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Lag0039149 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039149
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC103504559
Genome locationchr2:37287705..37293393
RNA-Seq ExpressionLag0039149
SyntenyLag0039149
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8732065.1 hypothetical protein F3Y22_tig00002237pilonHSYRG00137 [Hibiscus syriacus]4.9e-1064.52Show/hide
Query:  SRAKLSTF--KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMMEDFKCALNRD
        SR KL  +  K++LQCL+RA+RN+NPKLLMAASALLLP++P  VSA+HTGMME  K  L  D
Subjt:  SRAKLSTF--KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMMEDFKCALNRD

KAG7032579.1 hypothetical protein SDJN02_06628, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-0977.55Show/hide
Query:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        A  +   T   CLT ALRNDNPKLLMAASA LLPLRPFTVSALHTGMME
Subjt:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

RDY06102.1 gag-pol, partial [Mucuna pruriens]1.2e-1146.23Show/hide
Query:  FPHSTSIPSLDIECPSTMPSRTMKRHFSQFNNKFVFSHLYNTSLRLDKQCSKDSPDTEKSSTKISTVLSTISEKIAIMHHQKVVDALHKLKGILLNANVL
        F  STS+P LD  CPST+PS TMK HFS+ + +FVF HL NT  R  +  S DS  T KSS K      + SEKI ++    V+D LH+   I + A V 
Subjt:  FPHSTSIPSLDIECPSTMPSRTMKRHFSQFNNKFVFSHLYNTSLRLDKQCSKDSPDTEKSSTKISTVLSTISEKIAIMHHQKVVDALHKLKGILLNANVL

Query:  YEHVKV
           VKV
Subjt:  YEHVKV

XP_022959909.1 uncharacterized protein LOC111460821 [Cucurbita moschata]5.4e-0977.55Show/hide
Query:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        A  +   T   CLT ALRNDNPKLLMAASA LLPLRPFTVSALHTGMME
Subjt:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

XP_023522095.1 uncharacterized protein LOC111785971 [Cucurbita pepo subsp. pepo]2.2e-1088.37Show/hide
Query:  KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        +TILQCLT ALRNDNP++LMAASA LLPLRPFTVSALHTGMME
Subjt:  KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

TrEMBL top hitse value%identityAlignment
A0A371HTJ2 Gag-pol (Fragment)5.6e-1246.23Show/hide
Query:  FPHSTSIPSLDIECPSTMPSRTMKRHFSQFNNKFVFSHLYNTSLRLDKQCSKDSPDTEKSSTKISTVLSTISEKIAIMHHQKVVDALHKLKGILLNANVL
        F  STS+P LD  CPST+PS TMK HFS+ + +FVF HL NT  R  +  S DS  T KSS K      + SEKI ++    V+D LH+   I + A V 
Subjt:  FPHSTSIPSLDIECPSTMPSRTMKRHFSQFNNKFVFSHLYNTSLRLDKQCSKDSPDTEKSSTKISTVLSTISEKIAIMHHQKVVDALHKLKGILLNANVL

Query:  YEHVKV
           VKV
Subjt:  YEHVKV

A0A5D3E3V3 Uncharacterized protein3.4e-0994.74Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CLT AL+NDNPKLLMAASALLLPLRPFTVSALHTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

A0A6A3CR88 Uncharacterized protein2.4e-1064.52Show/hide
Query:  SRAKLSTF--KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMMEDFKCALNRD
        SR KL  +  K++LQCL+RA+RN+NPKLLMAASALLLP++P  VSA+HTGMME  K  L  D
Subjt:  SRAKLSTF--KTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMMEDFKCALNRD

A0A6J1H9F5 uncharacterized protein LOC1114608212.6e-0977.55Show/hide
Query:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        A  +   T   CLT ALRNDNPKLLMAASA LLPLRPFTVSALHTGMME
Subjt:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

