; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039270 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039270
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr2:40306499..40309768
RNA-Seq ExpressionLag0039270
SyntenyLag0039270
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]5.7e-16068.62Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T+  T E+RM E+++ +N LMKA+EE+D +I  LKN IE++  AESS T  +KN NKGK I+Q+ QPQ STSIASLS+QQLQ+MI N IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDN+R P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------
         VSM ELT TKQRKGE V++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R N DLL+    +      
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------

Query:  --------TIEESMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGH
                  +E+MVV+TT    + K    EKRQ  G     TLKERQ+K+YPFPD+++PDML+QLLE QLI+LP+CKRP EM +V+DP YCKYHRV+ H
Subjt:  --------TIEESMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGH

Query:  PVERCFVLKDLIIKLAKEGKIELDLNE
        PVE+CFVLK+LI+KLA + KIEL+L++
Subjt:  PVERCFVLKDLIIKLAKEGKIELDLNE

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]3.1e-0445.83Show/hide
Query:  KENFATSYCINVEEVDDSEKGE----QRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISF
        K   A +  I VEE  DSE+G+    QR+SVFDRI     RPSVFQR+S +  ++ NQ    +STR SAFQRL  +TS K   S S     +K +F
Subjt:  KENFATSYCINVEEVDDSEKGE----QRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISF

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.8e-15965.49Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS   +VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFDWY DLEPESID+WE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------
         VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+           
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------

Query:  ------EETIEESMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
                 I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPFPD+++ DMLEQLLE QLI+LP+CKRPE+ EKVDDP YCKYHRV+
Subjt:  ------EETIEESMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK
         HPVE+CFVLK+LI+KLA+E KIELD++E  +  + A     NV    ++DD  K
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-17158.99Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS    VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LY KPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF++TC+ AGTRGDLLVKQFVRTLKGNA DWY DLEPESID+WE+LER+FLNRFYSTR 
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------
         VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+           
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------

Query:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
                 I+ESMVV+ T  KS SK K     R+ +G      TLKERQ+K+YPFPD+++ DMLEQLLE QLI+LP+CKRPE+  KVDDP YCKYHRV+
Subjt:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNE-EKENFATSYCIN------------------------------------------------------VEEV
         HPVE+CFVLK+LI+KLA+E KIELD++E  + N A     N                                                       +EV
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNE-EKENFATSYCIN------------------------------------------------------VEEV

Query:  DDSEKGEQRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLK
        ++S +  QRTSVFDRIKP TTR SVFQR+S+ TKEEENQC     TR S  +RL +ST KK +PS+S FDRLK
Subjt:  DDSEKGEQRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLK

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-16250.81Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS    VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFD Y DLEPESID+WE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLS---------N
         VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI +R  +D L+          N
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLS---------N

Query:  D-----EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
        D        I+ESMVV+ T  KS SK K     R+ +G      TLKERQ+K+YPF D+++ DMLEQLLE QLI+LPKCKRP++ EKVDDP YCKYHRV+
Subjt:  D-----EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNEEKE--------------------------NFATSYCI----------------------------------
         HPVE+CFVLK+LI+KLA+E KIEL+++E  +                           F TS                                     
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNEEKE--------------------------NFATSYCI----------------------------------

Query:  ---------------------------------------------------------------------------------------NVEEVDDSEKGEQ
                                                                                               + +EV++  +  Q
Subjt:  ---------------------------------------------------------------------------------------NVEEVDDSEKGEQ

Query:  RTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISFFQIQCLARLK
        RTSVFDRIKP TTR SVFQR+SM TKEEENQC     TR S F+RL +S SKK++PS+S FDRLK  +  Q + +  LK
Subjt:  RTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISFFQIQCLARLK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]9.1e-15863.88Show/hide
Query:  MEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNYIKAQYGGPTQDSLLYS
        +E  M EM+  IN LMK ++E+D +I  LK Q++ +  AESSQT VVK  +KGK +VQ++QP Q STS+ASLS+QQLQDMITN I+AQYGGP+Q S +YS
Subjt:  MEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQP-QCSTSIASLSIQQLQDMITNYIKAQYGGPTQDSLLYS

