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Lag0039213 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039213
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranscription factor MYB34
Genome locationchr2:39011554..39016523
RNA-Seq ExpressionLag0039213
SyntenyLag0039213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]1.5e-0766.67Show/hide
Query:  QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP
        Q+ NPI++A+DR RAIR Y  PMF+ELNPGI RP+IQA  FE+KP
Subjt:  QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP

KAA3453226.1 transcription factor MYB34 [Gossypium australe]5.6e-1030.58Show/hide
Query:  EQQNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMK-------------------------------PSSAAT--------------
        E+      N I+VA++R RAIR Y  P+F ELNPGI RP+I+A  FE+K                               P+  AT              
Subjt:  EQQNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMK-------------------------------PSSAAT--------------

Query:  SCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFV-NQSGFSKAQELPQQN----KQALPQYNSGSSLEAMMKEFMARTDATIQKLE--TGQGAGD-
        +  A    +Q    ACVYCG+ H F+ CPSN  S+++V N+      +E+   +    K ++    S +SLE ++K +M + D  ++ LE   GQ A + 
Subjt:  SCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFV-NQSGFSKAQELPQQN----KQALPQYNSGSSLEAMMKEFMARTDATIQKLE--TGQGAGD-

Query:  SNKDAG
        SN+  G
Subjt:  SNKDAG

KAG8491357.1 hypothetical protein CXB51_014478 [Gossypium anomalum]1.5e-0763.04Show/hide
Query:  NQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP
        N V+NPIL+A+DR RA+R Y  P+FD+LNPGI RP+I+A  FE+KP
Subjt:  NQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP

KAG8501049.1 hypothetical protein CXB51_003148 [Gossypium anomalum]9.0e-0829.69Show/hide
Query:  NQVTEEACVYCGEDHNFEFCPSNPASVFFVNQSGFS-----KAQELP--QQNKQALPQYNSGSSLEAMMKEFMARTDATIQKLETGQGAGDSNKDAGASG
        NQ    ACVYCGE H FE CPSNP S++++   G +     +  +LP   Q  Q   Q  S +SLE ++K +MA+ DAT++ LE   G   +       G
Subjt:  NQVTEEACVYCGEDHNFEFCPSNPASVFFVNQSGFS-----KAQELP--QQNKQALPQYNSGSSLEAMMKEFMARTDATIQKLETGQGAGDSNKDAGASG

Query:  SVP-DVEPPYVPPPLMCRLYLFHKGKGLRIKRILENTVVETTIKDSTSKHLEDHGEAPPIKSSVIE--------APTLDLKPLPDHLKYKGSLGRNTEEI
        ++P D +    P    C      K   LR +  +E  ++E     +  +H+E      P     +E         PT   KP P    Y   L +  +E+
Subjt:  SVP-DVEPPYVPPPLMCRLYLFHKGKGLRIKRILENTVVETTIKDSTSKHLEDHGEAPPIKSSVIE--------APTLDLKPLPDHLKYKGSLGRNTEEI

Query:  QEKRAEEVQEQRLEVVLEGGNEPVQEARVEVIMPEVPKRRR----IKRKVGRVQVV
        Q K+  +V +Q L +     N P+ EA  +  MP   K  +     KRK+G  + V
Subjt:  QEKRAEEVQEQRLEVVLEGGNEPVQEARVEVIMPEVPKRRR----IKRKVGRVQVV

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]1.9e-1036.11Show/hide
Query:  QVTEEACVYCGEDHNFEFCPSNPASVFFVNQS---------------GFSKAQELPQQNKQALPQYNSGSSLEAMMKEFMARTDATIQ---------KLE
        Q  E +CVYCG+ H FE CPSNPASV +V  S               GFS+ Q  PQQ  Q  PQ +  SSLE++M+++MA+ DA IQ         +++
Subjt:  QVTEEACVYCGEDHNFEFCPSNPASVFFVNQS---------------GFSKAQELPQQNKQALPQYNSGSSLEAMMKEFMARTDATIQ---------KLE

Query:  TGQGAGD-SNKDAGASGSVPDVEPPYVPPPLMCRLYLFHKGKGLRIKRILENTVVETTIKDSTSKHLEDHGEAPPIKSSV
         GQ A D  N+  G   S  D E P       C+      GK      I+E+ V  T  K+S+S   E   +  P  S+V
Subjt:  TGQGAGD-SNKDAGASGSVPDVEPPYVPPPLMCRLYLFHKGKGLRIKRILENTVVETTIKDSTSKHLEDHGEAPPIKSSV

