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Lag0039230 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039230
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:39518331..39519134
RNA-Seq ExpressionLag0039230
SyntenyLag0039230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.2e-1958.23Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIRC  F FTLTGS R WF++LKR+S S FKELA+AF+
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.9e-1960.98Show/hide
Query:  EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        EE+MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A++C  F  TL+GSAR WF +LKR S S FK LA+AF+
Subjt:  EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.0e-1756.96Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRC  F FTLTGSAR+WF +LKR S S FKELA+AF+
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.9e-2438.43Show/hide
Query:  LVRDPRKGKEPMEHTAESETRSKGKKTNSMTSKVR-GLKPTDRTILRSPESSTLKGRDYTVSTPSYGHTKTDLKNLIVEKRRSAKTAESEAKAAEAEARA
        LVRDP+KGK P E   E       + TNS+ SK+R G     RT +  P  +    + +    P+ G +  D +N             SE  + +     
Subjt:  LVRDPRKGKEPMEHTAESETRSKGKKTNSMTSKVR-GLKPTDRTILRSPESSTLKGRDYTVSTPSYGHTKTDLKNLIVEKRRSAKTAESEAKAAEAEARA

Query:  AEAKARLVEAKAKKDNLPWKTELLNTLKELGNPQGDQQKSKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFH
                  K K  + P  +E  ++ KE G               +LEEL DQ D  FTEE+M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +
Subjt:  AEAKARLVEAKAKKDNLPWKTELLNTLKELGNPQGDQQKSKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFH

Query:  GVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        GVS+A+RC  F  TL GSAR WF +LKR S S FK LA+AF+
Subjt:  GVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]4.3e-2450.37Show/hide
Query:  AKAKKDNLPWKTELLNTLKELGNPQGDQQK--SKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR
        +K   DN   +   LN  K +  P+  +++   K+ G  +LEEL  Q D  FTEE+M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAIR
Subjt:  AKAKKDNLPWKTELLNTLKELGNPQGDQQK--SKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR

Query:  CCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        C  F  TL GSAR WF +LKR S S FK LA+AF+
Subjt:  CCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.5e-1958.23Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        MK +VP KFK+P  K+YDG  DP+ HL+ Y  W D +G+++AIRC  F FTLTGS R WF++LKR+S S FKELA+AF+
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

A0A6J1D7D2 uncharacterized protein LOC1110183079.0e-2060.98Show/hide
Query:  EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        EE+MK +VP KFK+PT KQ+DG  D V HL+AYR WMD +GVS+A++C  F  TL+GSAR WF +LKR S S FK LA+AF+
Subjt:  EEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

A0A6J1DWY0 uncharacterized protein LOC1110252939.3e-2538.43Show/hide
Query:  LVRDPRKGKEPMEHTAESETRSKGKKTNSMTSKVR-GLKPTDRTILRSPESSTLKGRDYTVSTPSYGHTKTDLKNLIVEKRRSAKTAESEAKAAEAEARA
        LVRDP+KGK P E   E       + TNS+ SK+R G     RT +  P  +    + +    P+ G +  D +N             SE  + +     
Subjt:  LVRDPRKGKEPMEHTAESETRSKGKKTNSMTSKVR-GLKPTDRTILRSPESSTLKGRDYTVSTPSYGHTKTDLKNLIVEKRRSAKTAESEAKAAEAEARA

Query:  AEAKARLVEAKAKKDNLPWKTELLNTLKELGNPQGDQQKSKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFH
                  K K  + P  +E  ++ KE G               +LEEL DQ D  FTEE+M+ +VP KFK+PT KQ+D   DPV HL+AYR WMD +
Subjt:  AEAKARLVEAKAKKDNLPWKTELLNTLKELGNPQGDQQKSKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFH

Query:  GVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        GVS+A+RC  F  TL GSAR WF +LKR S S FK LA+AF+
Subjt:  GVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