Query:  KPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTVSMFE
        KPYTK IDNLR P+GYQPPKFQQFDGKGNPKQH+AHFVETC+NAG+RGD LV+QFVR+LKGNAF+WYTDLEPESI+SWE+LE+EFLNRFYSTRRTVSM E
Subjt:  KPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTVSMFE

Query:  LTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------------
        LTNTKQRKGE V++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIASR  +D L+   ++            
Subjt:  LTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------------

Query:  --TIEESMVVNTT-LPKSSSKEKR---QTNGT--HHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERC
          T +ESMVVNTT L  S  KE R   + +G+    LTLKERQ+K+YPFPD++I DMLEQLLE QLI+LP+CKRPE+  KVDDP YCKYHRV+ HPVE+C
Subjt:  --TIEESMVVNTT-LPKSSSKEKR---QTNGT--HHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERC

Query:  FVLKDLIIKLAKEGKIELDLNEEKENFATSYCINVEEVDDSEKGEQRTSV--FDRIKPPTTRPSVFQRMSMTTKEEENQ
        FVLK+LI++LA+E +IELDL E  +       I  E        EQR S+  F   +P   +   FQ +S    + E +
Subjt:  FVLKDLIIKLAKEGKIELDLNEEKENFATSYCINVEEVDDSEKGEQRTSV--FDRIKPPTTRPSVFQRMSMTTKEEENQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H2.8e-16068.62Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T+  T E+RM E+++ +N LMKA+EE+D +I  LKN IE++  AESS T  +KN NKGK I+Q+ QPQ STSIASLS+QQLQ+MI N IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDN+R P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------
         VSM ELT TKQRKGE V++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R N DLL+    +      
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEE------

Query:  --------TIEESMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGH
                  +E+MVV+TT    + K    EKRQ  G     TLKERQ+K+YPFPD+++PDML+QLLE QLI+LP+CKRP EM +V+DP YCKYHRV+ H
Subjt:  --------TIEESMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGH

Query:  PVERCFVLKDLIIKLAKEGKIELDLNE
        PVE+CFVLK+LI+KLA + KIEL+L++
Subjt:  PVERCFVLKDLIIKLAKEGKIELDLNE

A0A5A7TZU9 Ribonuclease H1.5e-0445.83Show/hide
Query:  KENFATSYCINVEEVDDSEKGE----QRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISF
        K   A +  I VEE  DSE+G+    QR+SVFDRI     RPSVFQR+S +  ++ NQ    +STR SAFQRL  +TS K   S S     +K +F
Subjt:  KENFATSYCINVEEVDDSEKGE----QRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISF

A0A5A7TZU9 Ribonuclease H2.3e-15965.49Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS   +VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFDWY DLEPESID+WE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------
         VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+           
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------

Query:  ------EETIEESMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
                 I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPFPD+++ DMLEQLLE QLI+LP+CKRPE+ EKVDDP YCKYHRV+
Subjt:  ------EETIEESMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK
         HPVE+CFVLK+LI+KLA+E KIELD++E  +  + A     NV    ++DD  K
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK

A0A5A7URH1 Ty3-gypsy retrotransposon protein7.0e-17258.99Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS    VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LY KPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF++TC+ AGTRGDLLVKQFVRTLKGNA DWY DLEPESID+WE+LER+FLNRFYSTR 
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------
         VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+           
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------

Query:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
                 I+ESMVV+ T  KS SK K     R+ +G      TLKERQ+K+YPFPD+++ DMLEQLLE QLI+LP+CKRPE+  KVDDP YCKYHRV+
Subjt:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNE-EKENFATSYCIN------------------------------------------------------VEEV
         HPVE+CFVLK+LI+KLA+E KIELD++E  + N A     N                                                       +EV
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNE-EKENFATSYCIN------------------------------------------------------VEEV