TrEMBL top hitse value%identityAlignment
A0A5B6U8V7 Transcription factor MYB342.7e-1030.58Show/hide
Query:  EQQNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMK-------------------------------PSSAAT--------------
        E+      N I+VA++R RAIR Y  P+F ELNPGI RP+I+A  FE+K                               P+  AT              
Subjt:  EQQNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMK-------------------------------PSSAAT--------------

Query:  SCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFV-NQSGFSKAQELPQQN----KQALPQYNSGSSLEAMMKEFMARTDATIQKLE--TGQGAGD-
        +  A    +Q    ACVYCG+ H F+ CPSN  S+++V N+      +E+   +    K ++    S +SLE ++K +M + D  ++ LE   GQ A + 
Subjt:  SCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFV-NQSGFSKAQELPQQN----KQALPQYNSGSSLEAMMKEFMARTDATIQKLE--TGQGAGD-

Query:  SNKDAG
        SN+  G
Subjt:  SNKDAG

A0A5B6VWL2 Transcription factor MYB341.1e-0658.18Show/hide
Query:  QNEQQNN---QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP
        QN+ Q N    V NPIL+A+DR RAIR Y  P F+ELN GI RP+I+A+ FE+KP
Subjt:  QNEQQNN---QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP

A0A6J1EQ90 uncharacterized protein LOC1114364114.1e-0628.57Show/hide
Query:  VNQVTEEACVYCGEDHNFEFCPSNPASVFFV-----------------------------------------------------NQSGFSKAQELPQQNK
        +NQ   E+CVYCGE+H F+ CPSNPAS+F+V                                                     NQ  +S  Q   Q   
Subjt:  VNQVTEEACVYCGEDHNFEFCPSNPASVFFV-----------------------------------------------------NQSGFSKAQELPQQNK

Query:  QALPQYNSGSSLEAMMKEFMARTDATIQKLETG------QGAGDSNKDAGASGS
            QY S +S+E+++KE+MA+ DA IQ  +        Q  G+ N + G S S
Subjt:  QALPQYNSGSSLEAMMKEFMARTDATIQKLETG------QGAGDSNKDAGASGS

A0A6J1EQ90 uncharacterized protein LOC1114364113.8e-0456.25Show/hide
Query:  QNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP
        Q     NPI +A+DR RAIRAY  P  +ELNP I RP+IQ   FE+KP
Subjt:  QNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP

A0A6P4MQY3 uncharacterized protein LOC1084621751.3e-0736.43Show/hide
Query:  NQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP---SSAATSCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFVNQSGFSKA
        N V NPIL+ +DR RAIR Y  P+F+ELNPGI  P I+A  FE+K        T     +L  +V E   V      + +    N  +    ++   S++
Subjt:  NQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP---SSAATSCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFVNQSGFSKA

Query:  QELPQQNKQALPQYNSGSSLEAMMKEFMARTDATIQKLET
        Q   QQ  +A PQ  S +SLE ++K +MA+ D  IQ   T
Subjt:  QELPQQNKQALPQYNSGSSLEAMMKEFMARTDATIQKLET

