; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039006 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039006
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:33486242..33489097
RNA-Seq ExpressionLag0039006
SyntenyLag0039006
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017227899.1 PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus]1.1e-4576.86Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP+S++RKLGIGE RPTTVTLQLADRS+ +PEGKIEDVLVKVDKFIFP DFI+ DYEAD++VPIILGRPFLATGR LIDVQ GELTMRV +E+V FNVFK
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTL
        AMKY D++EDCS I I +  +
Subjt:  AMKYPDEMEDCSFIRILESTL

XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]8.3e-4678.99Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP+SI+RKLGIGEARPTTVTLQLADRS  +PEGKIEDVLV+VDKFIFP DFI+ DYEADK+VPIILGRPFLATGR LIDVQKGELTMRV +++V FNVFK
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILES
        AM++ DE+E+CS + IL+S
Subjt:  AMKYPDEMEDCSFIRILES

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]6.4e-4667.86Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP+SI++KLGIGEARPTTVTLQLADRS+ +PEGKIEDVLV+VDKFIFP DFII DYEAD+DVPIILGRPFLATGR LIDVQ GELTMRV +++V FNVF 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTLLRQQYRIRLVTFGRAWEGE
        AM++PDE+E+CS I +++S +  + ++        AW+ E
Subjt:  AMKYPDEMEDCSFIRILESTLLRQQYRIRLVTFGRAWEGE

XP_030478287.1 uncharacterized protein LOC115695357 [Cannabis sativa]1.9e-4572.44Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP+SI++KLGIGEARPTTVTLQLADRS+ +PEGKIEDVLV+VDKFIFP DFII DYEAD+DVPIILGRPFLATGR LIDVQ GELTMRV +++V FNVF 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTLLRQQYR
        AM++PDE+E+CS I +++S +  + ++
Subjt:  AMKYPDEMEDCSFIRILESTLLRQQYR

XP_030504924.1 uncharacterized protein LOC115719886 [Cannabis sativa]8.3e-4667.86Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP+SI++KLGIGEARPTTVTLQLADRS+ +PEGKIEDVLV+VDKFIFP DFII DYEAD+DVPIILGRPFLATGR LIDVQ GELTMRV +++V FNVF 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTLLRQQYRIRLVTFGRAWEGE
        AM++PDE+E+CS I +++S +  + ++        AW  E
Subjt:  AMKYPDEMEDCSFIRILESTLLRQQYRIRLVTFGRAWEGE

TrEMBL top hitse value%identityAlignment
A0A2G9H0P5 Uncharacterized protein1.3e-4168.07Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MP SIYR LG+GEA+PT++TLQLADRS+TYP+G IED+LVKVDKFIFP DFI+ D E D ++PIILGRPFLATG+ LIDVQKGELTMRV ++++ FNVFK
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILES
        AMK+P+E ++C F+ + ++
Subjt:  AMKYPDEMEDCSFIRILES

A0A6J1CS22 uncharacterized protein LOC1110138052.3e-4170.97Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MPLSIY KLGI EARPTTVTLQLADRSIT+PEGKIEDV V+V+KF FP DFII DY+A K+VPIILGRPFLATGRAL+DV KGELTM V ++EVKF+V  
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTLLRQ
        +MK+  E E+CS ++IL+  L+ +
Subjt:  AMKYPDEMEDCSFIRILESTLLRQ

A0A6J1D6R2 uncharacterized protein LOC1110181404.6e-4272.13Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MPLSIY KLGIGEARPTT+TLQLADRSITY E KIEDVLV+VDKFIFP DFII DY+ DK+VPII+GRPFL+TGRAL+DVQKGEL + V + EVKF+V+ 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTLL
        +MK P E E+CS ++IL   L+
Subjt:  AMKYPDEMEDCSFIRILESTLL