A0A6J1DZ49 uncharacterized protein LOC1110248515.0e-1856.96Show/hide
Query:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        MK +   KFK+P   +YDG  DP+ HL+AYR W D + + +AIRC  F FTLTGSAR+WF +LKR S S FKELA+AF+
Subjt:  MKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

A0A6J1E1E7 uncharacterized protein LOC1110255482.1e-2450.37Show/hide
Query:  AKAKKDNLPWKTELLNTLKELGNPQGDQQK--SKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR
        +K   DN   +   LN  K +  P+  +++   K+ G  +LEEL  Q D  FTEE+M+ +VP KFK+PT K +DG  +PV HL+AYR WMD +GVSDAIR
Subjt:  AKAKKDNLPWKTELLNTLKELGNPQGDQQK--SKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSWMDFHGVSDAIR

Query:  CCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL
        C  F  TL GSAR WF +LKR S S FK LA+AF+
Subjt:  CCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCATAATTTGTCTAGGATACTACGTATCTTGGACAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCTAT
GGAGCACACTGCAGAGTCAGAGACGAGGTCAAAGGGAAAGAAGACTAACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGCACGATTTTGAGAAGCCCAG
AGTCAAGCACACTTAAGGGGCGTGACTACACAGTTTCTACCCCAAGCTACGGACATACTAAGACAGACCTGAAGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAAAACT
GCCGAGTCCGAGGCCAAAGCCGCCGAAGCTGAAGCCCGGGCTGCCGAGGCCAAGGCTAGGTTGGTCGAGGCCAAGGCCAAGAAAGACAACCTCCCTTGGAAGACCGAGCT
TCTAAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCAGCAAAAGTCAAAGGACCTTGGAGATCAAAACTTGGAAGAACTAGCTGACCAAGTTGATCCGTCCTTCA
CAGAAGAAGTCATGAAAGCCGAGGTGCCTCAAAAGTTTAAGGTACCCACGTTCAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGG
ATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCTGCACATTCTTTTTCACTCTGACAGGATCAGCTAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCATCCAGCTG
TTTCAAAGAGTTGGCCCAAGCATTCCTTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCATAATTTGTCTAGGATACTACGTATCTTGGACAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCTAT
GGAGCACACTGCAGAGTCAGAGACGAGGTCAAAGGGAAAGAAGACTAACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGCACGATTTTGAGAAGCCCAG
AGTCAAGCACACTTAAGGGGCGTGACTACACAGTTTCTACCCCAAGCTACGGACATACTAAGACAGACCTGAAGAATCTGATCGTTGAGAAGCGCAGAAGTGCCAAAACT
GCCGAGTCCGAGGCCAAAGCCGCCGAAGCTGAAGCCCGGGCTGCCGAGGCCAAGGCTAGGTTGGTCGAGGCCAAGGCCAAGAAAGACAACCTCCCTTGGAAGACCGAGCT
TCTAAACACACTAAAGGAGCTCGGAAATCCTCAGGGAGACCAGCAAAAGTCAAAGGACCTTGGAGATCAAAACTTGGAAGAACTAGCTGACCAAGTTGATCCGTCCTTCA
CAGAAGAAGTCATGAAAGCCGAGGTGCCTCAAAAGTTTAAGGTACCCACGTTCAAACAGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGG
ATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCTGCACATTCTTTTTCACTCTGACAGGATCAGCTAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCATCCAGCTG
TTTCAAAGAGTTGGCCCAAGCATTCCTTGCATAG
Protein sequenceShow/hide protein sequence
MGHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTNSMTSKVRGLKPTDRTILRSPESSTLKGRDYTVSTPSYGHTKTDLKNLIVEKRRSAKT
AESEAKAAEAEARAAEAKARLVEAKAKKDNLPWKTELLNTLKELGNPQGDQQKSKDLGDQNLEELADQVDPSFTEEVMKAEVPQKFKVPTFKQYDGKKDPVQHLNAYRSW
MDFHGVSDAIRCCTFFFTLTGSARHWFERLKRRSSSCFKELAQAFLA