; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039161 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039161
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr2:37631419..37633912
RNA-Seq ExpressionLag0039161
SyntenyLag0039161
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833165.1 aspartyl protease family protein [Synechococcus sp. PCC 7002]9.6e-4248.37Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILWMNAIKAALKAEEEDR-----DACK
        +LD EA D DVPIILGRPFL+TG+TLIDV KG++ MRVNDQ+V+FNV  AL+YP    + ET   L+                +  EE D      DA +
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILWMNAIKAALKAEEEDR-----DACK

Query:  AEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYCMHK
         E+C     +T E    +  N   T PS+   P +ELK LP HLKY +LG+G SLPVIIS+ L   QE  L+ +LK+H   +GW+LADIKGI+P+YCMHK
Subjt:  AEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYCMHK

Query:  IRLVDEADKFVECQR
        IRL +  D  +E QR
Subjt:  IRLVDEADKFVECQR

XP_017227899.1 PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus]3.5e-4449.78Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVA--------RLEICS---PMEILWMNAIKAALKAEEE
        +LD EA DR+VPIILGRPFLATG+TLIDVQ G+LTMRV D+KV FNV  A+KY  + +D   +         +L+  S   P+E L +N     +  EE+
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVA--------RLEICS---PMEILWMNAIKAALKAEEE

Query:  DRDACKA--EECRIFAETTAEIHALDLSNMEFTLP--SIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK
        D     A  E       T+    +LDLS+ EF  P  SI  PP LELK LP+HLKY +LG   +LPVIIS++L + +E+ L++LLK H+  IGWS+ADIK
Subjt:  DRDACKA--EECRIFAETTAEIHALDLSNMEFTLP--SIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK

Query:  GINPSYCMHKIRLVDEADKFVECQR
        GI+PS CMHKI L D A   +E QR
Subjt:  GINPSYCMHKIRLVDEADKFVECQR

XP_017233064.1 PREDICTED: uncharacterized protein LOC108207111 [Daucus carota subsp. sativus]9.3e-4551.11Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVA--------RLEICS---PMEILWMNAIKAALKAEEE
        +LD EA DR+VPIILGRPFLATG+TLIDVQ G+LTMRV D+KV FNV  A+KY  + +D   +         +LE  S   P+E L +N     +  EE+
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVA--------RLEICS---PMEILWMNAIKAALKAEEE

Query:  DRDACKA--EECRIFAETTAEIHALDLSNMEFTLP--SIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK
        D     A  E       T     +LDLS+ EF  P  SI  PP LELK LP+HLKY +LG   +LPVIIS++L + QE+ L++LLK HK  IGWS+ADIK
Subjt:  DRDACKA--EECRIFAETTAEIHALDLSNMEFTLP--SIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK

Query:  GINPSYCMHKIRLVDEADKFVECQR
        GI+PS CMHKI L D A   +E QR
Subjt:  GINPSYCMHKIRLVDEADKFVECQR

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]2.5e-4246.67Show/hide
Query:  SLLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPM------EILWMN-AIKAALK-----AE
        ++LD EA DR+VPIILGRPFLATG+TLIDVQ G+LTMRVNDQKV FNV NA+++   P + E  +RL +   +      + +W +  + ++L+     +E
Subjt:  SLLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPM------EILWMN-AIKAALK-----AE

Query:  EEDRDACKAEECRIFAETTAEIHALDL--SNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK
        +E+      E  + F +      +L+L  SN +   PSI  PP LELKPLP+HLKY +LG+ ++LPVIIS+ L+   E LL+++LK+HK  IGW++ADIK
Subjt:  EEDRDACKAEECRIFAETTAEIHALDL--SNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIK

Query:  GINPSYCMHKIRLVDEADKFVECQR
         I+P+ CMHKI L       +E QR
Subjt:  GINPSYCMHKIRLVDEADKFVECQR

XP_030506603.1 uncharacterized protein LOC115721515 [Cannabis sativa]1.7e-4350.47Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILWMNAIKAALKAEEEDRDACKAEECR
        +LD EA DR+VPIILGRPFLATG+TLIDVQKG+LTMRVNDQ+V FNV NA+++P           +E CS +                E+      E  +
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILWMNAIKAALKAEEEDRDACKAEECR

