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Lag0039259 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039259
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:40099665..40100810
RNA-Seq ExpressionLag0039259
SyntenyLag0039259
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCTTCGGAGCTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAGCATTTATTCTGCTTTGCTTGCCAATTTGCTCTGTTGTATCCATCCCGACGGTGCGTA
CACTCAGTCAGGGGAAACTTGGGGAGGCCTAGGAAATTCTCAGGCCCCTCTTCAAGTATTGCATTCGTCCCAGGGGTGCGTGCACTCTACTGGGGAAAAAGCTTGGGGAG
GCCTAGGAAGCTCCCGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTGTGGGGAAAAGCTTGGGAAGGCCGAGGAAATTCCCGAGCCTCTCTTC
AAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTATTGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGAGTCATGGTCATCCCAGGGGTGCG
TACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATTCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCT
TCAAGCGTCATTGTCATCCCAGGGATGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTG
CGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGAGTGCATACACTCTTCTGGGGAAAGGCTTGG
GGAGGCCTAGGAAGTTCCTGGGCCTCTCTTCAAGTTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTC
TCTTCAAGCTGTTGTATTCATCCCGACGGTGTGTACACTCAATCGGGGGAGGTACGGAAGTCTGGCCTCTACAAGGATCATTCCTGTCTGGCCACTAGTGTTACATCCTA
TGGAAAAAGCACTTTATGCAAAACAGAATGCAAAGAACTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCTTCGGAGCTGGGATGCTCGGCCTCGGCCTTGGCATGAGGCCGAGCATTTATTCTGCTTTGCTTGCCAATTTGCTCTGTTGTATCCATCCCGACGGTGCGTA
CACTCAGTCAGGGGAAACTTGGGGAGGCCTAGGAAATTCTCAGGCCCCTCTTCAAGTATTGCATTCGTCCCAGGGGTGCGTGCACTCTACTGGGGAAAAAGCTTGGGGAG
GCCTAGGAAGCTCCCGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTGTGGGGAAAAGCTTGGGAAGGCCGAGGAAATTCCCGAGCCTCTCTTC
AAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTATTGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGAGTCATGGTCATCCCAGGGGTGCG
TACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATTCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCT
TCAAGCGTCATTGTCATCCCAGGGATGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTG
CGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGAGTGCATACACTCTTCTGGGGAAAGGCTTGG
GGAGGCCTAGGAAGTTCCTGGGCCTCTCTTCAAGTTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTC
TCTTCAAGCTGTTGTATTCATCCCGACGGTGTGTACACTCAATCGGGGGAGGTACGGAAGTCTGGCCTCTACAAGGATCATTCCTGTCTGGCCACTAGTGTTACATCCTA
TGGAAAAAGCACTTTATGCAAAACAGAATGCAAAGAACTTCATTAA
Protein sequenceShow/hide protein sequence
MVGFGAGMLGLGLGMRPSIYSALLANLLCCIHPDGAYTQSGETWGGLGNSQAPLQVLHSSQGCVHSTGEKAWGGLGSSRASLQASWSSQGCVHSCGEKLGKAEEIPEPLF
KRHGHPRGAYTLIGKGLGRPRKFPSLSSRVMVIPGVRTLFWGKAWGGQGNSRASLQASWSSQGCVHSSGERLGEAEEIPEPLFKRHGHSRGAYTLLGKGLGRPRKFPSLS
SSVIVIPGMRTLFWGKAWGGRGNSRASLQASWSSQGCVHSSGERLGEAQEIPEPLFKRHGHPRSAYTLLGKGLGRPRKFLGLSSSCHGHPRGAYTLLGKSLGRPRKFPSL
SSSCCIHPDGVYTQSGEVRKSGLYKDHSCLATSVTSYGKSTLCKTECKELH