; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039158 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039158
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr2:37563302..37563742
RNA-Seq ExpressionLag0039158
SyntenyLag0039158
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]4.3e-1836.8Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++    P T        ++E+LK +WE   PE +  F   YG + +LLY   + + L A  HFW+P+ K F FN+ D++PT+EEYQ L+ +PV    KL
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLTGKRAMAKIAGNLTTTEI
        Y Y ++LT +R+++K  G++  +E+
Subjt:  YFYDKRLTGKRAMAKIAGNLTTTEI

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.3e-1936.5Show/hide
Query:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE
        E  Q K  +   K++    P T        ++E+LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K F FN+ D++PT+EEYQ 
Subjt:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE

Query:  LLRMPVMFKAKLYFYDKRLTGKRAMAKIAGNLTTTEI
        L+ +PV     LY YD++LT +R+++K  G++  +E+
Subjt:  LLRMPVMFKAKLYFYDKRLTGKRAMAKIAGNLTTTEI

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]3.5e-2038.4Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++    P T        ++E+LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K+F FN+ D++PT+EEYQ L+ +PV    KL
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLTGKRAMAKIAGNLTTTEI
        Y YD++LT +R+++K  G++  +E+
Subjt:  YFYDKRLTGKRAMAKIAGNLTTTEI

TYK02649.1 hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]3.1e-1636Show/hide
Query:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE
        E  Q +     LK++    P T        ++E+LK +WE    EH+  FT  YG + ++LY     + L A  +FW+P+ K F FN+ D++PT+EEYQ 
Subjt:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE

Query:  LLRMPVMFKAKLYFYDKRLTGKRAM
        L+ +PV  + K Y YD++LT +R++
Subjt:  LLRMPVMFKAKLYFYDKRLTGKRAM

TYK28912.1 hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]3.1e-1639.81Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++  Q P T        ++++LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K F+FN+ D++PT+EEYQ L+ +PV    K 
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLT
        Y YD++LT
Subjt:  YFYDKRLT

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase2.1e-1836.8Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++    P T        ++E+LK +WE   PE +  F   YG + +LLY   + + L A  HFW+P+ K F FN+ D++PT+EEYQ L+ +PV    KL
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLTGKRAMAKIAGNLTTTEI
        Y Y ++LT +R+++K  G++  +E+
Subjt:  YFYDKRLTGKRAMAKIAGNLTTTEI

A0A5A7TXA1 Glial fibrillary acidic protein-like1.1e-1936.5Show/hide
Query:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE
        E  Q K  +   K++    P T        ++E+LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K F FN+ D++PT+EEYQ 
Subjt:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE

Query:  LLRMPVMFKAKLYFYDKRLTGKRAMAKIAGNLTTTEI
        L+ +PV     LY YD++LT +R+++K  G++  +E+
Subjt:  LLRMPVMFKAKLYFYDKRLTGKRAMAKIAGNLTTTEI

A0A5A7VHI3 Uncharacterized protein1.7e-2038.4Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++    P T        ++E+LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K+F FN+ D++PT+EEYQ L+ +PV    KL
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLTGKRAMAKIAGNLTTTEI
        Y YD++LT +R+++K  G++  +E+
Subjt:  YFYDKRLTGKRAMAKIAGNLTTTEI

A0A5D3BWX8 Uncharacterized protein1.5e-1636Show/hide
Query:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE
        E  Q +     LK++    P T        ++E+LK +WE    EH+  FT  YG + ++LY     + L A  +FW+P+ K F FN+ D++PT+EEYQ 
Subjt:  EKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQE

Query:  LLRMPVMFKAKLYFYDKRLTGKRAM
        L+ +PV  + K Y YD++LT +R++
Subjt:  LLRMPVMFKAKLYFYDKRLTGKRAM

A0A5D3DZ69 Uncharacterized protein1.5e-1639.81Show/hide
Query:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL
        K++  Q P T        ++++LK +WE   PE +  FT  YG + +LLY   + + L A  HFW+P+ K F+FN+ D++PT+EEYQ L+ +PV    K 
Subjt:  KEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQELLRMPVMFKAKL

Query:  YFYDKRLT
        Y YD++LT
Subjt:  YFYDKRLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAACTCATTGGTTACCATTGAGAAGGTACAAGCCAAATTTGAAACAAAGCTACTAAAAGAGATCTCAAATCAACCTCCAACGACGGACATCTTCAATCATTC
CACCCGAAGCATCGAAAAGCTAAAGGAAGTATGGGAAGAATTTTCACCAGAGCATAAATTTGCATTCACAAACAAATACGGATATGTGGCCAATCTCTTGTACATTCAAT
TTGATGCAAATGCTTTAGCAGCCACTCTACACTTTTGGAATCCTATCTGTAAGTTTTTCTTATTTAACTCTCATGATGTATCACCAACTGTGGAGGAGTATCAGGAACTA
CTTCGAATGCCAGTAATGTTCAAAGCGAAGCTGTATTTCTATGACAAGAGACTGACGGGTAAGAGGGCTATGGCAAAAATTGCTGGTAACTTGACTACCACCGAGATATA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAACTCATTGGTTACCATTGAGAAGGTACAAGCCAAATTTGAAACAAAGCTACTAAAAGAGATCTCAAATCAACCTCCAACGACGGACATCTTCAATCATTC
CACCCGAAGCATCGAAAAGCTAAAGGAAGTATGGGAAGAATTTTCACCAGAGCATAAATTTGCATTCACAAACAAATACGGATATGTGGCCAATCTCTTGTACATTCAAT
TTGATGCAAATGCTTTAGCAGCCACTCTACACTTTTGGAATCCTATCTGTAAGTTTTTCTTATTTAACTCTCATGATGTATCACCAACTGTGGAGGAGTATCAGGAACTA
CTTCGAATGCCAGTAATGTTCAAAGCGAAGCTGTATTTCTATGACAAGAGACTGACGGGTAAGAGGGCTATGGCAAAAATTGCTGGTAACTTGACTACCACCGAGATATA
A
Protein sequenceShow/hide protein sequence
MEGNSLVTIEKVQAKFETKLLKEISNQPPTTDIFNHSTRSIEKLKEVWEEFSPEHKFAFTNKYGYVANLLYIQFDANALAATLHFWNPICKFFLFNSHDVSPTVEEYQEL
LRMPVMFKAKLYFYDKRLTGKRAMAKIAGNLTTTEI