; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038963 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038963
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:32019148..32020458
RNA-Seq ExpressionLag0038963
SyntenyLag0038963
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-16474.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]8.7e-17075.83Show/hide
Query:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF
        MYGIERLKKLGATVF+GSTDP D EV+LNMLEKCFDVMSCP+ERK +LATFLL KEAEGWWKSI+ARR+DA TLDWQTFRGI EEKYYPTTYCEAKRDEF
Subjt:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF

Query:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF
        L+LKQ SLSVA+YERKYTELS YA++I+ASESDRC RFERGLRFEIRTPVTAIAK  NFSQLV+T LRV+QSI+EEKSA+E SRG  T SG RGREQ RF
Subjt:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF

Query:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------
        TPGVNVSG QDFKRRSGG+  RQMSSGSAYQRQS+ A SQ A+ VAR RTGQESVASES+RT CV CG +H+G+C++G                      
Subjt:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------

Query:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE
                    VEQ R+S AA E TS ARQKGVVGRPRQ GKVYAMTQQEAEDAPDVI  TILICNVP RVLLD GATHSFVSSMFLTK+NRMLEPL E
Subjt:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE

Query:  ELVICTPVGDVLVVNEVLCDCE
        ELVICTPVGDVL+V+EVLCDCE
Subjt:  ELVICTPVGDVLVVNEVLCDCE

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-16474.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-17076.07Show/hide
Query:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF
        MYGIERLKKLGATVF+GSTDP D EV+LNMLEKCFDVMSCP+ERK +LATFLLQKEAEGWWKSI+ARR+DA TLDWQTFRGI EEKYYPTTYCEAKRDEF
Subjt:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF

Query:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF
        L+LKQ SLSVA+YERKYTELS YA++I+ASESDRC RFERGLRFEIRTPVTAIAK  NFSQLV+T LRV+QSI+EEKSA+E SRG  T SG RGREQ RF
Subjt:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF

Query:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------
        TPGVNVSG QDFKRRSGG+  RQMSSGSAYQRQS+ A SQ A+ VAR RTGQESVASES+RT CV CG +H+G+C++G                      
Subjt:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------

Query:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE
                    VEQ R+S AA E TS ARQKGVVGRPRQ GKVYAMTQQEAEDAPDVI  TILICNVP RVLLD GATHSFVSSMFLTK+NRMLEPL E
Subjt:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE

Query:  ELVICTPVGDVLVVNEVLCDCE
        ELVICTPVGDVL+V+EVLCDCE
Subjt:  ELVICTPVGDVLVVNEVLCDCE

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]1.4e-16474.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase4.2e-17075.83Show/hide
Query:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF
        MYGIERLKKLGATVF+GSTDP D EV+LNMLEKCFDVMSCP+ERK +LATFLL KEAEGWWKSI+ARR+DA TLDWQTFRGI EEKYYPTTYCEAKRDEF
Subjt:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF

Query:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF
        L+LKQ SLSVA+YERKYTELS YA++I+ASESDRC RFERGLRFEIRTPVTAIAK  NFSQLV+T LRV+QSI+EEKSA+E SRG  T SG RGREQ RF
Subjt:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF

Query:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------
        TPGVNVSG QDFKRRSGG+  RQMSSGSAYQRQS+ A SQ A+ VAR RTGQESVASES+RT CV CG +H+G+C++G                      
Subjt:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------

Query:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE
                    VEQ R+S AA E TS ARQKGVVGRPRQ GKVYAMTQQEAEDAPDVI  TILICNVP RVLLD GATHSFVSSMFLTK+NRMLEPL E
Subjt:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE

Query:  ELVICTPVGDVLVVNEVLCDCE
        ELVICTPVGDVL+V+EVLCDCE
Subjt:  ELVICTPVGDVLVVNEVLCDCE

A0A5A7U2V7 Reverse transcriptase6.9e-16574.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

A0A5D3BHI1 Reverse transcriptase6.9e-16574.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

A0A5D3BS67 Reverse transcriptase6.9e-16574.58Show/hide
Query:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL
        YGIERLKKLGATVF+GSTDP D E +LNMLEKCFDVM+CPEERK RLATFLLQKEAEGWWKSILARRSDA  LDWQTFRGI E+KYYP+TYCEAKRDEFL
Subjt:  YGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFL

Query:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT
         LKQGSLSVAEYERKYTELS YADVI+ASESDRCRRFERGLRFEIRTPVTAIAK TNFSQLV+T LRVEQSI EEKSAVE SRG  TASGFRGREQ RFT
Subjt:  KLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFT

Query:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------
        PG+N+S RQDFK RSGGQ SR +S GS +QRQSQ   SQ      R + GQES+AS  RR  C  CG NHRGQCLVG                       
Subjt:  PGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG-----------------------

Query:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE
                   +EQ RVS    EGTS ARQKGVVGRPRQ GKVYAMTQQE EDAPDVI GTILICNVPA VL DPGATHSFVSS+FLTKLNRMLEPL E 
Subjt:  ----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEE

Query:  LVICTPVGDVLVVNEVLCDCE
        L I TPVGDVL+VNEVL +CE
Subjt:  LVICTPVGDVLVVNEVLCDCE

A0A5D3BTP3 Reverse transcriptase6.5e-17176.07Show/hide
Query:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF
        MYGIERLKKLGATVF+GSTDP D EV+LNMLEKCFDVMSCP+ERK +LATFLLQKEAEGWWKSI+ARR+DA TLDWQTFRGI EEKYYPTTYCEAKRDEF
Subjt:  MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEF

Query:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF
        L+LKQ SLSVA+YERKYTELS YA++I+ASESDRC RFERGLRFEIRTPVTAIAK  NFSQLV+T LRV+QSI+EEKSA+E SRG  T SG RGREQ RF
Subjt:  LKLKQGSLSVAEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRF

Query:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------
        TPGVNVSG QDFKRRSGG+  RQMSSGSAYQRQS+ A SQ A+ VAR RTGQESVASES+RT CV CG +H+G+C++G                      
Subjt:  TPGVNVSGRQDFKRRSGGQLSRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVG----------------------

Query:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE
                    VEQ R+S AA E TS ARQKGVVGRPRQ GKVYAMTQQEAEDAPDVI  TILICNVP RVLLD GATHSFVSSMFLTK+NRMLEPL E
Subjt:  -----------VVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLE

Query:  ELVICTPVGDVLVVNEVLCDCE
        ELVICTPVGDVL+V+EVLCDCE
Subjt:  ELVICTPVGDVLVVNEVLCDCE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGATGGTTCCACAGATCCAGTTGACGTCGAGGTCTACTTAAATATGCTGGAGAAATGCTTCGACGT
GATGAGTTGTCCGGAGGAGCGAAAATTCAGATTGGCCACATTTCTTTTACAGAAGGAGGCGGAGGGATGGTGGAAATCTATTTTAGCCAGGCGTAGTGATGCACATACGT
TGGACTGGCAGACGTTCAGAGGCATATTAGAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGAAGCTGAAACAAGGGTCACTTTCAGTG
GCCGAGTACGAGAGGAAGTATACCGAGCTTTCATGGTATGCCGATGTGATTATGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAAAGAGGGTTGCGTTTTGAGATACG
TACCCCAGTTACCGCTATTGCCAAGCGGACGAATTTTTCCCAACTAGTAAAGACTACTTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGGCAGTGGAGCCTAGTC
GTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAATGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTA
TCGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGATAGCCCTCAGTCAGTCTGCGAGTTTTGTAGCAAGACCGCGAACGGGTCAGGAGTCCGTTGCTAG
TGAATCCAGGAGAACCTCATGTGTATGTTGTGGAATGAATCATCGGGGTCAATGTCTTGTTGGCGTCGTTGAGCAACTGAGAGTCTCAGCAGCTGCAAGAGAGGGCACCA
GTGTTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAACATGGAAAAGTCTATGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATCATTGGGACGATT
TTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATGTTTTTAACTAAGCTGAATAGGATGCTAGAGCCTTTATTAGA
GGAGTTAGTCATATGCACTCCAGTTGGTGACGTTTTAGTAGTCAATGAAGTATTGTGTGATTGTGAATATAGGGACGAGCATGAACCTCACGCTGTGAATATAGGGACGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGGATTGAACGGTTGAAGAAATTAGGAGCCACAGTGTTTGATGGTTCCACAGATCCAGTTGACGTCGAGGTCTACTTAAATATGCTGGAGAAATGCTTCGACGT
GATGAGTTGTCCGGAGGAGCGAAAATTCAGATTGGCCACATTTCTTTTACAGAAGGAGGCGGAGGGATGGTGGAAATCTATTTTAGCCAGGCGTAGTGATGCACATACGT
TGGACTGGCAGACGTTCAGAGGCATATTAGAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGAAGCTGAAACAAGGGTCACTTTCAGTG
GCCGAGTACGAGAGGAAGTATACCGAGCTTTCATGGTATGCCGATGTGATTATGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAAAGAGGGTTGCGTTTTGAGATACG
TACCCCAGTTACCGCTATTGCCAAGCGGACGAATTTTTCCCAACTAGTAAAGACTACTTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGGCAGTGGAGCCTAGTC
GTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAATGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTA
TCGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGATAGCCCTCAGTCAGTCTGCGAGTTTTGTAGCAAGACCGCGAACGGGTCAGGAGTCCGTTGCTAG
TGAATCCAGGAGAACCTCATGTGTATGTTGTGGAATGAATCATCGGGGTCAATGTCTTGTTGGCGTCGTTGAGCAACTGAGAGTCTCAGCAGCTGCAAGAGAGGGCACCA
GTGTTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAACATGGAAAAGTCTATGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATCATTGGGACGATT
TTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATGTTTTTAACTAAGCTGAATAGGATGCTAGAGCCTTTATTAGA
GGAGTTAGTCATATGCACTCCAGTTGGTGACGTTTTAGTAGTCAATGAAGTATTGTGTGATTGTGAATATAGGGACGAGCATGAACCTCACGCTGTGAATATAGGGACGT
AG
Protein sequenceShow/hide protein sequence
MYGIERLKKLGATVFDGSTDPVDVEVYLNMLEKCFDVMSCPEERKFRLATFLLQKEAEGWWKSILARRSDAHTLDWQTFRGILEEKYYPTTYCEAKRDEFLKLKQGSLSV
AEYERKYTELSWYADVIMASESDRCRRFERGLRFEIRTPVTAIAKRTNFSQLVKTTLRVEQSIIEEKSAVEPSRGAPTASGFRGREQWRFTPGVNVSGRQDFKRRSGGQL
SRQMSSGSAYQRQSQIALSQSASFVARPRTGQESVASESRRTSCVCCGMNHRGQCLVGVVEQLRVSAAAREGTSVARQKGVVGRPRQHGKVYAMTQQEAEDAPDVIIGTI
LICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLLEELVICTPVGDVLVVNEVLCDCEYRDEHEPHAVNIGT