A0A6J1JJG8 uncharacterized protein LOC1114874942.6e-0977.55Show/hide
Query:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        A  +   T   CLT ALRNDNPKLLMAASA LLPLRPFTVSALHTGMME
Subjt:  AKLSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23110.1 unknown protein1.2e-0976.32Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CL+RALRN+NPK LMAASAL+LP +P  VSA+HTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

AT1G23110.2 unknown protein1.2e-0976.32Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CL+RALRN+NPK LMAASAL+LP +P  VSA+HTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

AT1G23110.3 unknown protein1.2e-0976.32Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CL+RALRN+NPK LMAASAL+LP +P  VSA+HTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

AT1G23110.4 unknown protein1.2e-0976.32Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CL+RALRN+NPK LMAASAL+LP +P  VSA+HTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME

AT1G23110.5 unknown protein1.2e-0976.32Show/hide
Query:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME
        CL+RALRN+NPK LMAASAL+LP +P  VSA+HTGMME
Subjt:  CLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCCACTTTTCCCCACTCCACCTCAATTCCATCCTTAGACATTGAATGTCCTAGTACAATGCCTTCTCGTACCATGAAAAGACACTTCTCCCAGTTCAACAACAA
GTTTGTCTTCTCACATCTCTACAACACAAGTTTAAGGTTAGATAAACAATGCTCAAAAGACTCCCCAGATACTGAGAAGTCATCCACAAAGATCTCTACTGTCCTCTCCA
CCATATCCGAGAAGATTGCTATCATGCATCATCAAAAGGTTGTAGACGCATTGCACAAGCTGAAGGGAATTCTTCTAAATGCAAACGTTTTGTACGAGCATGTGAAGGTA
TGGCAACGGGGCGGGGAAGGGTCGGGGACGCACTTCTCATCCCCGATTGGGGACCCGAAAAGGATCCCAAATTTGACCCCCATGCCCGGTCAAACCAGGGATTCCTCGAC
CCCGGGGGGATTTTGGCCATCCATACTCCATTATTTGTTACACACTGGACAAGACTCACCCAGTTGTTGTCACATATGGTCGCTTTTGTCACCCTCCGACTACTGGTTGT
CGTTGACCTATGCTGCTGTCGACCTCCAACAACCCGCCACTGCCGGCGAATTTTCCGGCAGTTTATCGACAACTCTTCTAGTGACTTTTCTCACGATCTCCGACGACGAC
GTTGACTATTCTACCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTC
GGCTGTTTGGACTCTTCGCCGCAGATTCCTCTCTTCTCGAAGGCGGCGACTGGACGACAGTGGTAAGGCGACACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGG
CGGCAACTGGTAAGGCGACACCAAACCTCAGCGACGGAGCAAGGCGGCGACTGGCAGCGTGGGTTTCGACAGAAGGCGGCGACCGGCAGCTAGTAGTTTCTAGAGCCAAA
CTTTCAACATTCAAAACTATCTTGCAGTGTCTGACAAGAGCTCTCAGAAATGACAACCCAAAGTTGTTGATGGCTGCATCTGCATTATTGTTGCCTTTGAGGCCTTTTAC
