; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039154 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039154
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr2:37511361..37512797
RNA-Seq ExpressionLag0039154
SyntenyLag0039154
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64589.1 hypothetical protein VITISV_008453 [Vitis vinifera]9.7e-1478.72Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        +LWMKRFI ELGFKQQRYV++CNNQ+AIHL KNSTFH+R+KHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
KAA0041611.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.0e-1587.23Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMKRFIQELGFKQQRYVI+CNNQ+AIHLGKN+TFHS+TKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
KAA0047571.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.8e-1585.11Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMK FIQELGFKQQRYVI+C+NQ+AIHLGKN+TFHSRTKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
RVW44682.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.2e-1376.6Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        +LWMKRFI ELGFKQQRYV++CNNQ+AIHL KNSTFH+++KHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
TYK14965.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.8e-1585.11Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMK FIQELGFKQQRYVI+C+NQ+AIHLGKN+TFHSRTKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
TrEMBL top hitse value%identityAlignment
A0A438EAJ7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-1376.6Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        +LWMKRFI ELGFKQQRYV++CNNQ+AIHL KNSTFH+++KHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
A0A5A7TIZ8 Retrovirus-related Pol polyprotein from transposon TNT 1-945.0e-1687.23Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMKRFIQELGFKQQRYVI+CNNQ+AIHLGKN+TFHS+TKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
A0A5A7U1W5 Retrovirus-related Pol polyprotein from transposon TNT 1-944.2e-1585.11Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMK FIQELGFKQQRYVI+C+NQ+AIHLGKN+TFHSRTKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
A0A5D3CTW0 Retrovirus-related Pol polyprotein from transposon TNT 1-944.2e-1585.11Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        MLWMK FIQELGFKQQRYVI+C+NQ+AIHLGKN+TFHSRTKHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
A5AIP8 Uncharacterized protein4.7e-1478.72Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
        +LWMKRFI ELGFKQQRYV++CNNQ+AIHL KNSTFH+R+KHIDV +
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSH
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1156.14Show/hide
Query:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVS-HMIYLLDDGE
        M+W+KRF+QELG  Q+ YV++C++Q+AI L KNS +H+RTKHIDV  H I  + D E
Subjt:  MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVS-HMIYLLDDGE
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.0e-0542.22Show/hide
Query:  MLWMKRFIQELGFKQQR-YVIFCNNQNAIHLGKNSTFHSRTKHID
        M+W+ +F +EL     +  ++FC+N  AIH+  N+ FH RTKHI+
Subjt:  MLWMKRFIQELGFKQQR-YVIFCNNQNAIHLGKNSTFHSRTKHID

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGGATGAAGCGGTTTATACAGGAGCTTGGCTTCAAGCAACAACGGTATGTGATATTCTGCAATAACCAGAATGCTATTCATCTTGGTAAGAACTCTACATTTCA
TTCAAGAACTAAACATATAGATGTGAGCCACATGATCTACTTGCTTGACGATGGTGAGGAGCAGCGAGGATCGATGGCAGAGTTGGAGGAGCTGAAGGCGAGTTGCGACG
ACGGCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGGATGAAGCGGTTTATACAGGAGCTTGGCTTCAAGCAACAACGGTATGTGATATTCTGCAATAACCAGAATGCTATTCATCTTGGTAAGAACTCTACATTTCA
TTCAAGAACTAAACATATAGATGTGAGCCACATGATCTACTTGCTTGACGATGGTGAGGAGCAGCGAGGATCGATGGCAGAGTTGGAGGAGCTGAAGGCGAGTTGCGACG
ACGGCGGCTGA
Protein sequenceShow/hide protein sequence
MLWMKRFIQELGFKQQRYVIFCNNQNAIHLGKNSTFHSRTKHIDVSHMIYLLDDGEEQRGSMAELEELKASCDDGG