; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039029 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039029
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:34037044..34037385
RNA-Seq ExpressionLag0039029
SyntenyLag0039029
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]6.5e-0636.59Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNSPS-VFIELDSIQVVNLLKGKEEDLS
        DASWS   ++GG+GWIL       + A    I +K  I  LE + ++ GL+ I   S S +++E DS++V+ L+K ++ DL+
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNSPS-VFIELDSIQVVNLLKGKEEDLS
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]4.6e-0433.33Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ-NSPSVFIELDSIQVVNLLKGKEEDLSKL
        +A+W A    GG+GWILR      I A  + I  +  I  LE +A+ EGL++I Q +   + +E DS++ ++LL  + +D +++
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ-NSPSVFIELDSIQVVNLLKGKEEDLSKL
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.1e-0540Show/hide
Query:  ADASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNS--PSVFIELDSIQVVNLLKGKEEDLSK
        ADASWS +   GG+GWI+RS +   + A  + +     + LLEA A++EGL+++        + IE DS +V +LL  K EDL+K
Subjt:  ADASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNS--PSVFIELDSIQVVNLLKGKEEDLSK
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.2e-0433.33Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ-NSPSVFIELDSIQVVNLLKGKEEDLSKL
        +A+W A    GG+GWILR      I A  + I  +  I  LE +A+ EGL++I Q +   + +E DS++ ++LL  + +D +++
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ-NSPSVFIELDSIQVVNLLKGKEEDLSKL
A0A6J1CQG0 uncharacterized protein LOC1110132163.1e-0636.59Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNSPS-VFIELDSIQVVNLLKGKEEDLS
        DASWS   ++GG+GWIL       + A    I +K  I  LE + ++ GL+ I   S S +++E DS++V+ L+K ++ DL+
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNSPS-VFIELDSIQVVNLLKGKEEDLS
A0A6J1D5W1 uncharacterized protein LOC1110173295.0e-0430.95Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKS-IPQNSPSVFIELDSIQVVNLLKGKEEDLSKL
        DA+W A   +GG+GWI+R+       A  QTI     I  LE +A+  G+++ +  +S S+ IE +S++ ++L++G +++++++
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKS-IPQNSPSVFIELDSIQVVNLLKGKEEDLSKL
A0A6J1DNV9 uncharacterized protein LOC1110224035.4e-0640Show/hide
Query:  ADASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNS--PSVFIELDSIQVVNLLKGKEEDLSK
        ADASWS +   GG+GWI+RS +   + A  + +     + LLEA A++EGL+++        + IE DS +V +LL  K EDL+K
Subjt:  ADASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNS--PSVFIELDSIQVVNLLKGKEEDLSK
A0A6J1DSV1 uncharacterized protein LOC1110236086.5e-0431.52Show/hide
Query:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ---------NSPSVFIELDSIQVVNLLKGKEEDLSKL
        DA+W A    GG+GWILR      I A  + I  +  I  LE +A+ EGL++I Q         +   + +E DS++ ++LL  + +D +++
Subjt:  DASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQ---------NSPSVFIELDSIQVVNLLKGKEEDLSKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAATATCCACAATAATTACAATAGAAAGCATAATTAAGAGCATAAAAGGAAAGGAATTGACCGTCGAAAAACCCCTTGCTGATGCTTCGTGGAGTGCAACGAA
CAAGATTGGGGGCGTAGGGTGGATTCTCAGAAGCTCGAATGACATGCCAATCTTTGCTAGATATCAGACGATTCACAAAAAATGGCCGATTGCTTTGCTTGAAGCTCTTG
CGGTAGTGGAAGGGCTAAAATCGATCCCCCAAAACTCCCCTTCGGTGTTTATCGAGCTTGACTCTATTCAGGTGGTAAACTTGTTGAAGGGGAAGGAGGAGGATCTATCT
AAACTATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAATATCCACAATAATTACAATAGAAAGCATAATTAAGAGCATAAAAGGAAAGGAATTGACCGTCGAAAAACCCCTTGCTGATGCTTCGTGGAGTGCAACGAA
CAAGATTGGGGGCGTAGGGTGGATTCTCAGAAGCTCGAATGACATGCCAATCTTTGCTAGATATCAGACGATTCACAAAAAATGGCCGATTGCTTTGCTTGAAGCTCTTG
CGGTAGTGGAAGGGCTAAAATCGATCCCCCAAAACTCCCCTTCGGTGTTTATCGAGCTTGACTCTATTCAGGTGGTAAACTTGTTGAAGGGGAAGGAGGAGGATCTATCT
AAACTATCATAG
Protein sequenceShow/hide protein sequence
MAKISTIITIESIIKSIKGKELTVEKPLADASWSATNKIGGVGWILRSSNDMPIFARYQTIHKKWPIALLEALAVVEGLKSIPQNSPSVFIELDSIQVVNLLKGKEEDLS
KLS