A0A6J1DMD0 uncharacterized protein LOC1110223481.9e-4380.18Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MPLSIYRKLG+GEARPTTVTLQLADRSITYPEGKIEDVLV+VDKFIFP DFII DY+ADK+VPIILGRPFL TGRAL+DVQKGELTMRV ++E KF+++ 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDC
        +MK+P   E+C
Subjt:  AMKYPDEMEDC

A0A6J1DV77 uncharacterized protein LOC1110238182.7e-4271.07Show/hide
Query:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK
        MPLS+Y+KLGIGEARP TVTLQLADRSITY EGKIEDVLV+VDKFIFP DFII DYEADK++PIILGRPFL+TGRALIDV  GELT+RV +++V  ++F 
Subjt:  MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFK

Query:  AMKYPDEMEDCSFIRILESTL
        ++KYP ++E+CS++RI +  +
Subjt:  AMKYPDEMEDCSFIRILESTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTTTCGATCTATCGGAAGCTTGGTATTGGTGAAGCTAGGCCTACCACAGTTACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGA
TGTCTTAGTAAAAGTGGATAAATTCATATTTCCTGTTGATTTTATTATTTTCGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTG
GTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGAAGTAAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGAT
TGCTCCTTCATCAGGATTCTGGAGAGCACATTATTGAGACAGCAATACAGGATTCGACTAGTAACATTCGGAAGAGCATGGGAGGGTGAGACGTTGCCCATTATTGTTGC
ATCAGATTTCACTATAGTCCATATTAAGGCAGTGAAAACACCTTGGTATGATGACTTTTTCGATTACCTTGATCTTGGAAATTTTCCTCCTGGTTTATCAAAAGAACAAA
TGAAAGAATTTTTCCATGGGGTGAAGTTTTATTTATCGAATGATGCATCTATGGTTAAACAATGTGTTGAAAACGATGGGAGAGTGTTCAAAGTGAATGGTAAATTGCAG
GGATGCTGCCACGTATTGCATAAAGTCCTATTTATTCACAACCCTTCGGTAAGTGCTTCTCACTCCAATTTCTTGCTTACAATCTTTGTCGTTTGCATTCTTCTTTCTTT
GTTGCTATTTTCTGCACACCTCCTTGAATCTTCAATGCCTAAGACAAGAGCAAGAAAAGAAAGAGATAATGAGGAAGAGGAGGTACCTGTTGCCCCTGAAGTACCACGGA
CAAAGGCGAAGAAGAAGAAGACGCCAGAAGAAAAAGAAGCTAAGAGAAGACGACGTCAACAACGGATGGAGGACCAAGAAGATGTTCAAAATGGTATGGAAGTTGTTGCT
GCCACGGTAGTTGAAGAGGAGCTGAAAGAACCAGAAGAACAAAATCCAGAGCAGATTGAACAGAGAGTTGCGGATACAGAGGAAGCTCAAGAAGAGGTTCAAGGAAAAAA
ACAGAATGAAGATGTGCGAGGAGAACAGGCAGAGGTTGCGCCTGAAGGAGATAATGAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGCACCCAAACGTC
GCCGCATTAAGCGAAAAACAGGTCGCATCAAGAGAAGAAAGCTGAGGAAGCGCGGTTGCTCAAGCGAAGGGCGGAAAAGGAGCAAAAGTGTTGCTGAAGCATCAGAAGAA
CACGATGAAATAGAAGAACAACAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGTGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATT
TAGCGGTGATCTTCCGTATTTTCTAAAGACCGGTATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGAGAGCGAATTTTATG
CTAACATTAACAAAGAGGATGGTTTCCAGGTGATTGTTCGAGGAGTTGAGGTAGACTGGAGTCCTAGTGCTATTAACACACTGTTTAACCTTCAGAATTCCCCCATGCAG
CATATAATGAATGGTTATAGCGCCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTTTCGATCTATCGGAAGCTTGGTATTGGTGAAGCTAGGCCTACCACAGTTACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGA
TGTCTTAGTAAAAGTGGATAAATTCATATTTCCTGTTGATTTTATTATTTTCGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTG
GTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGAAGTAAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGAT
TGCTCCTTCATCAGGATTCTGGAGAGCACATTATTGAGACAGCAATACAGGATTCGACTAGTAACATTCGGAAGAGCATGGGAGGGTGAGACGTTGCCCATTATTGTTGC
ATCAGATTTCACTATAGTCCATATTAAGGCAGTGAAAACACCTTGGTATGATGACTTTTTCGATTACCTTGATCTTGGAAATTTTCCTCCTGGTTTATCAAAAGAACAAA
TGAAAGAATTTTTCCATGGGGTGAAGTTTTATTTATCGAATGATGCATCTATGGTTAAACAATGTGTTGAAAACGATGGGAGAGTGTTCAAAGTGAATGGTAAATTGCAG
GGATGCTGCCACGTATTGCATAAAGTCCTATTTATTCACAACCCTTCGGTAAGTGCTTCTCACTCCAATTTCTTGCTTACAATCTTTGTCGTTTGCATTCTTCTTTCTTT
GTTGCTATTTTCTGCACACCTCCTTGAATCTTCAATGCCTAAGACAAGAGCAAGAAAAGAAAGAGATAATGAGGAAGAGGAGGTACCTGTTGCCCCTGAAGTACCACGGA
CAAAGGCGAAGAAGAAGAAGACGCCAGAAGAAAAAGAAGCTAAGAGAAGACGACGTCAACAACGGATGGAGGACCAAGAAGATGTTCAAAATGGTATGGAAGTTGTTGCT
GCCACGGTAGTTGAAGAGGAGCTGAAAGAACCAGAAGAACAAAATCCAGAGCAGATTGAACAGAGAGTTGCGGATACAGAGGAAGCTCAAGAAGAGGTTCAAGGAAAAAA
ACAGAATGAAGATGTGCGAGGAGAACAGGCAGAGGTTGCGCCTGAAGGAGATAATGAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGCACCCAAACGTC
GCCGCATTAAGCGAAAAACAGGTCGCATCAAGAGAAGAAAGCTGAGGAAGCGCGGTTGCTCAAGCGAAGGGCGGAAAAGGAGCAAAAGTGTTGCTGAAGCATCAGAAGAA
CACGATGAAATAGAAGAACAACAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGTGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATT
TAGCGGTGATCTTCCGTATTTTCTAAAGACCGGTATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGAGAGCGAATTTTATG
CTAACATTAACAAAGAGGATGGTTTCCAGGTGATTGTTCGAGGAGTTGAGGTAGACTGGAGTCCTAGTGCTATTAACACACTGTTTAACCTTCAGAATTCCCCCATGCAG
CATATAATGAATGGTTATAGCGCCATCTAG
Protein sequenceShow/hide protein sequence
MPLSIYRKLGIGEARPTTVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIIFDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMED
CSFIRILESTLLRQQYRIRLVTFGRAWEGETLPIIVASDFTIVHIKAVKTPWYDDFFDYLDLGNFPPGLSKEQMKEFFHGVKFYLSNDASMVKQCVENDGRVFKVNGKLQ
GCCHVLHKVLFIHNPSVSASHSNFLLTIFVVCILLSLLLFSAHLLESSMPKTRARKERDNEEEEVPVAPEVPRTKAKKKKTPEEKEAKRRRRQQRMEDQEDVQNGMEVVA
ATVVEEELKEPEEQNPEQIEQRVADTEEAQEEVQGKKQNEDVRGEQAEVAPEGDNEPVQEARVEVIMPEAPKRRRIKRKTGRIKRRKLRKRGCSSEGRKRSKSVAEASEE
HDEIEEQQLPFDRFVNNFARAKYAVLLKRDFLFERGFSGDLPYFLKTGIADHGWELFCAKPESVNAQVESEFYANINKEDGFQVIVRGVEVDWSPSAINTLFNLQNSPMQ
HIMNGYSAI