; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039125 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039125
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L13
Genome locationchr2:36443603..36449092
RNA-Seq ExpressionLag0039125
SyntenyLag0039125
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001380 - Ribosomal protein L13e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141234.1 60S ribosomal protein L13-1 [Momordica charantia]2.3e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

XP_022969755.1 60S ribosomal protein L13-3-like [Cucurbita maxima]7.8e-3488.24Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRNV QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

XP_022990054.1 60S ribosomal protein L13-1-like [Cucurbita maxima]2.3e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

XP_023550831.1 60S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo]2.3e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

XP_038878048.1 60S ribosomal protein L13-3 [Benincasa hispida]2.3e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

TrEMBL top hitse value%identityAlignment
A0A6J1E5R8 60S ribosomal protein L131.1e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

A0A6J1FUT5 60S ribosomal protein L131.1e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

A0A6J1I0U7 60S ribosomal protein L133.8e-3488.24Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRNV QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

A0A6J1J2K7 60S ribosomal protein L131.1e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

A0A6J1JSD3 60S ribosomal protein L131.1e-3387.06Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPSGHFRKHWQNYVRTWFNQPA +TRRRN  QEKAVKN PRPTAGP RPIVHGQTLKYNMKVRAGRGFSLEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

SwissProt top hitse value%identityAlignment
P41127 60S ribosomal protein L13-14.9e-3174.12Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

P41128 60S ribosomal protein L13-13.8e-3175.29Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPTAGP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

P41129 60S ribosomal protein L13-22.2e-3175.29Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPTAGP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

P49627 60S ribosomal protein L138.7e-2876.62Show/hide
Query:  SGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        +GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPTAG  RPIVHGQTLKYNMKVR+GRGFSLEELK   +P
Subjt:  SGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

Q9FF90 60S ribosomal protein L13-35.8e-3277.65Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPS HFRKHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVRAG+GF+LEELKV  +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

Arabidopsis top hitse value%identityAlignment
AT3G49010.1 breast basic conserved 13.5e-3274.12Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

AT3G49010.2 breast basic conserved 13.5e-3274.12Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

AT3G49010.3 breast basic conserved 13.5e-3274.12Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

AT3G49010.4 breast basic conserved 13.5e-3274.12Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIP+GHF+KHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVR G+GF+LEELK   +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP

AT5G23900.1 Ribosomal protein L13e family protein4.2e-3377.65Show/hide
Query:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP
        MKH NVIPS HFRKHWQNYV+TWFNQPA +TRRR   Q+KAVK  PRPT+GP RP+VHGQTLKYNMKVRAG+GF+LEELKV  +P
Subjt:  MKH-NVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCACAATGTTATCCCTAGTGGGCACTTTAGAAAGCACTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCCACGGAAACAAGGAGAAGGAATGTTCATCA
AGAAAAGGCTGTGAAAAATTTACCTCGGCCTACTGCTGGACCACCTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCT
CTTTGGAAGAGTTGAAGGTGATGTTGCTTCCATCCAATCCTCTTGATGCAGAAATATTATATATGCTTGAAGGTCAACTTCCTCGTTTACACCAAATGATGGAATCAGAA
ATCCTTGTACCTGCTGATGGGCTCAAACTGAACCTTCAATGTCAATTACAGGAGAAATACTTGGAGGTGGTGGAATTGTTGTATGATCTGAAGCGGCTATTTTCTCTTGC
CCAAAAGTTTGGGTATTCTGATTGGATTCAATTTGATGCATCCATTGTCTGTGTGGCCTTGCTTATTACATTGGTTCTTCAAGTTCGATGTACGAGCAAGATTATGCTGA
CAAGAATTGAAGCTGCATGCCAAATTTCTACCTCTTTCCTTCTGATTATGGCTGAAGAATCCTCCAACTCCATTTATGATTTCACTATCAAGGATATTCGTGGAAATTAT
GCATTAATTGCATTAAAGAAGGGTGCTCAATTGCTTAAATATGGTCATAAAGAAAAGCCAAAGTTTTGCCCATTCAGACTTTCTAGTGGTGCGTTCCTTCTAGCCATTTG
CATGTTTCATTCTCATGTCATGGAGTTCTGTATTTATGTTATTTGTCCTTTATATTATAGATTTACACAGCAAGAGTTTCCTGCTTGCAAACCAATTTTAACACTAGAAT
GGGTTGGTTTTGGATATATATTATATGTTCTAACCCATTTGGAAGAATGGAACCTTTGGAAATCATTTTGTGCAAAATCTGTTGTTGGACGACTTGAGGGAGCAAATTCT
GTGCTGCAGCAAAAACTGGGAGAAAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCACAATGTTATCCCTAGTGGGCACTTTAGAAAGCACTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCCACGGAAACAAGGAGAAGGAATGTTCATCA
AGAAAAGGCTGTGAAAAATTTACCTCGGCCTACTGCTGGACCACCTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCT
CTTTGGAAGAGTTGAAGGTGATGTTGCTTCCATCCAATCCTCTTGATGCAGAAATATTATATATGCTTGAAGGTCAACTTCCTCGTTTACACCAAATGATGGAATCAGAA
ATCCTTGTACCTGCTGATGGGCTCAAACTGAACCTTCAATGTCAATTACAGGAGAAATACTTGGAGGTGGTGGAATTGTTGTATGATCTGAAGCGGCTATTTTCTCTTGC
CCAAAAGTTTGGGTATTCTGATTGGATTCAATTTGATGCATCCATTGTCTGTGTGGCCTTGCTTATTACATTGGTTCTTCAAGTTCGATGTACGAGCAAGATTATGCTGA
CAAGAATTGAAGCTGCATGCCAAATTTCTACCTCTTTCCTTCTGATTATGGCTGAAGAATCCTCCAACTCCATTTATGATTTCACTATCAAGGATATTCGTGGAAATTAT
GCATTAATTGCATTAAAGAAGGGTGCTCAATTGCTTAAATATGGTCATAAAGAAAAGCCAAAGTTTTGCCCATTCAGACTTTCTAGTGGTGCGTTCCTTCTAGCCATTTG
CATGTTTCATTCTCATGTCATGGAGTTCTGTATTTATGTTATTTGTCCTTTATATTATAGATTTACACAGCAAGAGTTTCCTGCTTGCAAACCAATTTTAACACTAGAAT
GGGTTGGTTTTGGATATATATTATATGTTCTAACCCATTTGGAAGAATGGAACCTTTGGAAATCATTTTGTGCAAAATCTGTTGTTGGACGACTTGAGGGAGCAAATTCT
GTGCTGCAGCAAAAACTGGGAGAAAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACTGA
Protein sequenceShow/hide protein sequence
MKHNVIPSGHFRKHWQNYVRTWFNQPATETRRRNVHQEKAVKNLPRPTAGPPRPIVHGQTLKYNMKVRAGRGFSLEELKVMLLPSNPLDAEILYMLEGQLPRLHQMMESE
ILVPADGLKLNLQCQLQEKYLEVVELLYDLKRLFSLAQKFGYSDWIQFDASIVCVALLITLVLQVRCTSKIMLTRIEAACQISTSFLLIMAEESSNSIYDFTIKDIRGNY
ALIALKKGAQLLKYGHKEKPKFCPFRLSSGAFLLAICMFHSHVMEFCIYVICPLYYRFTQQEFPACKPILTLEWVGFGYILYVLTHLEEWNLWKSFCAKSVVGRLEGANS
VLQQKLGEKLPHHSSLANFMN