; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039121 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039121
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr2:36376697..36382730
RNA-Seq ExpressionLag0039121
SyntenyLag0039121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030932814.1 uncharacterized protein LOC115958537 [Quercus lobata]1.8e-2038.82Show/hide
Query:  SKSSPWPK--AEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY
        S+ +P PK     D++ R +R       R   YTPL A  +QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH T EC  L+ +IE LIR+G 
Subjt:  SKSSPWPK--AEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY

Query:  PKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST
         + FVG D     L     +     L EI  I+GG+S       G+   S++ Y  A+ N+    ++  T
Subjt:  PKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST

XP_030936353.1 uncharacterized protein LOC115961515 [Quercus lobata]4.0e-2037.42Show/hide
Query:  KAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDK
        K + D +           AR   YTPL A  +QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH T EC  L+ +I+ LIR+G  + FVG D 
Subjt:  KAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDK

Query:  SKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSTLG
            L     +     L EI+ I+GG+S       G+   S++ Y   + N+    ++  T G
Subjt:  SKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSTLG

XP_030950020.1 uncharacterized protein LOC115973918 [Quercus lobata]1.8e-2040.13Show/hide
Query:  KAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDK
        K   D+R            R  +YTPL A  EQVL  I+D   LK PEKL+ DP++RN+NKYC FH DHGH T EC  L+ +IE LIR+G  +GF+G D+
Subjt:  KAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDK

Query:  SKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
                        L EI+ I+GGSS       G    S++ Y   + N+
Subjt:  SKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030955724.1 uncharacterized protein LOC115977839 [Quercus lobata]2.4e-2038.82Show/hide
Query:  SKSSPWPK--AEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY
        S+ +P PK     D++ R  R       R   YTPL A   QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH T EC  L+ +IE LIR+G 
Subjt:  SKSSPWPK--AEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY

Query:  PKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST
         K FVG D++   L     +     L EI+ I+GG+        G+   S++ Y  A+ N+    +   T
Subjt:  PKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST

XP_030970011.1 uncharacterized protein LOC115990308 [Quercus lobata]8.1e-2136.93Show/hide
Query:  KSSPWPKAEADQRPRSHRAVRNQE---------ARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEA
        ++ P   +E   RP+  RA   +E          R   YTPL A  +QVL  I+D   LK PEK++ DP++RNK+KYC FH DHGH T EC  L+ +IE 
Subjt:  KSSPWPKAEADQRPRSHRAVRNQE---------ARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEA

Query:  LIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST
        LIR+G  + FVG D     L     +    LL EI+ I+GG+S       G+   S++ Y   + N+    ++  T
Subjt:  LIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATST

TrEMBL top hitse value%identityAlignment
A0A2N9G875 Ribonuclease H7.4e-2038.46Show/hide
Query:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI
        D RL +S +KSS   +PK E      S+R    +E R   +TPL  S +QVL  IQD   ++ P KLRSDP++R+KN YC FH DHGH T +C  L+ +I
Subjt:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI

Query:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK
        EALIR+G    FV  DK       RP   D+ K        +++ EI+TI+GG +  G +    +  +R+ + + +    RK
Subjt:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK

A0A2N9GQ81 Integrase catalytic domain-containing protein7.4e-2038.46Show/hide
Query:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI
        D RL +S +KSS   +PK E      S+R    +E R   +TPL  S +QVL  IQD   ++ P KLRSDP++R+KN YC FH DHGH T +C  L+ +I
Subjt:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI

Query:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK
        EALIR+G    FV  DK       RP   D+ K        +++ EI+TI+GG +  G +    +  +R+ + + +    RK
Subjt:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK

A0A2N9H9Y5 Ribonuclease H7.4e-2038.46Show/hide
Query:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI
        D RL +S +KSS   +PK E      S+R    +E R   +TPL  S +QVL  IQD   ++ P KLRSDP++R+KN YC FH DHGH T +C  L+ +I
Subjt:  DERLLNSISKSS--PWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI

