; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039134 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039134
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr2:36675736..36679467
RNA-Seq ExpressionLag0039134
SyntenyLag0039134
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.1e-11651.59Show/hide
Query:  RSSSQQADPRDHQPSKPIIQET-QQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMK
        RS S++    +  P   + +   +Q +KP     +I+E    N  + E   L+ RS++++ +P        + M+VM+T+  T E+RMAE+++ ++ LMK
Subjt:  RSSSQQADPRDHQPSKPIIQET-QQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMK

Query:  AIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHP
        A+EE+D +I  LK+ IE++  AESS T  +KN +KGK I+Q+ QPQ S SIASLS+QQLQ+MI N I+ QYGG  Q   LYSKPYTKRIDN+R P GY P
Subjt:  AIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHP

Query:  PKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINR
        PKFQQFDGKGNPKQH+AHF+ETCE A                          EPESIDSWE+LER+FLNRFYSTRR VSM ELT TKQRKGE V++YINR
Subjt:  PKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINR

Query:  WRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK------------------------------
        WRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N D+L+P +RK                              
Subjt:  WRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK------------------------------

Query:  -----------EGRNDEETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI
                   EG     T++E  +K+YPFPD+D+PDML+QLLE QLI+LP+CKRP EM +V+DP    + R+
Subjt:  -----------EGRNDEETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.6e-12843.18Show/hide
Query:  NQQPIIQEINKQQADHPRRSSSQQADPRDHQPSKPIIQETQQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRT
        N    + +I K+     R    Q ++  D  P +      ++ +KP     +I+E+H         ID    SS    KP+ E+    + M+VM+T   T
Subjt:  NQQPIIQEINKQQADHPRRSSSQQADPRDHQPSKPIIQETQQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRT

Query:  MEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSK
         E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS    VKN DKGK ++Q+ QPQ S SIASLS+QQLQ+MI + I+ QYGG  Q   LY K
Subjt:  MEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSK

Query:  PYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFEL
        PYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF++TCE A                          EPESID+WE+LER+FLNRFYSTR  VSM EL
Subjt:  PYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFEL

Query:  TNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK-------------
        TNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R  +D L+P  R              
Subjt:  TNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK-------------

Query:  -------------------------EGRND-----EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP----------------
                                 E ++D     + T++E  +K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDDP                
Subjt:  -------------------------EGRND-----EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSR
         +TSVFDRIKP TTR S FQR+S+   EEENQC     TR S  +RLS+ST KK R STS FDRLK+TNDQ +R+M + + K F E N D K+HS +PSR
Subjt:  -KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSR

Query:  MKRK
        MKRK
Subjt:  MKRK

KAA0058295.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-11755.66Show/hide
Query:  NKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQ
        +KP+ E+    + M+VM+T   T E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS   +VKN DKGK ++Q+ QPQ S SIASLS+QQLQ
Subjt:  NKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQ

Query:  DMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSW
        +MI + I+ QYGG  Q   LYSKPYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF+ETCE A                          EPESID+W
Subjt:  DMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSW

Query:  EELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASREN
        E+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R  
Subjt:  EELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASREN

Query:  QDILLPNMRK--------------------------------------EGRNDEE-----TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEE
        +D L+P  R                                       E ++D++     T++E  +K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+
Subjt:  QDILLPNMRK--------------------------------------EGRNDEE-----TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEE

Query:  MEKVDDPKTSVFDRI
         EKVDDP    + R+
Subjt:  MEKVDDPKTSVFDRI

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.5e-12140.56Show/hide
Query:  LNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQL
        L++ + E+    + M+VM+T   T E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS    VKN DKGK ++Q+ QPQ S SIASLS+QQL
Subjt:  LNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQL

Query:  QDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDS
        Q+MI + I+ QYGG  Q   LYSKPYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF+ETCE A                          EPESID+
Subjt:  QDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDS

Query:  WEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRE
        WE+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R 
Subjt:  WEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRE

Query:  NQDILLPNMR--KEGRND-----------------------------------------EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPE
         +D L+P  R  K   ND                                         + T++E  +K+YPF D+D+ DMLEQLLE QLI+LP+CKRP+
Subjt:  NQDILLPNMR--KEGRND-----------------------------------------EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPE

Query:  EMEKVDDP--------------------------------------------------------------------------------------------
        + EKVDDP                                                                                            
Subjt:  EMEKVDDP--------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLF
                         +TSVFDRIKP TTR S FQR+SM   EEENQC     TR S F+RLS+S SKK+R STS FDRLK+TNDQ +R+M +L+ K F
Subjt:  -----------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLF

