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Lag0039091 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039091
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:35772741..35773223
RNA-Seq ExpressionLag0039091
SyntenyLag0039091
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21788.1 hypothetical protein TSUD_329120, partial [Trifolium subterraneum]1.3e-2341.35Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        LIL     N+  S+L    V FWVR+ +LPL  R++  A+K+GNT+G F E +  + S   G  +R  + +D+ KPL+RG  L  +  G+E WV  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE
        LP+FCF+CG IGH  ++C ++   +EV  S  E
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE

MCH80348.1 hypothetical protein [Trifolium medium]3.7e-2340.6Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        LIL     N+  S+L    V FWVR+ +LPL  R++  A+K+GNT+G F E +    + + G  +R  + +D+ KPL+RG  L  +  G+E WV  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE
        LP+FCF+CG IGH  ++C ++   +EV  S  E
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE

PPS09761.1 hypothetical protein GOBAR_AA10888 [Gossypium barbadense]3.7e-2339.1Show/hide
Query:  LTEVCLILESP-KENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDF--IEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEEC
        L + CL    P  + ++++  EF    FW+R+ N+P+   +   A ++GNTIG+   I+W KDR +  W   +R  +KIDISKPL+R   L++   GE  
Subjt:  LTEVCLILESP-KENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDF--IEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEEC

Query:  WVTLRYERLPDFCFSCGIIGHAAKECNELRTGEEVNKSNFEYGFLVEIPRIYKNYQ
         V ++YERLPDFC+ CG+IGH +K C + R G  +N SN +YG  +  P +  N +
Subjt:  WVTLRYERLPDFCFSCGIIGHAAKECNELRTGEEVNKSNFEYGFLVEIPRIYKNYQ

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-2736.76Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        ++L+ P  ++++S+LEF +V FW+ + +LP+ + N   A ++GN IG+F++ + +     WG S+R  + IDI+KPL+RG  +  +G    CW+ ++YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECN-ELRTGEEVNKSNFEYG
        LPDFC+ CG+IGH++ +C+      ++ +++  EYG
Subjt:  LPDFCFSCGIIGHAAKECN-ELRTGEEVNKSNFEYG

XP_024642377.1 uncharacterized protein LOC112422874 [Medicago truncatula]2.2e-2343.65Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        LIL++    +  S+L+   V FWVRI +LPL  R+D  ARK+G+ +G F+E ++ R + + G SIR  + ID+  PL+RG +LK +      W+  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEE
        LP+FC+ CG IGH  KEC E  TG++
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEE

TrEMBL top hitse value%identityAlignment
A0A2P5Y2I8 CCHC-type domain-containing protein1.8e-2339.1Show/hide
Query:  LTEVCLILESP-KENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDF--IEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEEC
        L + CL    P  + ++++  EF    FW+R+ N+P+   +   A ++GNTIG+   I+W KDR +  W   +R  +KIDISKPL+R   L++   GE  
Subjt:  LTEVCLILESP-KENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDF--IEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEEC

Query:  WVTLRYERLPDFCFSCGIIGHAAKECNELRTGEEVNKSNFEYGFLVEIPRIYKNYQ
         V ++YERLPDFC+ CG+IGH +K C + R G  +N SN +YG  +  P +  N +
Subjt:  WVTLRYERLPDFCFSCGIIGHAAKECNELRTGEEVNKSNFEYGFLVEIPRIYKNYQ

A0A2Z6LV25 Uncharacterized protein (Fragment)6.2e-2441.35Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        LIL     N+  S+L    V FWVR+ +LPL  R++  A+K+GNT+G F E +  + S   G  +R  + +D+ KPL+RG  L  +  G+E WV  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE
        LP+FCF+CG IGH  ++C ++   +EV  S  E
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE

A0A392M033 CCHC-type domain-containing protein (Fragment)1.8e-2340.6Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        LIL     N+  S+L    V FWVR+ +LPL  R++  A+K+GNT+G F E +    + + G  +R  + +D+ KPL+RG  L  +  G+E WV  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE
        LP+FCF+CG IGH  ++C ++   +EV  S  E
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFE

A0A392MB81 Zinc CCHC-type-like protein (Fragment)2.3e-2342.86Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        +IL     N+  S+LE  KV FWVRI +LPL  R++  A+K+GN +G F E +    + + G  +R    +D+ KPL+RG  LK +  G++ WV  +YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECNELRTGEE
        LP+FCF CG IGH  K+C E+   +E
Subjt:  LPDFCFSCGIIGHAAKECNELRTGEE

A0A6J1DU55 uncharacterized protein LOC1110231355.4e-2836.76Show/hide
Query:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
        ++L+ P  ++++S+LEF +V FW+ + +LP+ + N   A ++GN IG+F++ + +     WG S+R  + IDI+KPL+RG  +  +G    CW+ ++YER
Subjt:  LILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER

Query:  LPDFCFSCGIIGHAAKECN-ELRTGEEVNKSNFEYG
        LPDFC+ CG+IGH++ +C+      ++ +++  EYG
Subjt:  LPDFCFSCGIIGHAAKECN-ELRTGEEVNKSNFEYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding3.0e-0729.25Show/hide
Query:  SDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYERLPDFCFSCGIIG
        SD EFK++ FW++I  +PL +        IG  +G F+E    R               D+S       +LK            +YE+L +FC +CG++ 
Subjt:  SDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYERLPDFCFSCGIIG

Query:  HAAKEC
        H A EC
Subjt:  HAAKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTGGCTCTTTGACAGAAGTTTGTCTAATTCTAGAAAGTCCAAAAGAAAATCAAAGTGTGTCTGATTTGGAGTTCAAGAAGGTTGATTTTTGGGTCAGAATAAT
CAATTTGCCGCTGGGATATAGGAATGATTGTGCAGCTAGGAAGATTGGAAACACAATTGGTGATTTCATTGAATGGGAAAAGGATAGATACAGTACAGTATGGGGAAATA
GTATCAGAGCGCATATCAAAATAGACATATCCAAACCTCTTCAAAGAGGTTTCATGCTTAAAACAGAAGGGGTAGGGGAAGAATGTTGGGTAACCCTAAGATATGAAAGG
TTGCCTGATTTCTGCTTCAGTTGTGGTATTATTGGTCATGCGGCGAAGGAATGTAATGAGTTAAGAACAGGTGAAGAGGTAAACAAAAGCAATTTCGAATATGGGTTCTT
GGTTGAAATTCCAAGGATTTACAAAAATTACCAGAATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTGGCTCTTTGACAGAAGTTTGTCTAATTCTAGAAAGTCCAAAAGAAAATCAAAGTGTGTCTGATTTGGAGTTCAAGAAGGTTGATTTTTGGGTCAGAATAAT
CAATTTGCCGCTGGGATATAGGAATGATTGTGCAGCTAGGAAGATTGGAAACACAATTGGTGATTTCATTGAATGGGAAAAGGATAGATACAGTACAGTATGGGGAAATA
GTATCAGAGCGCATATCAAAATAGACATATCCAAACCTCTTCAAAGAGGTTTCATGCTTAAAACAGAAGGGGTAGGGGAAGAATGTTGGGTAACCCTAAGATATGAAAGG
TTGCCTGATTTCTGCTTCAGTTGTGGTATTATTGGTCATGCGGCGAAGGAATGTAATGAGTTAAGAACAGGTGAAGAGGTAAACAAAAGCAATTTCGAATATGGGTTCTT
GGTTGAAATTCCAAGGATTTACAAAAATTACCAGAATTTTTGA
Protein sequenceShow/hide protein sequence
MDLGSLTEVCLILESPKENQSVSDLEFKKVDFWVRIINLPLGYRNDCAARKIGNTIGDFIEWEKDRYSTVWGNSIRAHIKIDISKPLQRGFMLKTEGVGEECWVTLRYER
LPDFCFSCGIIGHAAKECNELRTGEEVNKSNFEYGFLVEIPRIYKNYQNF