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Lag0039097 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039097
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:35854409..35855368
RNA-Seq ExpressionLag0039097
SyntenyLag0039097
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93403.1 hypothetical protein AMTR_s04947p00001170 [Amborella trichopoda]1.9e-1653.85Show/hide
Query:  NEQVQVATLRSELESGKGDGGSNNDVG-ASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILT
        N ++Q+  L +EL+ G+ +    + V  A G   D +          PPLPFPQR   + QDGQF+KFL++LKQLHINIPLVEA+EQMPNY KFLKDILT
Subjt:  NEQVQVATLRSELESGKGDGGSNNDVG-ASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILT

Query:  KKKR
        KK+R
Subjt:  KKKR

MCH87321.1 hypothetical protein [Trifolium medium]2.5e-1659.46Show/hide
Query:  DVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS
        D+E PYVPPPP+ PP+P+PQR       GQF+KF+E+LK+LHI+IP +EAI Q+P+YAKFLKDIL+ K++ E++
Subjt:  DVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS

XP_030504828.1 uncharacterized protein LOC115719782 [Cannabis sativa]1.1e-1680.7Show/hide
Query:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR
        PPLPFPQR   + QDGQFK+FL++LKQLHINIPLVEA+EQMPNY KFLKDILTKK+R
Subjt:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR

XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa]6.6e-1782.46Show/hide
Query:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR
        PPLPFPQR   + QDGQFKKFL++LKQLHINIPLVEA+EQMPNY KFLKDILTKK+R
Subjt:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]6.6e-1782.46Show/hide
Query:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR
        PPLPFPQR   + QDGQFKKFL++LKQLHINIPLVEA+EQMPNY KFLKDILTKK+R
Subjt:  PPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR

TrEMBL top hitse value%identityAlignment
A0A2K3K4E3 Uncharacterized protein (Fragment)1.7e-1564.71Show/hide
Query:  EPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR
        E PYVPPPP+ PP+P+PQR +     GQFKKF+E+L++L+I IP +EAI QMP+YAKFLKDILT KK+
Subjt:  EPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKR

A0A2K3K4I9 Uncharacterized protein (Fragment)1.0e-1556.58Show/hide
Query:  EPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENSNVNE
        E PYVPPPP+ PP+P+PQR +     GQF+KF+E+LK+LHI+IP +EAI Q+P+YAKFLK+IL+ K++ E++ + E
Subjt:  EPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENSNVNE

A0A2K3M4E9 Uncharacterized protein (Fragment)3.0e-1548.96Show/hide
Query:  ELESGKGDGGSNNDVGASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS
        E+  G+ +    +   +    ++ + PYVPPPP+ PP+P+PQR        QFKKF+E+LKQL+I IP  EAI QMP+YAKFLK+ILT KKR E++
Subjt:  ELESGKGDGGSNNDVGASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS

A0A392MIZ8 Retrotrans_gag domain-containing protein (Fragment)1.2e-1659.46Show/hide
Query:  DVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS
        D+E PYVPPPP+ PP+P+PQR       GQF+KF+E+LK+LHI+IP +EAI Q+P+YAKFLKDIL+ K++ E++
Subjt:  DVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS

U5CTY8 Uncharacterized protein9.2e-1753.85Show/hide
Query:  NEQVQVATLRSELESGKGDGGSNNDVG-ASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILT
        N ++Q+  L +EL+ G+ +    + V  A G   D +          PPLPFPQR   + QDGQF+KFL++LKQLHINIPLVEA+EQMPNY KFLKDILT
Subjt:  NEQVQVATLRSELESGKGDGGSNNDVG-ASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILT

Query:  KKKR
        KK+R
Subjt:  KKKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTAATGAGCAGGTACAAGTAGCGACTCTAAGGAGTGAGTTGGAGTCTGGTAAAGGTGATGGAGGCAGCAACAATGATGTTGGAGCATCTGGTTTTGTTCTAGA
TGTGGAACCACCTTATGTGCCGCCCCCACCTCATGTACCACCTCTACCTTTTCCACAAAGGCAAATGCCTAAGAATCAGGATGGTCAATTTAAGAAGTTTTTGGAGATTC
TTAAGCAATTGCATATAAATATTCCTTTAGTAGAAGCCATTGAACAAATGCCTAATTATGCTAAGTTTCTTAAGGATATTTTGACTAAAAAAAAGAGATCCGAAAATAGC
AACGTGAACGAACGCGAGGACGAGCGGCGGTGGCGTGAAGGAAAGTGCGCAGATCCAGCAGCGATCAAAGTTGAGTATGCACGCGAGGGAGAGAGAGGAAGGGAGAGAGA
GATAGGAAGAGTAAGAAAAACAAAACATGGGAAAGGAGAAGAAGGGAGGAAGATGAAAAAAAAGATTAAAAAAAACTTCGGCAACGGTGGCAGCGACCGACGACTGGAGG
TGGTGGTGGCTGCCAAGTTTGTTAAGTTAGGGTTTATGAGTGGTGGAGAAGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTAATGAGCAGGTACAAGTAGCGACTCTAAGGAGTGAGTTGGAGTCTGGTAAAGGTGATGGAGGCAGCAACAATGATGTTGGAGCATCTGGTTTTGTTCTAGA
TGTGGAACCACCTTATGTGCCGCCCCCACCTCATGTACCACCTCTACCTTTTCCACAAAGGCAAATGCCTAAGAATCAGGATGGTCAATTTAAGAAGTTTTTGGAGATTC
TTAAGCAATTGCATATAAATATTCCTTTAGTAGAAGCCATTGAACAAATGCCTAATTATGCTAAGTTTCTTAAGGATATTTTGACTAAAAAAAAGAGATCCGAAAATAGC
AACGTGAACGAACGCGAGGACGAGCGGCGGTGGCGTGAAGGAAAGTGCGCAGATCCAGCAGCGATCAAAGTTGAGTATGCACGCGAGGGAGAGAGAGGAAGGGAGAGAGA
GATAGGAAGAGTAAGAAAAACAAAACATGGGAAAGGAGAAGAAGGGAGGAAGATGAAAAAAAAGATTAAAAAAAACTTCGGCAACGGTGGCAGCGACCGACGACTGGAGG
TGGTGGTGGCTGCCAAGTTTGTTAAGTTAGGGTTTATGAGTGGTGGAGAAGAAGATTAA
Protein sequenceShow/hide protein sequence
MEGNEQVQVATLRSELESGKGDGGSNNDVGASGFVLDVEPPYVPPPPHVPPLPFPQRQMPKNQDGQFKKFLEILKQLHINIPLVEAIEQMPNYAKFLKDILTKKKRSENS
NVNEREDERRWREGKCADPAAIKVEYAREGERGREREIGRVRKTKHGKGEEGRKMKKKIKKNFGNGGSDRRLEVVVAAKFVKLGFMSGGEED