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Lag0038991 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038991
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr2:32731480..32732371
RNA-Seq ExpressionLag0038991
SyntenyLag0038991
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]7.0e-1533.15Show/hide
Query:  NWVAEYLCQFKKFQ-GRKLMLV----GGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVA
        +WVA+YL  ++  Q G  L L+    GGR SA  W  P++  +K+N  A   +   ++ +  ++ D    V+L+ +  I  V DV   E +A ++ + +A
Subjt:  NWVAEYLCQFKKFQ-GRKLMLV----GGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVA

Query:  KEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDL-LDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE
         EAGL+  ++ETDS++V  LLR+D  DESE+GVL   I  +   L +    S+  R  NS  H   R  + +    VW+ E
Subjt:  KEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDL-LDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.1e-1233.33Show/hide
Query:  WLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVL
        W  P + L K+N  A   +++  + +G I+ D  G V LT ++L+    DVD +E  A+ + +++A EAG +  ++ETDS R+  LL +D VD+SEVGVL
Subjt:  WLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVL

Query:  VKEIGR-LARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE
           I   L+      S S+  R+ N+  H   + A+ +    +W+ E
Subjt:  VKEIGR-LARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE

XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]1.7e-1334.5Show/hide
Query:  EYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLK
        EYL +F++ Q  +L ++  R +A+ W+AP   +YKLN  A   ++   S IGAI+ + KGEVM  +    P V+D +  E +A R ++  A +AG   L 
Subjt:  EYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLK

Query:  VETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE
        +E D+A V+  L     D S +G +V+++  LA  L   S S  +R AN+  H   R A     + +WL E
Subjt:  VETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE

XP_023928118.1 uncharacterized protein LOC112039474 [Quercus suber]8.6e-1332.56Show/hide
Query:  WVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLL
        W  E+L +F + QG +L +         W  P  S +KLN  A    K   S +GA++ ++ GEVM T+L  +P V D    E +A R +M  A +AG  
Subjt:  WVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLL

Query:  SLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWL
         L VE D+  V+  L +   D S +G ++++I  L R     S S+ RR+ANS  +   R+A + + +  W+
Subjt:  SLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWL

XP_030963892.1 uncharacterized protein LOC115985062 [Quercus lobata]1.3e-1331.55Show/hide
Query:  YLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKV
        +L ++ + Q +  +L   ++ +  W  P S  YKLN  A        S +GAI+ +++GEVM  +    PFVQD +  E +A R ++  A + G+  L +
Subjt:  YLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKV

Query:  ETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWL
        E D+  V+  + S+ +D S +G ++++I  L R L   S+S  +RSAN+  H+ +R+A     E VW+
Subjt:  ETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWL

TrEMBL top hitse value%identityAlignment
A0A2N9GMM2 Uncharacterized protein7.8e-1227.67Show/hide
Query:  CPRCLKREETVFHAIWEWEEEGGWNWVAEYLCQFKKFQGRKLMLVGGRKSAD------QWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTV
        C  C  RE+++ HA+W          V + L +   F    L +  G+ +        +W  P S+ YK+N      +++ T  +G ++ D  G V+ T+
Subjt:  CPRCLKREETVFHAIWEWEEEGGWNWVAEYLCQFKKFQGRKLMLVGGRKSAD------QWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTV

Query:  LKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEG
         + I     V+ +EA+A R +++ AKE G+   + E D+  V+  L S     +  G+++++   + ++    SLS  RRS NS  HA  R A E N   
Subjt:  LKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEG

Query:  VWLGEL
        VW+ E+
Subjt:  VWLGEL

A0A5C7IIT4 Uncharacterized protein3.5e-1228.02Show/hide
Query:  NWVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGL
        +W A ++  FK  +      V  ++ A +W    S  YK+NT A  + + + + IG ++ D  G VM ++ +  P +    T+EA+A+     +A EAGL
Subjt:  NWVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGL

Query:  LSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGELSLGLRS
            +E+DS  VV L+ S  +  +E+GV++ +I  +  +    S+S+  R  N   H+  + ++    E VWL +  L + S
Subjt:  LSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGELSLGLRS

A0A6J1C467 uncharacterized protein LOC1110077753.4e-1533.15Show/hide
Query:  NWVAEYLCQFKKFQ-GRKLMLV----GGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVA
        +WVA+YL  ++  Q G  L L+    GGR SA  W  P++  +K+N  A   +   ++ +  ++ D    V+L+ +  I  V DV   E +A ++ + +A
Subjt:  NWVAEYLCQFKKFQ-GRKLMLV----GGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVA

Query:  KEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDL-LDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE
         EAGL+  ++ETDS++V  LLR+D  DESE+GVL   I  +   L +    S+  R  NS  H   R  + +    VW+ E
Subjt:  KEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDL-LDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE

