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Lag0039058 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039058
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol protein
Genome locationchr2:34911389..34914063
RNA-Seq ExpressionLag0039058
SyntenyLag0039058
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035816.1 pol protein [Cucumis melo var. makuwa]8.7e-4474.8Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        M+GVLRF R+GKLSPRF+GPFEILERIGPVAYRLALPPSLS VH+VFHVSMLR+Y+ +P+H +DYEPL++ ENLSY E+PV +L +EVK+LRNREI  VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAMMANP
        VL RNH  EEATWERED M A P
Subjt:  VLLRNHLSEEATWEREDAMMANP

KAA0053412.1 pol protein [Cucumis melo var. makuwa]3.9e-4477.31Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF R+GKLSPRF+GPFEILERIGPVAYRLALPPSLS VHNVFHVSMLR+Y+++P+H VDYEPL++ ENLSY E+P+ +L +EVK+LRNREI  VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAM
        VL RNH  EEATWERED M
Subjt:  VLLRNHLSEEATWEREDAM

KAA0060822.1 pol protein [Cucumis melo var. makuwa]8.7e-4478.51Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF +KGKLSPRF+GPFEILERIGPVAYRLALPPS S VH+VFHVSMLRRY+ANP H VD+EPLQ+ ENLSYEE+PV IL  EVK LR+REI+ VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAMMA
        VL RNH  EEATWERE+ M A
Subjt:  VLLRNHLSEEATWEREDAMMA

KAA0060839.1 pol protein [Cucumis melo var. makuwa]8.7e-4476.47Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF R+GKLSPRF+GPFEILERIGPVAYRL LPPSLSAVH++FHVSMLR+Y+++P+H VDYEPL++ ENLSY E+PV +L +EVK+LRNREI+ VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAM
        VL RNH  EEATWERED M
Subjt:  VLLRNHLSEEATWEREDAM

XP_038896625.1 uncharacterized protein LOC120084887 [Benincasa hispida]3.9e-4476.86Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF +KGKLSPRF+GPFEILERIG VAYRLALPPSLSAVHNVFHVSMLR+YL +P H VD+EPLQL +NLSYEE+PV ++ +EVKVLR++E+A VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAMMA
        VL +NH  EEATWERED M A
Subjt:  VLLRNHLSEEATWEREDAMMA

TrEMBL top hitse value%identityAlignment
A0A5A7SYV5 Pol protein5.5e-4477.31Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF R+GKLSPRF+GPFEILERIGPVAYRLALPPSLSAVH+VFHVSMLR+Y+++P+H VDYEPL++ ENLSY E+PV +L +EVK+LRNREI  VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAM
        VL RNH  EEATWE+ED M
Subjt:  VLLRNHLSEEATWEREDAM

A0A5A7T0S7 Reverse transcriptase4.2e-4474.8Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        M+GVLRF R+GKLSPRF+GPFEILERIGPVAYRLALPPSLS VH+VFHVSMLR+Y+ +P+H +DYEPL++ ENLSY E+PV +L +EVK+LRNREI  VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAMMANP
        VL RNH  EEATWERED M A P
Subjt:  VLLRNHLSEEATWEREDAMMANP

A0A5A7UCD5 Reverse transcriptase1.9e-4477.31Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF R+GKLSPRF+GPFEILERIGPVAYRLALPPSLS VHNVFHVSMLR+Y+++P+H VDYEPL++ ENLSY E+P+ +L +EVK+LRNREI  VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAM
        VL RNH  EEATWERED M
Subjt:  VLLRNHLSEEATWEREDAM

A0A5A7UY56 Pol protein4.2e-4478.51Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF +KGKLSPRF+GPFEILERIGPVAYRLALPPS S VH+VFHVSMLRRY+ANP H VD+EPLQ+ ENLSYEE+PV IL  EVK LR+REI+ VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAMMA
        VL RNH  EEATWERE+ M A
Subjt:  VLLRNHLSEEATWEREDAMMA

A0A5A7V556 Pol protein4.2e-4476.47Show/hide
Query:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK
        MKGVLRF R+GKLSPRF+GPFEILERIGPVAYRL LPPSLSAVH++FHVSMLR+Y+++P+H VDYEPL++ ENLSY E+PV +L +EVK+LRNREI+ VK
Subjt:  MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVK

Query:  VLLRNHLSEEATWEREDAM
        VL RNH  EEATWERED M
Subjt:  VLLRNHLSEEATWEREDAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGGTTTTGAGGTTTGGAAGAAAAGGCAAGCTCAGTCCACGTTTCATTGGTCCGTTTGAGATTCTAGAGCGGATTGGCCCGGTGGCTTATCGTCTAGCGTTGCC
GCCTTCCCTTTCAGCGGTTCACAACGTTTTCCATGTCTCTATGTTACGAAGGTATTTGGCAAATCCAGCCCACAGAGTGGACTATGAACCCTTGCAACTTAGAGAGAACT
TGTCTTATGAGGAGGAACCTGTGCTAATTCTTGACAAAGAGGTGAAGGTCCTTCGCAATCGCGAGATAGCTCCCGTGAAGGTCCTTTTGCGAAACCATTTGTCTGAAGAG
GCAACGTGGGAGAGAGAAGATGCAATGATGGCCAACCCCTCTCCCTCACGTTCATCTCTCTCTTTCTCTCTCGCTCCCTCTCAGCCGCCGCAAGCTGACGACGCCGCCGC
CTCCACCATCGCTCGCGCCGCACGCCGCCGCGAATCGCCGCCGCCGGTAACGTCTCTTGTCACTCTCTCTCTCGTCTCTTTCTCCCTCGATCTCTCTCTCTCTCTGTATA
GCAGATCCGACGCGCCGCCGCCTGCAACCCACTCACGAGCTGCCGTCGATCTACAAGTCGCTGTCGCCACTCAAGCGTACCCATTCAATTCCGACGATTCAAGCAGTGGG
TCTTCAAGTTTCAGCGTGTTTGAGCAATTCCGGCTTTGGGTTCTCTTAGCTTTTGTGGATTTAATCGTCGGTTTGGAGCGTTGTTGGATCATTGGACAGCAAGCGGTGTT
TCTGTTTTGGGTAGAGTTTAAGGTGTACAGTACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGGTTTTGAGGTTTGGAAGAAAAGGCAAGCTCAGTCCACGTTTCATTGGTCCGTTTGAGATTCTAGAGCGGATTGGCCCGGTGGCTTATCGTCTAGCGTTGCC
GCCTTCCCTTTCAGCGGTTCACAACGTTTTCCATGTCTCTATGTTACGAAGGTATTTGGCAAATCCAGCCCACAGAGTGGACTATGAACCCTTGCAACTTAGAGAGAACT
TGTCTTATGAGGAGGAACCTGTGCTAATTCTTGACAAAGAGGTGAAGGTCCTTCGCAATCGCGAGATAGCTCCCGTGAAGGTCCTTTTGCGAAACCATTTGTCTGAAGAG
GCAACGTGGGAGAGAGAAGATGCAATGATGGCCAACCCCTCTCCCTCACGTTCATCTCTCTCTTTCTCTCTCGCTCCCTCTCAGCCGCCGCAAGCTGACGACGCCGCCGC
CTCCACCATCGCTCGCGCCGCACGCCGCCGCGAATCGCCGCCGCCGGTAACGTCTCTTGTCACTCTCTCTCTCGTCTCTTTCTCCCTCGATCTCTCTCTCTCTCTGTATA
GCAGATCCGACGCGCCGCCGCCTGCAACCCACTCACGAGCTGCCGTCGATCTACAAGTCGCTGTCGCCACTCAAGCGTACCCATTCAATTCCGACGATTCAAGCAGTGGG
TCTTCAAGTTTCAGCGTGTTTGAGCAATTCCGGCTTTGGGTTCTCTTAGCTTTTGTGGATTTAATCGTCGGTTTGGAGCGTTGTTGGATCATTGGACAGCAAGCGGTGTT
TCTGTTTTGGGTAGAGTTTAAGGTGTACAGTACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAG
Protein sequenceShow/hide protein sequence
MKGVLRFGRKGKLSPRFIGPFEILERIGPVAYRLALPPSLSAVHNVFHVSMLRRYLANPAHRVDYEPLQLRENLSYEEEPVLILDKEVKVLRNREIAPVKVLLRNHLSEE
ATWEREDAMMANPSPSRSSLSFSLAPSQPPQADDAAASTIARAARRRESPPPVTSLVTLSLVSFSLDLSLSLYSRSDAPPPATHSRAAVDLQVAVATQAYPFNSDDSSSG
SSSFSVFEQFRLWVLLAFVDLIVGLERCWIIGQQAVFLFWVEFKVYSTRDGELLSHGSPLG