U5CUI2 Retrotrans_gag domain-containing protein7.4e-0866.67Show/hide
Query:  QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP
        Q+ NPI++A+DR RAIR Y  PMF+ELNPGI RP+IQA  FE+KP
Subjt:  QVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCGCCAGCAAAATCCACCGCTGGACAAAATGAGCAGCAGAATAATCAGGTTGAGAATCCTATCTTGGTAGCGAACGATAGGACCAGAGCCATTCGAGCATA
TGATTTTCCAATGTTTGATGAGTTAAATCCAGGGATTGCACGTCCTCAAATTCAAGCAGCAAATTTTGAAATGAAACCGTCATCAGCAGCCACCAGCTGTGGAGCCTGCT
CATTGGTGAACCAAGTCACAGAGGAAGCATGTGTCTATTGTGGTGAAGATCACAACTTCGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGTGAACCAGTCGGGA
TTTTCGAAAGCGCAGGAATTGCCCCAGCAAAATAAGCAGGCTTTGCCCCAATACAATTCAGGGAGTTCTCTTGAGGCAATGATGAAAGAATTTATGGCTCGTACAGATGC
CACAATTCAAAAGTTGGAGACTGGTCAGGGTGCTGGAGATAGCAATAAAGATGCTGGAGCATCTGGTTCTGTTCCGGATGTGGAACCACCTTATGTGCCGCCCCCACTTA
TGTGCCGCCTCTACCTTTTCCACAAAGGAAAAGGCCTAAGAATCAAACGGATTCTGGAGAACACAGTTGTTGAGACAACAATTAAGGATTCGACTAGCAAGCATTTGGAA
GATCATGGAGAGGCTCCTCCTATTAAGTCATCTGTGATTGAGGCACCTACTTTAGATTTGAAGCCCTTGCCGGATCATCTAAAATACAAAGGAAGTTTGGGAAGGAATAC
CGAGGAGATTCAAGAGAAGCGGGCTGAAGAGGTGCAAGAACAACGTCTAGAGGTTGTGCTTGAAGGAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTGATCATGC
CGGAGGTACCCAAACGTCGCCGCATTAAGCGAAAAGTCGGCCGTGTTCAGGTTGTCCGAACTGATACCCCCTCGCCTCCAACTACGGATTCTAAGAGGGACAATGCAGAG
AAAGATGAGCGTGAGAAGAAGGAGGCTGAGGAAAGAGTGGTGCGCGAGTTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAGATAGA
CTGGAGTCCTAGTGTTATTAATGCACTGTATAACCTTCAGAATTTCCCCCACATAGCGTATAATGAGATGGCTGTAGCGCCATCTAATGAGCAGCTGAGTGATGCTGTGC
GGGATGTGGAATTGAAGGGACACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAGCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCGCCAGCAAAATCCACCGCTGGACAAAATGAGCAGCAGAATAATCAGGTTGAGAATCCTATCTTGGTAGCGAACGATAGGACCAGAGCCATTCGAGCATA
TGATTTTCCAATGTTTGATGAGTTAAATCCAGGGATTGCACGTCCTCAAATTCAAGCAGCAAATTTTGAAATGAAACCGTCATCAGCAGCCACCAGCTGTGGAGCCTGCT
CATTGGTGAACCAAGTCACAGAGGAAGCATGTGTCTATTGTGGTGAAGATCACAACTTCGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGTGAACCAGTCGGGA
TTTTCGAAAGCGCAGGAATTGCCCCAGCAAAATAAGCAGGCTTTGCCCCAATACAATTCAGGGAGTTCTCTTGAGGCAATGATGAAAGAATTTATGGCTCGTACAGATGC
CACAATTCAAAAGTTGGAGACTGGTCAGGGTGCTGGAGATAGCAATAAAGATGCTGGAGCATCTGGTTCTGTTCCGGATGTGGAACCACCTTATGTGCCGCCCCCACTTA
TGTGCCGCCTCTACCTTTTCCACAAAGGAAAAGGCCTAAGAATCAAACGGATTCTGGAGAACACAGTTGTTGAGACAACAATTAAGGATTCGACTAGCAAGCATTTGGAA
GATCATGGAGAGGCTCCTCCTATTAAGTCATCTGTGATTGAGGCACCTACTTTAGATTTGAAGCCCTTGCCGGATCATCTAAAATACAAAGGAAGTTTGGGAAGGAATAC
CGAGGAGATTCAAGAGAAGCGGGCTGAAGAGGTGCAAGAACAACGTCTAGAGGTTGTGCTTGAAGGAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTGATCATGC
CGGAGGTACCCAAACGTCGCCGCATTAAGCGAAAAGTCGGCCGTGTTCAGGTTGTCCGAACTGATACCCCCTCGCCTCCAACTACGGATTCTAAGAGGGACAATGCAGAG
AAAGATGAGCGTGAGAAGAAGGAGGCTGAGGAAAGAGTGGTGCGCGAGTTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAGATAGA
CTGGAGTCCTAGTGTTATTAATGCACTGTATAACCTTCAGAATTTCCCCCACATAGCGTATAATGAGATGGCTGTAGCGCCATCTAATGAGCAGCTGAGTGATGCTGTGC
GGGATGTGGAATTGAAGGGACACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAGCTTATCTGA
Protein sequenceShow/hide protein sequence
MSDPPAKSTAGQNEQQNNQVENPILVANDRTRAIRAYDFPMFDELNPGIARPQIQAANFEMKPSSAATSCGACSLVNQVTEEACVYCGEDHNFEFCPSNPASVFFVNQSG
FSKAQELPQQNKQALPQYNSGSSLEAMMKEFMARTDATIQKLETGQGAGDSNKDAGASGSVPDVEPPYVPPPLMCRLYLFHKGKGLRIKRILENTVVETTIKDSTSKHLE
DHGEAPPIKSSVIEAPTLDLKPLPDHLKYKGSLGRNTEEIQEKRAEEVQEQRLEVVLEGGNEPVQEARVEVIMPEVPKRRRIKRKVGRVQVVRTDTPSPPTTDSKRDNAE
KDEREKKEAEERVVREFYANIDKEDGFQVIVRGVEIDWSPSVINALYNLQNFPHIAYNEMAVAPSNEQLSDAVRDVELKGHGGSCQRQRKGRFSQLI