Query:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK
        EALIR+G    FV  DK       RP   D+ K        +++ EI+TI+GG +  G +    +  +R+ + + +    RK
Subjt:  EALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK

A0A2N9IUL6 Uncharacterized protein9.6e-2037.1Show/hide
Query:  KDSASYDERLLNSISKSSPWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQL
        KD       L+N  SK   +PK E      S+R    +E R   +TPL  S +QVL  IQD   ++ P KLRSDP++R+KN YC FH DHGH T +C  L
Subjt:  KDSASYDERLLNSISKSSPWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQL

Query:  RDEIEALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK
        +++IEALIR+G    FV  DK       RP   D+ K        +++ EI+TI+GG +  G +    +  +R+ + + +    RK
Subjt:  RDEIEALIRKGYPKGFVGNDK-----SKRPLPADQGKG-----GANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK

A0A6J1DZ52 uncharacterized protein LOC1110256129.6e-2046.85Show/hide
Query:  RFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFE
        +F++YTP T   EQVL  I+D  LLK PE +++ P++R+K +YC+FH DHGHAT +C  L++E+E LIRKGY K +V +D    P   +  K       E
Subjt:  RFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFE

Query:  IQTILGGSSEE
        I+TI+GGS+E+
Subjt:  IQTILGGSSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGCTTCGTGCGGCGGTGATAGTCACCTTCTTGTCGTTTGGCTTGGGCCTCGATTTCAGAAGAAAAACGCAGGCGTTTGGCTTGGGTCTCGGTATCACCACCGT
TTCTCCATTGACTGATCTTCAATACAATTTCCACTTGCCAAAAATTCAAGCAAATGGCTTTGAATTCGAACTGCCCCTTGTCCCTGCCATCTCCTGTTCGTCGCAACCAC
AACCTCCCACTTCAACTTTTTCAACAATTTCTGCACTCTTCTGCAATTTAGCGTCACAAATCTCTCCCATTGACTTGCTTGGTATCAGACGGAATTGCATTCAGATTGTG
CAGTTCATTGGCAATCCTCTCCCATTCTTCTTCTTCCTTGGTACCCGATCGGCAGCTTCCTCGTGCCCCATCTCCGGCGACGTTCACCAGCGGTCTTCCAGCGAGCGTGA
CTCCTCCGACGAGCTCCACGGCGACGCAACATCGATAGGCAGCAGCGTTTCACGTTGGTCGCGGCTGTGGCGTGTTCCTTCGGCGTTTGTGGCAGTCGTAGGCGGTGATT
CCGGTGTAGCTGCAGCGATCTCACCTGATCGCGTGGACAGCGGTGGTGGGTGGTTGTTTCCTCTGTTTTCCGGCGTTTCACGTAGTGGTTCTTGGCGTTATCGGCGAGTT
GGAGTAGTGGGTCTAAGAGTTTTAGCGGTTGCGAAGCGATTCCGTCTTTGGCTGGCCAAGGACAACCGGGAGGAGATAGGACCAGGAAAGGGATCGAGAGGGAGACCATA
CCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGCCGAGGCCGAGGCCGACCACTCGGCCCGTTTGCACGGGCCGAGTCCGTTTGCCTCCGC
TCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACC
GGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCATTGTTGATGTCACGTGAAGGGCAGGTGGATTGCTTGGCCAAATTTTGGCA
TCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGAATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTCAGAGACCAAAGGGAAGCCTCGGGTAC
GAGCAGAAAGCGCCGAGCCAGATTGGATTCGACCTCGCGGAAGAACTAGAGGTCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCTCAATCG
CAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGTTACGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAG
GCCAAGGAGCCACAGGGCTGTGCGGAACCAAGAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCCTTTGAACAGGTCTTGGCCGCAATACAGGACACAAATTTGT
TGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGG
GACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCT
ATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACA
GGAAGGCTCAAGCAACGTCGACCTTGGGAGATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAGCTTCGTGCGGCGGTGATAGTCACCTTCTTGTCGTTTGGCTTGGGCCTCGATTTCAGAAGAAAAACGCAGGCGTTTGGCTTGGGTCTCGGTATCACCACCGT
TTCTCCATTGACTGATCTTCAATACAATTTCCACTTGCCAAAAATTCAAGCAAATGGCTTTGAATTCGAACTGCCCCTTGTCCCTGCCATCTCCTGTTCGTCGCAACCAC
AACCTCCCACTTCAACTTTTTCAACAATTTCTGCACTCTTCTGCAATTTAGCGTCACAAATCTCTCCCATTGACTTGCTTGGTATCAGACGGAATTGCATTCAGATTGTG
CAGTTCATTGGCAATCCTCTCCCATTCTTCTTCTTCCTTGGTACCCGATCGGCAGCTTCCTCGTGCCCCATCTCCGGCGACGTTCACCAGCGGTCTTCCAGCGAGCGTGA
CTCCTCCGACGAGCTCCACGGCGACGCAACATCGATAGGCAGCAGCGTTTCACGTTGGTCGCGGCTGTGGCGTGTTCCTTCGGCGTTTGTGGCAGTCGTAGGCGGTGATT
CCGGTGTAGCTGCAGCGATCTCACCTGATCGCGTGGACAGCGGTGGTGGGTGGTTGTTTCCTCTGTTTTCCGGCGTTTCACGTAGTGGTTCTTGGCGTTATCGGCGAGTT
GGAGTAGTGGGTCTAAGAGTTTTAGCGGTTGCGAAGCGATTCCGTCTTTGGCTGGCCAAGGACAACCGGGAGGAGATAGGACCAGGAAAGGGATCGAGAGGGAGACCATA
CCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGCCGAGGCCGAGGCCGACCACTCGGCCCGTTTGCACGGGCCGAGTCCGTTTGCCTCCGC
TCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGCGGTGTGGCCTACACCACACC
GGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTCATTGTTGATGTCACGTGAAGGGCAGGTGGATTGCTTGGCCAAATTTTGGCA
TCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGAATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTCAGAGACCAAAGGGAAGCCTCGGGTAC
GAGCAGAAAGCGCCGAGCCAGATTGGATTCGACCTCGCGGAAGAACTAGAGGTCAGATCCGACATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCTCAATCG
CAAAAAGGCCCACGAAAGTTCACCGCTAAAGACAGCGCCAGTTACGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCGACCAGAG
GCCAAGGAGCCACAGGGCTGTGCGGAACCAAGAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCCTTTGAACAGGTCTTGGCCGCAATACAGGACACAAATTTGT
TGAAACGCCCAGAAAAGTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGG
GACGAGATAGAAGCCCTAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCTGCT
ATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACA
GGAAGGCTCAAGCAACGTCGACCTTGGGAGATGGCTGA
Protein sequenceShow/hide protein sequence
MNQLRAAVIVTFLSFGLGLDFRRKTQAFGLGLGITTVSPLTDLQYNFHLPKIQANGFEFELPLVPAISCSSQPQPPTSTFSTISALFCNLASQISPIDLLGIRRNCIQIV
QFIGNPLPFFFFLGTRSAASSCPISGDVHQRSSSERDSSDELHGDATSIGSSVSRWSRLWRVPSAFVAVVGGDSGVAAAISPDRVDSGGGWLFPLFSGVSRSGSWRYRRV
GVVGLRVLAVAKRFRLWLAKDNREEIGPGKGSRGRPYRRAGPTWPDPYGRPRPWPRPRPTTRPVCTGRVRLPPLGPYRFQLPRSSLLRPRTPPNPRSPSRHRRRCGLHHT
GVQRFLLVLQVTSSPASTNSLLMSREGQVDCLAKFWHQQLAPSVGKNACQFESHIGGGLQDGSGSETKGKPRVRAESAEPDWIRPRGRTRGQIRHEHSSANGRGRAEAQS
QKGPRKFTAKDSASYDERLLNSISKSSPWPKAEADQRPRSHRAVRNQEARFDRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLR
DEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANLLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSTLGDG