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Lag0038993 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038993
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr2:32813458..32815240
RNA-Seq ExpressionLag0038993
SyntenyLag0038993
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158568.1 uncharacterized protein LOC111025021 [Momordica charantia]8.8e-2470.51Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        MS++ +QLLASDKLNGDNYG WKSNLNTILVI+DLRFVLTEECPP P  + NR V +AY++W +ANEKARV  L ++S
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

XP_038877369.1 uncharacterized protein LOC120069658 [Benincasa hispida]2.0e-2371.79Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        M+S LVQLLASDKL GDNY TWKSNLNTILVI+DLRFVL E+ PP P S+ NR VWE+Y++WT+ANEKA V  L N+S
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]1.1e-2366.67Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        MS+++VQ LAS+KLN DNYGTWKSNLNTILVI+DL+FVLTEECPP P  + NR +W+A+++WT+ANEKA+V  L ++S
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

XP_038895830.1 uncharacterized protein LOC120083997 [Benincasa hispida]5.1e-2450.81Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMSIGPTDDSIKVLRSYIQKIPI--
        MS++++QLLAS+K  GDNYGTWKSN+NTILVI+DLRFVLTEECPP+PG + NR V +AY++W +ANEKARV  L ++S         VL    +++ I  
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMSIGPTDDSIKVLRSYIQKIPI--

Query:  PLSDSLCDFFAKKLDPTISLTVTF
         + DSL   F K     +  T+ F
Subjt:  PLSDSLCDFFAKKLDPTISLTVTF

XP_038904195.1 uncharacterized protein LOC120090541 [Benincasa hispida]5.1e-2468.83Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNM
        MS++++QLLAS+KLNGDNYGTWKSN+NTILVI+DLRFVLTEECPP+PG   NR V++AY+ W +ANEKA+V  L ++
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNM

TrEMBL top hitse value%identityAlignment
A0A5A7T0E9 Gag/pol protein3.6e-2369.23Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        M+S++VQLLAS KLNGDNY TWKSNLNTILV++DLRF+LTEECP  P S+ NR   EAY++W +ANEKARV  L +MS
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

A0A5A7UVD5 Gag/pol protein2.1e-2369.23Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        M+S++VQLLAS+KLN DNY  WKSNLNTILV+ DLRFVLTEECP  P S+ NR  WEAY++W +ANEKARV  L +MS
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

A0A5D3CWI5 Gag/pol protein1.6e-2369.23Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        M+S +VQLLA +KLNGDNY  WKSNLNTILV++DLRFVLTEECP  P S+ NR  WEAY++W +ANEKARV  L +MS
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

A0A6J1DWG6 uncharacterized protein LOC1110250214.2e-2470.51Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        MS++ +QLLASDKLNGDNYG WKSNLNTILVI+DLRFVLTEECPP P  + NR V +AY++W +ANEKARV  L ++S
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

A0A6J1DXP1 uncharacterized protein LOC1110254681.6e-2369.23Show/hide
Query:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS
        MS++++QLLASDKLNGDNYG WKSNLNTILVI+DLR VLTEECPP P  + NR V EAY++W +AN+KARV  L ++S
Subjt:  MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCGCACTAGTACAATTACTCGCTTCGGATAAGCTTAACGGGGATAACTATGGAACTTGGAAGTCTAATCTAAACACAATACTAGTAATCGAGGATCTT
AGATTTGTCCTTACCGAAGAGTGTCCACCTAACCCTGGCTCGTCAACAAACCGAATTGTTTGGGAAGCATATGAGAAATGGACTCGCGCAAATGAAAAGGCTAGG
GTGCTTCAGTTAGGGAACATGAGTATAGGTCCCACCGATGACTCAATTAAGGTGTTGAGAAGTTATATCCAGAAAATCCCAATTCCTCTCTCAGACTCTCTCTGC
GATTTTTTCGCTAAGAAACTAGATCCCACAATCTCCCTCACGGTTACCTTTCAGAGTCCATTGGTGAATCCTCGTGGTGGTGTTCGTGTGGGATTCGTAGCAAAG
AACAAGAGCTTGCTTGCTGCTGCATTCCTACACGACGTCGCAACTCGCCTGTCGCCACCCAACACCTCACCGTTGAGGCAGGGCAGCGGGGGCGACAATGTGAGA
GACAATACAAAGGCAACACGTTCGAGGGACTCTCGAGCATATCATGCTGCTAAATTCACTGCATTCGAGAGAGCGAGCAACCGACGACGTGGGCCGCAACAAGCC
TTGGAAAGGCCAAAACGAAACACGACGTGGGCTTTCGAGTTTGTCGTCCACCCGACGAAGGGTGTCGACAGAAAGGGACGAACGAGACACGACGCTTCCTTCGCG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGCGCACTAGTACAATTACTCGCTTCGGATAAGCTTAACGGGGATAACTATGGAACTTGGAAGTCTAATCTAAACACAATACTAGTAATCGAGGATCTT
AGATTTGTCCTTACCGAAGAGTGTCCACCTAACCCTGGCTCGTCAACAAACCGAATTGTTTGGGAAGCATATGAGAAATGGACTCGCGCAAATGAAAAGGCTAGG
GTGCTTCAGTTAGGGAACATGAGTATAGGTCCCACCGATGACTCAATTAAGGTGTTGAGAAGTTATATCCAGAAAATCCCAATTCCTCTCTCAGACTCTCTCTGC
GATTTTTTCGCTAAGAAACTAGATCCCACAATCTCCCTCACGGTTACCTTTCAGAGTCCATTGGTGAATCCTCGTGGTGGTGTTCGTGTGGGATTCGTAGCAAAG
AACAAGAGCTTGCTTGCTGCTGCATTCCTACACGACGTCGCAACTCGCCTGTCGCCACCCAACACCTCACCGTTGAGGCAGGGCAGCGGGGGCGACAATGTGAGA
GACAATACAAAGGCAACACGTTCGAGGGACTCTCGAGCATATCATGCTGCTAAATTCACTGCATTCGAGAGAGCGAGCAACCGACGACGTGGGCCGCAACAAGCC
TTGGAAAGGCCAAAACGAAACACGACGTGGGCTTTCGAGTTTGTCGTCCACCCGACGAAGGGTGTCGACAGAAAGGGACGAACGAGACACGACGCTTCCTTCGCG
TGA
Protein sequenceShow/hide protein sequence
MSSALVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVWEAYEKWTRANEKARVLQLGNMSIGPTDDSIKVLRSYIQKIPIPLSDSLC
DFFAKKLDPTISLTVTFQSPLVNPRGGVRVGFVAKNKSLLAAAFLHDVATRLSPPNTSPLRQGSGGDNVRDNTKATRSRDSRAYHAAKFTAFERASNRRRGPQQA
LERPKRNTTWAFEFVVHPTKGVDRKGRTRHDASFA