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Lag0039078 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039078
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:35377364..35380436
RNA-Seq ExpressionLag0039078
SyntenyLag0039078
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP39959.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.4e-1148.1Show/hide
Query:  VMKFDGKNFGYWKMQVKDYLICKKVHKALK-ERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        + KFDG NFG+WKMQ++DYL  KK+H+ L+ ++P+ MKD++W  LD +A+  IR+ LS +VA  +A E + V LM +L+
Subjt:  VMKFDGKNFGYWKMQVKDYLICKKVHKALK-ERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
TKR74765.1 hypothetical protein D5086_0000292320 [Populus alba]1.2e-1048.75Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M++E+W+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
TKR75000.1 hypothetical protein D5086_0000289720 [Populus alba]4.2e-1151.25Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M+ EDW+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
TKR90717.1 hypothetical protein D5086_0000230290 [Populus alba]3.2e-1150Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M++E+W+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
XP_024021224.1 uncharacterized protein LOC112091537 [Morus notabilis]9.4e-1148.1Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVHKALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG +F YWKMQ++DYL  KK+H  L E+P+ MKDE+W+ LD + +  IR+ L+ +VA  VA E +A  L+  L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVHKALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
TrEMBL top hitse value%identityAlignment
A0A151RBV2 Retrovirus-related Pol polyprotein from transposon TNT 1-944.6e-1148.1Show/hide
Query:  VMKFDGKNFGYWKMQVKDYLICKKVHKALK-ERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        + KFDG NFG+WKMQ++DYL  KK+H+ L+ ++P+ MKD++W  LD +A+  IR+ LS +VA  +A E + V LM +L+
Subjt:  VMKFDGKNFGYWKMQVKDYLICKKVHKALK-ERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
A0A2N9F2J7 Uncharacterized protein2.0e-1147.06Show/hide
Query:  EPKSFDGVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESL
        E     G+ KFDG +FGYW+MQ++DYL  KK+H   L E+PKDM+D +W  LD + +  IR+ LS  VA  V  E +  KLM +L
Subjt:  EPKSFDGVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESL
A0A4U5MYD6 CCHC-type domain-containing protein2.0e-1151.25Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M+ EDW+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
A0A4U5P397 CCHC-type domain-containing protein1.6e-1150Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M++E+W+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
A0A4V6XW18 CCHC-type domain-containing protein6.0e-1148.75Show/hide
Query:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M++E+W+ LD + +  IR+ LS  VA  V  E S  KLME+L+
Subjt:  GVMKFDGKNFGYWKMQVKDYLICKKVH-KALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein8.8e-0734.21Show/hide
Query:  KFDGKNFGYWKMQVKDYLICKKVHKALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT
        K DG ++ + +M+++DYL  KK+H+ L ++ + M  +DW  L  + +  IR+ +S ++A  VA E S   LM+ L+
Subjt:  KFDGKNFGYWKMQVKDYLICKKVHKALKERPKDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTTCCCTTAAGTGGTGACTTCAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGCCAAAGATTGCGGCAGAGTTGCACCAAGAGAAGAAAAACGGCGAGAA
AGTGGCTTTTGCGGCTGGGAACCTGCAGTTGCAGAAGACTGGACGTAGTCCCGAGCTTGGGGCGAACCAAGCTTTTGGTTCAGGAGTCATGGGTTTTGTAGAGCCAAAAA
GTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAATTTGCAAGAAAGTGCATAAGGCATTGAAGGAGAGACCG
AAAGATATGAAGGACGAAGATTGGGAAGGTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATGTGGCAAGTCTTGTAGCCCATGAGACATCTGC
AGTCAAGTTGATGGAATCGCTTACAAAGCAAGTGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTTCCCTTAAGTGGTGACTTCAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGCCAAAGATTGCGGCAGAGTTGCACCAAGAGAAGAAAAACGGCGAGAA
AGTGGCTTTTGCGGCTGGGAACCTGCAGTTGCAGAAGACTGGACGTAGTCCCGAGCTTGGGGCGAACCAAGCTTTTGGTTCAGGAGTCATGGGTTTTGTAGAGCCAAAAA
GTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAATTTGCAAGAAAGTGCATAAGGCATTGAAGGAGAGACCG
AAAGATATGAAGGACGAAGATTGGGAAGGTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATGTGGCAAGTCTTGTAGCCCATGAGACATCTGC
AGTCAAGTTGATGGAATCGCTTACAAAGCAAGTGGCATAG
Protein sequenceShow/hide protein sequence
MSVPLSGDFRLFIRGALVLKEPKIAAELHQEKKNGEKVAFAAGNLQLQKTGRSPELGANQAFGSGVMGFVEPKSFDGVMKFDGKNFGYWKMQVKDYLICKKVHKALKERP
KDMKDEDWEGLDEEAVATIRMCLSMDVASLVAHETSAVKLMESLTKQVA