Query:  IFAETTAEIHALDLSNMEF--TLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYCMHKIRL
         F +      +L+LS   F    PSI  PP LELKPLP+HLKY +LGDG++LPVIIS+ L   +E LL+ +LK++K  IGW++ADIKGI+PS CMHKI L
Subjt:  IFAETTAEIHALDLSNMEF--TLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYCMHKIRL

Query:  VDEADKFVECQR
         D  +  VE QR
Subjt:  VDEADKFVECQR

TrEMBL top hitse value%identityAlignment
A0A2G9H400 Reverse transcriptase8.8e-4144.04Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD
        +LD++  D +VPIILGRPFLATG+TLIDVQKG+LTMRV DQ++ FNV  A+K+P    +  +V+  +  +        P++ L    +    +  EED +
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD

Query:  ACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYC
          +  +   F ++         +  +   PSI  PP LELKPLP+HL Y +LG+  +LPVIISS L  +Q + L+++++ HKC IGW++ADIKGI+PS+C
Subjt:  ACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYC

Query:  MHKIRLVDEADKFVECQR
        MHKI L D+    VE QR
Subjt:  MHKIRLVDEADKFVECQR

A0A2G9HWF8 Reverse transcriptase3.0e-4144.95Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILW---MNAIKAAL-----KAEEEDRD
        +LD+E  D +VPIILGRPFLATG+TLIDVQKG+LTMRV DQ++ FNV  A+K+P    +  +V+  +  +  + +    ++ ++ AL     +  EEDR+
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICSPMEILW---MNAIKAAL-----KAEEEDRD

Query:  ACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYC
          K  +   + ++         +  +   PSI  PP LELKPLP+HL Y +LG+  +LPVIISS L  +Q + L+++L+ HK  IGW++ADIKGI+PS+C
Subjt:  ACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSYC

Query:  MHKIRLVDEADKFVECQR
        MHKI L D+    VE QR
Subjt:  MHKIRLVDEADKFVECQR

A0A2G9HYA0 Reverse transcriptase1.4e-4145.66Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD
        +LD+E  D +VPIILGRPFLATG+TLIDVQKG+LTMRV DQ++ FNV  A+K+P    +   V+  +  +        P++ L    +    +  EED +
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD

Query:  ACKAEECRIFAETTAEIHALDLSNMEFTL-PSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSY
          K  +   F + +  + +L+ +     L PSI  PP LELKPLP+HL Y +LG+  +LPVIISS L  +Q + L+++L+ HK  IGW++ADIKGI+PS+
Subjt:  ACKAEECRIFAETTAEIHALDLSNMEFTL-PSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSY

Query:  CMHKIRLVDEADKFVECQR
        CMHKI L D+    VE QR
Subjt:  CMHKIRLVDEADKFVECQR

A0A2G9HYD8 Reverse transcriptase1.8e-4145.66Show/hide
Query:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD
        +LD+E  D +VPIILGRPFLATG+TLIDVQKG+LTMRV DQ++ FNV  A+K+P    +  +V+  +  +        P++ L    +    +  EED +
Subjt:  LLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEICS--------PMEILWMNAIKAALKAEEEDRD

Query:  ACKAEECRIFAETTAEIHALDLSNMEFTL-PSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSY
          K      F ++   + +L+ +     L PSI  PP LELKPLP HL Y +LG+  +LPVIISS L  +Q + L+++L+ HK  IGW++ADIKGI+PS+
Subjt:  ACKAEECRIFAETTAEIHALDLSNMEFTL-PSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKGINPSY

Query:  CMHKIRLVDEADKFVECQR
        CMHKI L D+    VE QR
Subjt:  CMHKIRLVDEADKFVECQR

A0A2G9I9I8 DNA-directed DNA polymerase7.9e-4244.2Show/hide
Query:  KSLLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYP------------ANPKDSETVARLEICSPMEILWMNAIKAALKA
        ++L D+ A+D ++PIILGRPFLATG+TLIDVQKG+LTMRV DQ++ FNV  A+K+P             N   +E++A+  +  P+E   ++ I    + 
Subjt:  KSLLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYP------------ANPKDSETVARLEICSPMEILWMNAIKAALKA

Query:  EEEDRDACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKG
         E+D +  K  +   F +         + ++E T PS  +PP LELKPLP HL+Y +LG+  +LPVIISS L  +Q   L+++L+ HKC IGW++ DIKG
Subjt:  EEEDRDACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIGWSLADIKG

Query:  INPSYCMHKIRLVDEADKFVECQR
        I+PS+C+HKI L D+    VE QR
Subjt:  INPSYCMHKIRLVDEADKFVECQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGCTAGCCTTCAAGTTTGTTTTGGGAGCCTTTTCGAGTTCTTTAGGAGCAATCTTGGGTAATATAAAGTATTGTGGATATTCGATCCTCGAGTATAAATGGTC
GAGGGTTGGTAAATCATTATTGGATGTCGAGGCTTCAGACAGGGACGTTCCAATTATTTTGGGAAGGCCATTTTTGGCAACTGGACAAACGCTGATCGATGTGCAAAAAG
GAGATCTCACCATGCGAGTTAACGACCAAAAAGTGGTATTCAATGTGCTCAACGCATTAAAATACCCAGCTAATCCAAAGGACAGTGAGACTGTAGCACGTTTAGAGATC
TGCTCGCCAATGGAGATACTCTGGATGAATGCGATAAAAGCGGCGCTTAAGGCTGAAGAAGAAGACCGAGACGCATGTAAAGCAGAGGAATGTCGCATTTTTGCTGAAAC
CACCGCAGAGATTCATGCGTTGGATCTCTCAAACATGGAGTTCACTTTACCTTCCATCGTATCTCCACCTGCGTTAGAACTAAAACCCCTCCCAACGCATCTTAAATACA
AATTTTTAGGCGATGGAAAATCCTTGCCAGTTATTATTTCATCTAAGCTAGATTTAATGCAAGAAAAGTTGTTGATGCAGCTTTTAAAAAGGCATAAATGTACCATAGGA
TGGAGTCTTGCTGACATCAAGGGAATAAACCCCTCCTATTGCATGCATAAAATCAGACTGGTGGATGAAGCTGACAAGTTTGTAGAGTGTCAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGCTAGCCTTCAAGTTTGTTTTGGGAGCCTTTTCGAGTTCTTTAGGAGCAATCTTGGGTAATATAAAGTATTGTGGATATTCGATCCTCGAGTATAAATGGTC
GAGGGTTGGTAAATCATTATTGGATGTCGAGGCTTCAGACAGGGACGTTCCAATTATTTTGGGAAGGCCATTTTTGGCAACTGGACAAACGCTGATCGATGTGCAAAAAG
GAGATCTCACCATGCGAGTTAACGACCAAAAAGTGGTATTCAATGTGCTCAACGCATTAAAATACCCAGCTAATCCAAAGGACAGTGAGACTGTAGCACGTTTAGAGATC
TGCTCGCCAATGGAGATACTCTGGATGAATGCGATAAAAGCGGCGCTTAAGGCTGAAGAAGAAGACCGAGACGCATGTAAAGCAGAGGAATGTCGCATTTTTGCTGAAAC
CACCGCAGAGATTCATGCGTTGGATCTCTCAAACATGGAGTTCACTTTACCTTCCATCGTATCTCCACCTGCGTTAGAACTAAAACCCCTCCCAACGCATCTTAAATACA
AATTTTTAGGCGATGGAAAATCCTTGCCAGTTATTATTTCATCTAAGCTAGATTTAATGCAAGAAAAGTTGTTGATGCAGCTTTTAAAAAGGCATAAATGTACCATAGGA
TGGAGTCTTGCTGACATCAAGGGAATAAACCCCTCCTATTGCATGCATAAAATCAGACTGGTGGATGAAGCTGACAAGTTTGTAGAGTGTCAGAGATGA
Protein sequenceShow/hide protein sequence
MCELAFKFVLGAFSSSLGAILGNIKYCGYSILEYKWSRVGKSLLDVEASDRDVPIILGRPFLATGQTLIDVQKGDLTMRVNDQKVVFNVLNALKYPANPKDSETVARLEI
CSPMEILWMNAIKAALKAEEEDRDACKAEECRIFAETTAEIHALDLSNMEFTLPSIVSPPALELKPLPTHLKYKFLGDGKSLPVIISSKLDLMQEKLLMQLLKRHKCTIG
WSLADIKGINPSYCMHKIRLVDEADKFVECQR