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Lag0039150 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039150
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr2:37383478..37385045
RNA-Seq ExpressionLag0039150
SyntenyLag0039150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.3e-0828.92Show/hide
Query:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDG-FGEVQTKLFWKLHRLCYNEPVFPAAVASDTKQCSPKSATEINFLIEGRQRAS
        K P++    ED+ +YLM   RR +PLKI LH K  VIEKI+ NL D      +  +F     L          +    + C PKS +++ FLI GR    
Subjt:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDG-FGEVQTKLFWKLHRLCYNEPVFPAAVASDTKQCSPKSATEINFLIEGRQRAS

Query:  ERRP---------------SHQK---------TYFEGEKTVSR---------------------------------RQDTVNVKMEHIEMVDDEELFNNY
          R                +H+           YFE  KTV+R                                 +Q+  +V  +HI MVDD+E+F+ Y
Subjt:  ERRP---------------SHQK---------TYFEGEKTVSR---------------------------------RQDTVNVKMEHIEMVDDEELFNNY

Query:  PWGR
        PWGR
Subjt:  PWGR
KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]1.2e-0430.77Show/hide
Query:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDGFGEVQTKLFWKLHRLCYNEPVFP----------AAVASDTKQCSPKSATEINF
        K P++    ED+ +YLM   RR +PLKI LH K  VIEKI+ NL D           +L   C   P               V  +  +   +    + F
Subjt:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDGFGEVQTKLFWKLHRLCYNEPVFP----------AAVASDTKQCSPKSATEINF

Query:  LIEGRQRASERRPSHQKTYFEGEKTVSRRQDTVNVKMEHIEMVDDEELFNNYPWGR
         I       + +    K YF  E  +  +Q+ ++V  ++I MVDD+E+F+ YPWGR
Subjt:  LIEGRQRASERRPSHQKTYFEGEKTVSRRQDTVNVKMEHIEMVDDEELFNNYPWGR
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.1e-0828.92Show/hide
Query:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDG-FGEVQTKLFWKLHRLCYNEPVFPAAVASDTKQCSPKSATEINFLIEGRQRAS
        K P++    ED+ +YLM   RR +PLKI LH K  VIEKI+ NL D      +  +F     L          +    + C PKS +++ FLI GR    
Subjt:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDG-FGEVQTKLFWKLHRLCYNEPVFPAAVASDTKQCSPKSATEINFLIEGRQRAS

Query:  ERRP---------------SHQK---------TYFEGEKTVSR---------------------------------RQDTVNVKMEHIEMVDDEELFNNY
          R                +H+           YFE  KTV+R                                 +Q+  +V  +HI MVDD+E+F+ Y
Subjt:  ERRP---------------SHQK---------TYFEGEKTVSR---------------------------------RQDTVNVKMEHIEMVDDEELFNNY

Query:  PWGR
        PWGR
Subjt:  PWGR
A0A5A7UD30 Protein Ycf2-like5.8e-0530.77Show/hide
Query:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDGFGEVQTKLFWKLHRLCYNEPVFP----------AAVASDTKQCSPKSATEINF
        K P++    ED+ +YLM   RR +PLKI LH K  VIEKI+ NL D           +L   C   P               V  +  +   +    + F
Subjt:  KTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDGFGEVQTKLFWKLHRLCYNEPVFP----------AAVASDTKQCSPKSATEINF

Query:  LIEGRQRASERRPSHQKTYFEGEKTVSRRQDTVNVKMEHIEMVDDEELFNNYPWGR
         I       + +    K YF  E  +  +Q+ ++V  ++I MVDD+E+F+ YPWGR
Subjt:  LIEGRQRASERRPSHQKTYFEGEKTVSRRQDTVNVKMEHIEMVDDEELFNNYPWGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAGCAAGCGCAAGGCTGCAAGCCGCTGGAGTGACATCGAAAGGAAGGGCTAATGGAGAAAAGACGCCTATAGACTTACACAGTGAAGAAGACACGGATCTGTA
CTTGATGCCAAAGGCAAGAAGGACCCAGCCTCTTAAGATCTTGTTGCATGCCAAACCTGATGTGATCGAGAAAATTCAGACAAATCTGCCAGACGGTTTTGGAGAGGTTC
AAACAAAGTTGTTTTGGAAGCTACATCGACTTTGCTATAACGAACCAGTCTTCCCAGCTGCTGTTGCATCTGATACAAAGCAGTGTAGCCCTAAAAGTGCTACAGAAATA
AATTTCTTAATCGAAGGAAGACAACGAGCAAGTGAAAGGCGACCATCACATCAAAAAACATACTTCGAGGGGGAGAAGACTGTCAGCCGAAGGCAGGATACTGTGAATGT
CAAGATGGAGCACATCGAGATGGTTGACGACGAGGAGCTCTTTAACAATTATCCTTGGGGAAGGTCATCCGACCTAAGTTCCGCAGACAATTGTTTGCCGGAAGATGAAT
GCACGCATACCGAGGATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAGCAAGCGCAAGGCTGCAAGCCGCTGGAGTGACATCGAAAGGAAGGGCTAATGGAGAAAAGACGCCTATAGACTTACACAGTGAAGAAGACACGGATCTGTA
CTTGATGCCAAAGGCAAGAAGGACCCAGCCTCTTAAGATCTTGTTGCATGCCAAACCTGATGTGATCGAGAAAATTCAGACAAATCTGCCAGACGGTTTTGGAGAGGTTC
AAACAAAGTTGTTTTGGAAGCTACATCGACTTTGCTATAACGAACCAGTCTTCCCAGCTGCTGTTGCATCTGATACAAAGCAGTGTAGCCCTAAAAGTGCTACAGAAATA
AATTTCTTAATCGAAGGAAGACAACGAGCAAGTGAAAGGCGACCATCACATCAAAAAACATACTTCGAGGGGGAGAAGACTGTCAGCCGAAGGCAGGATACTGTGAATGT
CAAGATGGAGCACATCGAGATGGTTGACGACGAGGAGCTCTTTAACAATTATCCTTGGGGAAGGTCATCCGACCTAAGTTCCGCAGACAATTGTTTGCCGGAAGATGAAT
GCACGCATACCGAGGATAATTAG
Protein sequenceShow/hide protein sequence
MVRASARLQAAGVTSKGRANGEKTPIDLHSEEDTDLYLMPKARRTQPLKILLHAKPDVIEKIQTNLPDGFGEVQTKLFWKLHRLCYNEPVFPAAVASDTKQCSPKSATEI
NFLIEGRQRASERRPSHQKTYFEGEKTVSRRQDTVNVKMEHIEMVDDEELFNNYPWGRSSDLSSADNCLPEDECTHTEDN