GGTTTCTGCTCTTCACACTGGGATGATGGAGGATTTCAAATGTGCCCTCAACAGAGATGAAAACCATGATAAGGAAATTCATAGGATTTCAAATGTGCCCTCAACAACGT
GGGTTTTCAAAAAATTCAATTGTTTTACTTGGGAGCTTACTGCGATTTTGATGAAATTTATCTCTTCACTCAAAGCTCTAGGTATCAGTGTTGCACTTCTTCTCTCTCTC
ACTCTCATCGATGTTGCAACTCTACCTTCGTGGGTAGCATTTTTTCGAAGTCGGAAGGTGGTGGCGTTGGGAGAGACGATGAAGTGTGGTGACCACGAGTTTAAACTTGA
ATGTTGTGTTGCCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCCACTTTTCCCCACTCCACCTCAATTCCATCCTTAGACATTGAATGTCCTAGTACAATGCCTTCTCGTACCATGAAAAGACACTTCTCCCAGTTCAACAACAA
GTTTGTCTTCTCACATCTCTACAACACAAGTTTAAGGTTAGATAAACAATGCTCAAAAGACTCCCCAGATACTGAGAAGTCATCCACAAAGATCTCTACTGTCCTCTCCA
CCATATCCGAGAAGATTGCTATCATGCATCATCAAAAGGTTGTAGACGCATTGCACAAGCTGAAGGGAATTCTTCTAAATGCAAACGTTTTGTACGAGCATGTGAAGGTA
TGGCAACGGGGCGGGGAAGGGTCGGGGACGCACTTCTCATCCCCGATTGGGGACCCGAAAAGGATCCCAAATTTGACCCCCATGCCCGGTCAAACCAGGGATTCCTCGAC
CCCGGGGGGATTTTGGCCATCCATACTCCATTATTTGTTACACACTGGACAAGACTCACCCAGTTGTTGTCACATATGGTCGCTTTTGTCACCCTCCGACTACTGGTTGT
CGTTGACCTATGCTGCTGTCGACCTCCAACAACCCGCCACTGCCGGCGAATTTTCCGGCAGTTTATCGACAACTCTTCTAGTGACTTTTCTCACGATCTCCGACGACGAC
GTTGACTATTCTACCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTC
GGCTGTTTGGACTCTTCGCCGCAGATTCCTCTCTTCTCGAAGGCGGCGACTGGACGACAGTGGTAAGGCGACACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGG
CGGCAACTGGTAAGGCGACACCAAACCTCAGCGACGGAGCAAGGCGGCGACTGGCAGCGTGGGTTTCGACAGAAGGCGGCGACCGGCAGCTAGTAGTTTCTAGAGCCAAA
CTTTCAACATTCAAAACTATCTTGCAGTGTCTGACAAGAGCTCTCAGAAATGACAACCCAAAGTTGTTGATGGCTGCATCTGCATTATTGTTGCCTTTGAGGCCTTTTAC
GGTTTCTGCTCTTCACACTGGGATGATGGAGGATTTCAAATGTGCCCTCAACAGAGATGAAAACCATGATAAGGAAATTCATAGGATTTCAAATGTGCCCTCAACAACGT
GGGTTTTCAAAAAATTCAATTGTTTTACTTGGGAGCTTACTGCGATTTTGATGAAATTTATCTCTTCACTCAAAGCTCTAGGTATCAGTGTTGCACTTCTTCTCTCTCTC
ACTCTCATCGATGTTGCAACTCTACCTTCGTGGGTAGCATTTTTTCGAAGTCGGAAGGTGGTGGCGTTGGGAGAGACGATGAAGTGTGGTGACCACGAGTTTAAACTTGA
ATGTTGTGTTGCCTTCTGA
Protein sequenceShow/hide protein sequence
MISTFPHSTSIPSLDIECPSTMPSRTMKRHFSQFNNKFVFSHLYNTSLRLDKQCSKDSPDTEKSSTKISTVLSTISEKIAIMHHQKVVDALHKLKGILLNANVLYEHVKV
WQRGGEGSGTHFSSPIGDPKRIPNLTPMPGQTRDSSTPGGFWPSILHYLLHTGQDSPSCCHIWSLLSPSDYWLSLTYAAVDLQQPATAGEFSGSLSTTLLVTFLTISDDD
VDYSTATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRRRFLSSRRRRLDDSGKATPNLVRLFRLVCKAATGKATPNLSDGARRRLAAWVSTEGGDRQLVVSRAK
LSTFKTILQCLTRALRNDNPKLLMAASALLLPLRPFTVSALHTGMMEDFKCALNRDENHDKEIHRISNVPSTTWVFKKFNCFTWELTAILMKFISSLKALGISVALLLSL
TLIDVATLPSWVAFFRSRKVVALGETMKCGDHEFKLECCVAF