Query:  DEVNSDKKLHSSIPSRMKRK
         E N D K+HS +PSRMKRK
Subjt:  DEVNSDKKLHSSIPSRMKRK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]2.4e-11652.35Show/hide
Query:  NKQQADHPRRSSSQQADPRDHQPSKPIIQETQQAN-------KPIIQEDHQA----NRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEE
        +K+ A     +S     P     SK IIQ   Q +       K +++           P+    D AS  S K   P        D M+VMM +   +E 
Subjt:  NKQQADHPRRSSSQQADPRDHQPSKPIIQETQQAN-------KPIIQEDHQA----NRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEE

Query:  RMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQP-QCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPY
         MAEM+  I+ LMK ++E+D +I  LK Q++ +  AESSQT VVK  DKGK +VQ++QP Q S S+ASLS+QQLQDMITN IRAQYGG +Q S +YSKPY
Subjt:  RMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQP-QCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPY

Query:  TKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTN
        TKRIDNLR P+GY PPKFQQFDGKGNPKQH+AHFVETCENA                          EPESI+SWE+LE+EFLNRFYSTRRTVSM ELTN
Subjt:  TKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTN

Query:  TKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMR----------------
        TKQRKGE V++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR  +D L+P ++                
Subjt:  TKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMR----------------

Query:  -----------------KEGRNDEE---------TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI
                         KE R +++         T++E  +K+YPFPD+DI DMLEQLLE QLI+LP+CKRPE+  KVDDP    + R+
Subjt:  -----------------KEGRNDEE---------TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein2.9e-11544.16Show/hide
Query:  DQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQP-QCSASIASLSIQQLQDMITN
        D+E+  ++  +M    T E  MAEM+  I+ LMK +EE+D +I  LK Q++    +ESSQT VVK  DKGK +V+++QP Q S S+ASLS+QQLQDMI N
Subjt:  DQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQP-QCSASIASLSIQQLQDMITN

Query:  CIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENAEPESIDSWEELEREFL-----NRFYSTRRTVSMFELTNT
         IRAQYGG  Q S +YSKPYTKRIDNLR P+GY P KFQQFDGKGNPKQHI HFVETCENA        ++L R+F+     N F  TRR VSM ELTNT
Subjt:  CIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENAEPESIDSWEELEREFL-----NRFYSTRRTVSMFELTNT

Query:  KQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMR-----------------
         QRKGE V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDM+LSIA+R  +D L+   R                 
Subjt:  KQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMR-----------------

Query:  --------------------KEGRN---DEE---TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP-------------------
                            K  RN   DE+   T+ E  KK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP                   
Subjt:  --------------------KEGRN---DEE---TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP-------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTND
                                       +TSVFD IKP TTR S FQR+SM   +EENQC   T  + SAF+RLS+S SKK R ST  FDRLK+TND
Subjt:  -------------------------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTND

Query:  QPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRK
        Q +R+M  L+ K F E N D K+HS +PSRMKRK
Subjt:  QPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRK

A0A5A7TZU9 Ribonuclease H5.2e-11751.59Show/hide
Query:  RSSSQQADPRDHQPSKPIIQET-QQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMK
        RS S++    +  P   + +   +Q +KP     +I+E    N  + E   L+ RS++++ +P        + M+VM+T+  T E+RMAE+++ ++ LMK
Subjt:  RSSSQQADPRDHQPSKPIIQET-QQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMK

Query:  AIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHP
        A+EE+D +I  LK+ IE++  AESS T  +KN +KGK I+Q+ QPQ S SIASLS+QQLQ+MI N I+ QYGG  Q   LYSKPYTKRIDN+R P GY P
Subjt:  AIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHP

Query:  PKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINR
        PKFQQFDGKGNPKQH+AHF+ETCE A                          EPESIDSWE+LER+FLNRFYSTRR VSM ELT TKQRKGE V++YINR
Subjt:  PKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINR

Query:  WRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK------------------------------
        WRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N D+L+P +RK                              
Subjt:  WRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK------------------------------

Query:  -----------EGRNDEETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI
                   EG     T++E  +K+YPFPD+D+PDML+QLLE QLI+LP+CKRP EM +V+DP    + R+
Subjt:  -----------EGRNDEETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDPKTSVFDRI

