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Lag0039138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr2:36734517..36735936
RNA-Seq ExpressionLag0039138
SyntenyLag0039138
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.5e-0737.93Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG
        +K  K + + T+ ++E R E  +   P        L A KGF        G LP F+   I  H W+ FCA PE     +VREFYAN+       V VRG
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG

Query:  VEVDWSPSAINALYNL
        V+V WS  AINA++ L
Subjt:  VEVDWSPSAINALYNL

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]9.4e-1042.57Show/hide
Query:  LGAFKGFNGD------LPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQL
        L A KGF GD       P F+   I  H W+LFCA PE + A +VREFYAN+   D   V VRGV+V  S  AIN +Y L + P   ++E   A +  +L
Subjt:  LGAFKGFNGD------LPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQL

Query:  S
        +
Subjt:  S

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.4e-0736.21Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG
        +K  K + + T+ ++      I   P         L A KGF        G LP F+   I  H W+ FCA PE     +VREFYAN+   +   V VRG
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG

Query:  VEVDWSPSAINALYNL
        V+V WS  AINA++ L
Subjt:  VEVDWSPSAINALYNL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]3.7e-0635.78Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGFNGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSP
        +K  K + + T+ +     E I  +P N  A  G L       G  P F+   I  H W  FCA PE     +VREFYAN+   +   V VRGV+V W+ 
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGFNGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSP

Query:  SAINALYNL
         AIN ++ L
Subjt:  SAINALYNL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]3.4e-0738.26Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF----NGDL--PQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGV
        +K  K + + ++ ++EAR E  +   P        LGA KGF    N  L  P F+   I  H W+LFCA  E     +VREFYAN+   +   V V+GV
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF----NGDL--PQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGV

Query:  EVDWSPSAINALYNL
        +V WS  AIN L+ L
Subjt:  EVDWSPSAINALYNL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.6e-0737.93Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG
        +K  K + + T+ ++E R E  +   P        L A KGF        G LP F+   I  H W+ FCA PE     +VREFYAN+       V VRG
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG

Query:  VEVDWSPSAINALYNL
        V+V WS  AINA++ L
Subjt:  VEVDWSPSAINALYNL

A0A2P5B0K0 Uncharacterized protein4.6e-1042.57Show/hide
Query:  LGAFKGFNGD------LPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQL
        L A KGF GD       P F+   I  H W+LFCA PE + A +VREFYAN+   D   V VRGV+V  S  AIN +Y L + P   ++E   A +  +L
Subjt:  LGAFKGFNGD------LPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQL

Query:  S
        +
Subjt:  S

A0A2P5BCG4 Uncharacterized protein (Fragment)2.1e-0736.21Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG
        +K  K + + T+ ++      I   P         L A KGF        G LP F+   I  H W+ FCA PE     +VREFYAN+   +   V VRG
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF-------NGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG

Query:  VEVDWSPSAINALYNL
        V+V WS  AINA++ L
Subjt:  VEVDWSPSAINALYNL

A0A2P5EK98 Uncharacterized protein (Fragment)1.8e-0635.78Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGFNGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSP
        +K  K + + T+ +     E I  +P N  A  G L       G  P F+   I  H W  FCA PE     +VREFYAN+   +   V VRGV+V W+ 
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGFNGDLPQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSP

Query:  SAINALYNL
         AIN ++ L
Subjt:  SAINALYNL

A0A2P5EYL5 Uncharacterized protein1.6e-0738.26Show/hide
Query:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF----NGDL--PQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGV
        +K  K + + ++ ++EAR E  +   P        LGA KGF    N  L  P F+   I  H W+LFCA  E     +VREFYAN+   +   V V+GV
Subjt:  KKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGF----NGDL--PQFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGV

Query:  EVDWSPSAINALYNL
        +V WS  AIN L+ L
Subjt:  EVDWSPSAINALYNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACAGAGCAGAAAGAAAGAGAGAATGAGGAGAAGAGGTACCGTTACCCCTGAAGTACAGAAGGAAAACGAAAAAGAAAAGACGCCGAGGAGAAAGAAGCAAAG
AGAAGAGAAGCAACAGAGGGCTGAGGATAAGAAGGCTACAGAGGACAGAGGCTGCCACAGTAGGAAGAAGACCCGCAAGAATCTGATGTACAGAACCCAGAGGAGTTCGG
AGGCTCGTGTTGAGGTCATCATGCCTGAACCGCCAAACGTCGCCGCATTAAGCGGAAGGCTGGGCGCATTCAAAGGATTCAACGGTGATCTTCCGCAGTTTCTGAGGACC
GGAATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCGCAGGTGGTGCGCGAATTTTATGCTAACATTGACAAAGAAGATGGTTTCCAGGT
GATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCTAGTGCTATCAACGCACTGTATAATCTTCAGAACTTCCCCCATGCGGCATATAATGAGATGGCTGTAGCGCCATCTA
ATGAGCAGTTAAGTGATGCTGTGCGGGAGAAGAGTAGGGGTTCCATGGATGAGGGAGATGTGATTCTGTTTGACAAGGGAATCATCGACACGCCCAATTTGGCAGGCTCC
AGTGTATGCAGGAGGTACGTCAAGGTGGGCTTATCTACGCATCAACTCGATTCTAGAACAACTGACACTTTCGGCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACAGAGCAGAAAGAAAGAGAGAATGAGGAGAAGAGGTACCGTTACCCCTGAAGTACAGAAGGAAAACGAAAAAGAAAAGACGCCGAGGAGAAAGAAGCAAAG
AGAAGAGAAGCAACAGAGGGCTGAGGATAAGAAGGCTACAGAGGACAGAGGCTGCCACAGTAGGAAGAAGACCCGCAAGAATCTGATGTACAGAACCCAGAGGAGTTCGG
AGGCTCGTGTTGAGGTCATCATGCCTGAACCGCCAAACGTCGCCGCATTAAGCGGAAGGCTGGGCGCATTCAAAGGATTCAACGGTGATCTTCCGCAGTTTCTGAGGACC
GGAATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCGCAGGTGGTGCGCGAATTTTATGCTAACATTGACAAAGAAGATGGTTTCCAGGT
GATTGTCCGAGGAGTCGAGGTAGATTGGAGTCCTAGTGCTATCAACGCACTGTATAATCTTCAGAACTTCCCCCATGCGGCATATAATGAGATGGCTGTAGCGCCATCTA
ATGAGCAGTTAAGTGATGCTGTGCGGGAGAAGAGTAGGGGTTCCATGGATGAGGGAGATGTGATTCTGTTTGACAAGGGAATCATCGACACGCCCAATTTGGCAGGCTCC
AGTGTATGCAGGAGGTACGTCAAGGTGGGCTTATCTACGCATCAACTCGATTCTAGAACAACTGACACTTTCGGCCAGTAG
Protein sequenceShow/hide protein sequence
MAKQSRKKERMRRRGTVTPEVQKENEKEKTPRRKKQREEKQQRAEDKKATEDRGCHSRKKTRKNLMYRTQRSSEARVEVIMPEPPNVAALSGRLGAFKGFNGDLPQFLRT
GIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQLSDAVREKSRGSMDEGDVILFDKGIIDTPNLAGS
SVCRRYVKVGLSTHQLDSRTTDTFGQ