hide protein sequence
MRFRCVGTFIPFTNFYHPSLRNHEKSNLEEMVAMFIKEHKVLNVNLQSAVNNHDIALKNMEVQIGRIASAVNSLQKGKFPSDTETNPREQCKMVTLKSGRQLESHSDEKK
ELKKEAGSRR