A0A5A7URH1 Ty3-gypsy retrotransposon protein1.7e-12843.18Show/hide
Query:  NQQPIIQEINKQQADHPRRSSSQQADPRDHQPSKPIIQETQQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRT
        N    + +I K+     R    Q ++  D  P +      ++ +KP     +I+E+H         ID    SS    KP+ E+    + M+VM+T   T
Subjt:  NQQPIIQEINKQQADHPRRSSSQQADPRDHQPSKPIIQETQQANKP-----IIQEDHQANRPIQEIIDLASRSSKKLNKPAQEDQEARDQMTVMMTETRT

Query:  MEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSK
         E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS    VKN DKGK ++Q+ QPQ S SIASLS+QQLQ+MI + I+ QYGG  Q   LY K
Subjt:  MEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITNCIRAQYGGLTQDSLLYSK

Query:  PYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFEL
        PYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF++TCE A                          EPESID+WE+LER+FLNRFYSTR  VSM EL
Subjt:  PYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSWEELEREFLNRFYSTRRTVSMFEL

Query:  TNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK-------------
        TNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R  +D L+P  R              
Subjt:  TNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRK-------------

Query:  -------------------------EGRND-----EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP----------------
                                 E ++D     + T++E  +K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDDP                
Subjt:  -------------------------EGRND-----EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEEMEKVDDP----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSR
         +TSVFDRIKP TTR S FQR+S+   EEENQC     TR S  +RLS+ST KK R STS FDRLK+TNDQ +R+M + + K F E N D K+HS +PSR
Subjt:  -KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSR

Query:  MKRK
        MKRK
Subjt:  MKRK

A0A5A7UXF0 Ty3-gypsy retrotransposon protein3.1e-11755.66Show/hide
Query:  NKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQ
        +KP+ E+    + M+VM+T   T E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS   +VKN DKGK ++Q+ QPQ S SIASLS+QQLQ
Subjt:  NKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQ

Query:  DMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSW
        +MI + I+ QYGG  Q   LYSKPYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF+ETCE A                          EPESID+W
Subjt:  DMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDSW

Query:  EELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASREN
        E+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R  
Subjt:  EELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASREN

Query:  QDILLPNMRK--------------------------------------EGRNDEE-----TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEE
        +D L+P  R                                       E ++D++     T++E  +K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+
Subjt:  QDILLPNMRK--------------------------------------EGRNDEE-----TIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPEE

Query:  MEKVDDPKTSVFDRI
         EKVDDP    + R+
Subjt:  MEKVDDPKTSVFDRI

A0A5D3BX77 Retrotransposon gag protein7.1e-12240.56Show/hide
Query:  LNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQL
        L++ + E+    + M+VM+T   T E RMAE+++ ++ LMK +EE+D +I  LK+ IE++  AESS    VKN DKGK ++Q+ QPQ S SIASLS+QQL
Subjt:  LNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQL

Query:  QDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDS
        Q+MI + I+ QYGG  Q   LYSKPYTKRIDNLR P GY PPKFQQFDGKGNPKQH+AHF+ETCE A                          EPESID+
Subjt:  QDMITNCIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENA--------------------------EPESIDS

Query:  WEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRE
        WE+LER+FLNRFYSTRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R 
Subjt:  WEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRE

Query:  NQDILLPNMR--KEGRND-----------------------------------------EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPE
         +D L+P  R  K   ND                                         + T++E  +K+YPF D+D+ DMLEQLLE QLI+LP+CKRP+
Subjt:  NQDILLPNMR--KEGRND-----------------------------------------EETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQCKRPE

Query:  EMEKVDDP--------------------------------------------------------------------------------------------
        + EKVDDP                                                                                            
Subjt:  EMEKVDDP--------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLF
                         +TSVFDRIKP TTR S FQR+SM   EEENQC     TR S F+RLS+S SKK+R STS FDRLK+TNDQ +R+M +L+ K F
Subjt:  -----------------KTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLF

