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Lag0039250 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039250
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr2:39853127..39853699
RNA-Seq ExpressionLag0039250
SyntenyLag0039250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.6e-0732.61Show/hide
Query:  LLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQH
        +LYC++KG  INVG +I  EI  C  +  GKLFF  LIT  C+   + +  DE+                    + RK   S     P   P   +PS  
Subjt:  LLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQH

Query:  TPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERD
        T  T   P  E L        Q+ E L+T+W Y  ERD
Subjt:  TPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERD

MCI09484.1 hypothetical protein [Trifolium medium]1.4e-0532.12Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRA--GKLFFGSLITRLCQRVKI-VLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVAS
        +LL+C+I G  INVG II  EI+ C  K++  G L+F  LIT LC++  + V G+DE    F+PT          Q +I+   K +T +           
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRA--GKLFFGSLITRLCQRVKI-VLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVAS

Query:  PSQHTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLY
        P Q  P    S ++ +  +   +  + R+N+KTYW +
Subjt:  PSQHTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLY

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.9e-0627.81Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQ-ATPPTGPNVASP
        +LL+ ++ G  INVG +I  EI AC  ++ G LFF SLITRLC+  +     +EE+      ID +++ R  Q+   +   + S+S+ AT  +       
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQ-ATPPTGPNVASP

Query:  SQHTPFTGPSPSSEALGIVYRQ--LDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK
         Q         S + +   +    L    +  + +W Y+ ERD A+++   +      P FP FP+ +L   + +Y+ E D+D   +
Subjt:  SQHTPFTGPSPSSEALGIVYRQ--LDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]7.3e-1029.27Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPS
        +LLY ++ G  INVG +I  EI AC  +++G LFF SLIT+LC+  +     +EE+      ID +++ R  Q+   +   + STS+      P VAS  
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPS

Query:  QHTPFTGPSPSSEALGIVYRQLDQIRENL---------------------KTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDE
                  SS A G + +QL  + + L                     + +W Y+ ERD A+++   +      P FP FP+ LL   + +Y+ E D+
Subjt:  QHTPFTGPSPSSEALGIVYRQLDQIRENL---------------------KTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDE

Query:  DNDEK
        D   +
Subjt:  DNDEK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.5e-0727.87Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQ
        +LL+ ++ G  INVG +I  EI AC  ++ G LFF SLITRLC+    ++  +EE+      ID   + ++ Q       +  T     P+    A+ S 
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQ

Query:  HTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK
                   +AL     Q +   +  + +W Y+ ERD A+++   +      P FP FP+ +L   + +Y+ E D+D   +
Subjt:  HTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.4e-0627.81Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQ-ATPPTGPNVASP
        +LL+ ++ G  INVG +I  EI AC  ++ G LFF SLITRLC+  +     +EE+      ID +++ R  Q+   +   + S+S+ AT  +       
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQ-ATPPTGPNVASP

Query:  SQHTPFTGPSPSSEALGIVYRQ--LDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK
         Q         S + +   +    L    +  + +W Y+ ERD A+++   +      P FP FP+ +L   + +Y+ E D+D   +
Subjt:  SQHTPFTGPSPSSEALGIVYRQ--LDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK

A0A2P5CEY2 Uncharacterized protein3.5e-1029.27Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPS
        +LLY ++ G  INVG +I  EI AC  +++G LFF SLIT+LC+  +     +EE+      ID +++ R  Q+   +   + STS+      P VAS  
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTID-LSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPS

Query:  QHTPFTGPSPSSEALGIVYRQLDQIRENL---------------------KTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDE
                  SS A G + +QL  + + L                     + +W Y+ ERD A+++   +      P FP FP+ LL   + +Y+ E D+
Subjt:  QHTPFTGPSPSSEALGIVYRQLDQIRENL---------------------KTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDE

Query:  DNDEK
        D   +
Subjt:  DNDEK

A0A2P5DXM3 Uncharacterized protein7.4e-0827.87Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQ
        +LL+ ++ G  INVG +I  EI AC  ++ G LFF SLITRLC+    ++  +EE+      ID   + ++ Q       +  T     P+    A+ S 
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQ

Query:  HTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK
                   +AL     Q +   +  + +W Y+ ERD A+++   +      P FP FP+ +L   + +Y+ E D+D   +
Subjt:  HTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEK

A0A392PCH7 Uncharacterized protein6.9e-0632.12Show/hide
Query:  MLLYCLIKGLGINVGSIIRDEILACGRKRA--GKLFFGSLITRLCQRVKI-VLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVAS
        +LL+C+I G  INVG II  EI+ C  K++  G L+F  LIT LC++  + V G+DE    F+PT          Q +I+   K +T +           
Subjt:  MLLYCLIKGLGINVGSIIRDEILACGRKRA--GKLFFGSLITRLCQRVKI-VLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVAS

Query:  PSQHTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLY
        P Q  P    S ++ +  +   +  + R+N+KTYW +
Subjt:  PSQHTPFTGPSPSSEALGIVYRQLDQIRENLKTYWLY

A0A7J6FZ22 Uncharacterized protein1.3e-0732.61Show/hide
Query:  LLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQH
        +LYC++KG  INVG +I  EI  C  +  GKLFF  LIT  C+   + +  DE+                    + RK   S     P   P   +PS  
Subjt:  LLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQH

Query:  TPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERD
        T  T   P  E L        Q+ E L+T+W Y  ERD
Subjt:  TPFTGPSPSSEALGIVYRQLDQIRENLKTYWLYANERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACTCTATTGTCTTATAAAGGGGTTGGGGATCAACGTAGGGAGCATTATCAGGGATGAGATTTTAGCTTGTGGGAGAAAGCGAGCAGGCAAGCTTTTCTTTGGATC
ACTCATCACCAGGCTTTGCCAAAGGGTGAAGATCGTTCTGGGCAAGGACGAGGAGCGTCACTTTTTCAAGCCGACCATTGACCTGTCCTTGATCAGGAAGCTCCAGCAGA
ACAGTATCCAGAGGAAAGACAAAGCCTCTACATCCCAGGCTACTCCACCTACAGGGCCGAATGTAGCCTCTCCATCCCAGCACACTCCTTTTACAGGGCCCTCACCATCA
TCGGAGGCCCTAGGCATTGTCTACCGCCAGTTAGATCAAATTAGAGAGAACCTGAAGACGTACTGGTTATATGCAAATGAGAGGGATGAAGCTATTAGAGAGTTCGATCT
CTCGATTGCCCCGAGTATCGCTCCGGTCTTTCCAGATTTCCCTAAATCGCTGCTGCCCCAAGAAGAAGAGGATTATGATGAAGAGGATGATGAAGATAATGATGAGAAAG
AGAGTTCCTCGGACGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACTCTATTGTCTTATAAAGGGGTTGGGGATCAACGTAGGGAGCATTATCAGGGATGAGATTTTAGCTTGTGGGAGAAAGCGAGCAGGCAAGCTTTTCTTTGGATC
ACTCATCACCAGGCTTTGCCAAAGGGTGAAGATCGTTCTGGGCAAGGACGAGGAGCGTCACTTTTTCAAGCCGACCATTGACCTGTCCTTGATCAGGAAGCTCCAGCAGA
ACAGTATCCAGAGGAAAGACAAAGCCTCTACATCCCAGGCTACTCCACCTACAGGGCCGAATGTAGCCTCTCCATCCCAGCACACTCCTTTTACAGGGCCCTCACCATCA
TCGGAGGCCCTAGGCATTGTCTACCGCCAGTTAGATCAAATTAGAGAGAACCTGAAGACGTACTGGTTATATGCAAATGAGAGGGATGAAGCTATTAGAGAGTTCGATCT
CTCGATTGCCCCGAGTATCGCTCCGGTCTTTCCAGATTTCCCTAAATCGCTGCTGCCCCAAGAAGAAGAGGATTATGATGAAGAGGATGATGAAGATAATGATGAGAAAG
AGAGTTCCTCGGACGAGGAATAG
Protein sequenceShow/hide protein sequence
MLLYCLIKGLGINVGSIIRDEILACGRKRAGKLFFGSLITRLCQRVKIVLGKDEERHFFKPTIDLSLIRKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFTGPSPS
SEALGIVYRQLDQIRENLKTYWLYANERDEAIREFDLSIAPSIAPVFPDFPKSLLPQEEEDYDEEDDEDNDEKESSSDEE