A0A6J1CIF1 uncharacterized protein LOC1110112376.0e-1226.88Show/hide
Query:  WVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLL
        W  +Y+ +F++             +   WL P   +YK+NT A      Q + +G I+ + +G+VM +  K +  +Q VD  EA+   + + +A + G+ 
Subjt:  WVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLL

Query:  SLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGELSLGLRSRLNRE
         + +ETDS+R+  L      D SE G +V +        L  S ++ +R  N A H   R A+      +W+ +  L L+S L  E
Subjt:  SLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGELSLGLRSRLNRE

A0A6J1DBJ7 uncharacterized protein LOC1110189735.4e-1333.33Show/hide
Query:  WLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVL
        W  P + L K+N  A   +++  + +G I+ D  G V LT ++L+    DVD +E  A+ + +++A EAG +  ++ETDS R+  LL +D VD+SEVGVL
Subjt:  WLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDVDTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVL

Query:  VKEIGR-LARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE
           I   L+      S S+  R+ N+  H   + A+ +    +W+ E
Subjt:  VKEIGR-LARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGTCGGTTGGGTGCCCTAGGTGCTTGAAGAGGGAGGAGACCGTGTTCCACGCTATTTGGGAATGGGAGGAGGAAGGAGGTTGGAATTGGGTTGCTGAATACTT
ATGTCAGTTCAAGAAGTTTCAGGGAAGGAAGCTAATGTTGGTAGGGGGCCGAAAATCTGCTGATCAATGGTTGGCTCCGGTTTCCTCCTTGTACAAGCTGAATACATATG
CGGGGACAAACAGAAAGACCCAAACAAGTAGTATAGGTGCTATAGTGAGTGATAAGAAAGGGGAGGTAATGCTTACCGTGCTGAAATTGATTCCGTTTGTCCAAGATGTT
GATACGTTGGAAGCAATGGCAATCCGTGATTCGATGATGGTTGCGAAGGAAGCAGGGTTGCTATCGTTGAAGGTGGAGACCGACTCAGCCCGAGTTGTATTGCTGCTCAG
ATCAGATTTGGTGGACGAATCGGAAGTGGGAGTGTTGGTGAAGGAGATCGGGCGTTTGGCAAGAGATCTGCTCGATTGTTCGTTAAGCTGGTGCCGGAGGAGTGCAAATT
CAGCGACGCACGCGGCGACGAGATGGGCGATTGAAGCGAATGTTGAAGGTGTGTGGCTTGGGGAGTTGTCGTTAGGGCTTCGGTCTCGTTTGAACAGGGAGGAGTTCGAC
AACTTTTGTCCTATACCGAATGCTTTGTCTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGTCGGTTGGGTGCCCTAGGTGCTTGAAGAGGGAGGAGACCGTGTTCCACGCTATTTGGGAATGGGAGGAGGAAGGAGGTTGGAATTGGGTTGCTGAATACTT
ATGTCAGTTCAAGAAGTTTCAGGGAAGGAAGCTAATGTTGGTAGGGGGCCGAAAATCTGCTGATCAATGGTTGGCTCCGGTTTCCTCCTTGTACAAGCTGAATACATATG
CGGGGACAAACAGAAAGACCCAAACAAGTAGTATAGGTGCTATAGTGAGTGATAAGAAAGGGGAGGTAATGCTTACCGTGCTGAAATTGATTCCGTTTGTCCAAGATGTT
GATACGTTGGAAGCAATGGCAATCCGTGATTCGATGATGGTTGCGAAGGAAGCAGGGTTGCTATCGTTGAAGGTGGAGACCGACTCAGCCCGAGTTGTATTGCTGCTCAG
ATCAGATTTGGTGGACGAATCGGAAGTGGGAGTGTTGGTGAAGGAGATCGGGCGTTTGGCAAGAGATCTGCTCGATTGTTCGTTAAGCTGGTGCCGGAGGAGTGCAAATT
CAGCGACGCACGCGGCGACGAGATGGGCGATTGAAGCGAATGTTGAAGGTGTGTGGCTTGGGGAGTTGTCGTTAGGGCTTCGGTCTCGTTTGAACAGGGAGGAGTTCGAC
AACTTTTGTCCTATACCGAATGCTTTGTCTGTGTAA
Protein sequenceShow/hide protein sequence
MDVSVGCPRCLKREETVFHAIWEWEEEGGWNWVAEYLCQFKKFQGRKLMLVGGRKSADQWLAPVSSLYKLNTYAGTNRKTQTSSIGAIVSDKKGEVMLTVLKLIPFVQDV
DTLEAMAIRDSMMVAKEAGLLSLKVETDSARVVLLLRSDLVDESEVGVLVKEIGRLARDLLDCSLSWCRRSANSATHAATRWAIEANVEGVWLGELSLGLRSRLNREEFD
NFCPIPNALSV