Query:  DEVNSDKKLHSSIPSRMKRK
         E N D K+HS +PSRMKRK
Subjt:  DEVNSDKKLHSSIPSRMKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAAACAGCCAGGGATTCGGAGATTCAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGCCGATCATCCAAGAAGATCAACA
AGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAAGAAGGTCAACAAGCCAACAGGTCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATC
ATCAAGAGGATCAACAAGCTAACAAGCCAATTCGACAGATCATCAAGTCAATCGACCGATCAAGAAGATCAACAAACCGATCATCAAACCGATCATCCGAGAAGATCAAC
AAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATAAGCCGGCAGGCCG
ATCATCCAAGAAGATCATCAACCAGCAGCCGATCATCCAAGAAATCAACAAGCAACAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATC
AACCTAGCAAGCCGATCATCCAAGAAACTCAACAAGCCAACAAGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCGACCTAGCAAGCCGA
TCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAAGAAGCTAGAGACCAAATGACTGTCATGATGACTGAGACTAGAACTATGGAAGAAAGAATGGCTGAGATGCA
GGAGCATATCGACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGAACAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAG
TCGTAAAAAATCACGACAAAGGAAAGACTATAGTGCAAGATGATCAACCACAGTGTTCTGCTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAAC
TGTATCAGAGCTCAGTACGGTGGACTTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCGGGTATCATCCACCAAA
ATTTCAACAGTTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGTGAGAACGCTGAACCTGAGTCAATAGACAGTTGGGAGGAACTCGAAA
GAGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGG
AGAGCTATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGTATTCAAGGCATGCACTGGGAGCTCCTCTACATCCTTAAAGGTATAAAGCC
TCGCACCTTTGAGGAACTTGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACATTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACG
ACGAAGAGACTATAGAAGAATCTATGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGCTGGAACAATTACTGGAAGCACAACTGATAGAGCTTCCTCAG
TGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGT
CGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCT
TTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCG
TCACGTATGAAGAGGAAGTTTCTGTTCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAAACAGCCAGGGATTCGGAGATTCAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGCCGATCATCCAAGAAGATCAACA
AGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAAGAAGGTCAACAAGCCAACAGGTCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATC
ATCAAGAGGATCAACAAGCTAACAAGCCAATTCGACAGATCATCAAGTCAATCGACCGATCAAGAAGATCAACAAACCGATCATCAAACCGATCATCCGAGAAGATCAAC
AAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATAAGCCGGCAGGCCG
ATCATCCAAGAAGATCATCAACCAGCAGCCGATCATCCAAGAAATCAACAAGCAACAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATC
AACCTAGCAAGCCGATCATCCAAGAAACTCAACAAGCCAACAAGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCGACCTAGCAAGCCGA
TCATCCAAGAAGCTCAACAAACCAGCCCAAGAAGATCAAGAAGCTAGAGACCAAATGACTGTCATGATGACTGAGACTAGAACTATGGAAGAAAGAATGGCTGAGATGCA
GGAGCATATCGACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGAACAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAG
TCGTAAAAAATCACGACAAAGGAAAGACTATAGTGCAAGATGATCAACCACAGTGTTCTGCTTCGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAAC
TGTATCAGAGCTCAGTACGGTGGACTTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCGGGTATCATCCACCAAA
ATTTCAACAGTTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATGTGAGAACGCTGAACCTGAGTCAATAGACAGTTGGGAGGAACTCGAAA
GAGAGTTTTTGAATCGCTTCTACAGCACTAGACGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGG
AGAGCTATGAGTCTAGATTGCAAAGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGTATTCAAGGCATGCACTGGGAGCTCCTCTACATCCTTAAAGGTATAAAGCC
TCGCACCTTTGAGGAACTTGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACATTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACG
ACGAAGAGACTATAGAAGAATCTATGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGCTGGAACAATTACTGGAAGCACAACTGATAGAGCTTCCTCAG
TGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGT
CGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCT
TTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCG
TCACGTATGAAGAGGAAGTTTCTGTTCTCATAA
Protein sequenceShow/hide protein sequence
MFENSQGFGDSDQRTQSPENSARVQSHQKPIIQEDQQANRPIQEIINLTDRSSKKVNKPTGRSSRRSTSQQADHQEDQQANKPIRQIIKSIDRSRRSTNRSSNRSSEKIN
KSADRSSKKINKPTGRSSKKINKSQQADPRDHKPAGRSSKKIINQQPIIQEINKQQADHPRRSSSQQADPRDHQPSKPIIQETQQANKPIIQEDHQANRPIQEIIDLASR
SSKKLNKPAQEDQEARDQMTVMMTETRTMEERMAEMQEHIDTLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKTIVQDDQPQCSASIASLSIQQLQDMITN
CIRAQYGGLTQDSLLYSKPYTKRIDNLRTPIGYHPPKFQQFDGKGNPKQHIAHFVETCENAEPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVNYINRW
RAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDILLPNMRKEGRNDEETIEESMKKIYPFPDADIPDMLEQLLEAQLIELPQ
CKRPEEMEKVDDPKTSVFDRIKPPTTRPSAFQRMSMVATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIP
SRMKRKFLFS