Query:  DDSEKGEQRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLK
        ++S +  QRTSVFDRIKP TTR SVFQR+S+ TKEEENQC     TR S  +RL +ST KK +PS+S FDRLK
Subjt:  DDSEKGEQRTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLK

A0A5D3BX77 Retrotransposon gag protein7.7e-16350.81Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T   T E RM E+++ +N LMK +EE+D +I  LKN IE++  AESS    VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFD Y DLEPESID+WE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLS---------N
         VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI +R  +D L+          N
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLS---------N

Query:  D-----EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
        D        I+ESMVV+ T  KS SK K     R+ +G      TLKERQ+K+YPF D+++ DMLEQLLE QLI+LPKCKRP++ EKVDDP YCKYHRV+
Subjt:  D-----EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNEEKE--------------------------NFATSYCI----------------------------------
         HPVE+CFVLK+LI+KLA+E KIEL+++E  +                           F TS                                     
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNEEKE--------------------------NFATSYCI----------------------------------

Query:  ---------------------------------------------------------------------------------------NVEEVDDSEKGEQ
                                                                                               + +EV++  +  Q
Subjt:  ---------------------------------------------------------------------------------------NVEEVDDSEKGEQ

Query:  RTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISFFQIQCLARLK
        RTSVFDRIKP TTR SVFQR+SM TKEEENQC     TR S F+RL +S SKK++PS+S FDRLK  +  Q + +  LK
Subjt:  RTSVFDRIKPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISFFQIQCLARLK

A0A5D3D4X3 Ty3-gypsy retrotransposon protein2.2e-15765.05Show/hide
Query:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ
        M+T+    E+RM E+++ +N LMK +EE+D +I  LKN IE++  AESS    VKN +KGK ++Q+ QPQ STSIASLS+QQLQ+MI + IK QYGGP Q
Subjt:  MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQ

Query:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR
           LYSKPYTK IDNLR P GYQPPKFQQFDGKGNPKQH+AHF+ETC+ AGTRGDLLVKQFVRTLKGNAFDWY DLEPESID+WE+LER+FLNRFYSTRR
Subjt:  DSLLYSKPYTKMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRR

Query:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------
         VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELSAVEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D L+           
Subjt:  TVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSND--------

Query:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV
                 I+ESMVV+ T  KS SK K     R+ +G      TLKERQ+K+YPFPD+++ DMLEQLLE QLI+LP+CKRPE+  KVDDP YCKYHRV+
Subjt:  ------EETIEESMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVV

Query:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK
         HPVE+CFVLK+LI+KLA+E KIELD++E  +  + A     NV    ++DD  K
Subjt:  GHPVERCFVLKDLIIKLAKEGKIELDLNE--EKENFATSYCINV---EEVDDSEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAGCTAAA
GAATCAGATTGAGAACCAACATATCGCAGAATCAAGTCAAACCCAAGTCGTAAAAAATCACAACAAAGGAAAGACTATAGTACAAGATGATCAACCACAATGTTCTACTT
CGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTATATCAAAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACT
AAGATGATTGATAACTTGAGAACGCCAATCGGGTATCAGCCACCGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATG
CAAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTT
GGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTTTACAGCACTAGAAGAACCGTTAGTATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAAC
TACATAAATCGCTGGAGAGCCATGAGTTTAGATTGCAAAGATCGCCTCACTGAACTCTCTGCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCT
TAAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCACGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAATCAAGACCTTCTACTCTCTAACGACGAAG
AGACTATAGAAGAATCTATGGTTGTAAACACAACCCTTCCCAAGTCGTCTTCGAAAGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAG
AAAATCTATCCTTTCCCTGATGCCAACATCCCTGATATGTTGGAACAACTACTGGAAGTGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGT
CGATGATCCCAAGTATTGCAAGTATCATCGAGTTGTTGGTCATCCAGTGGAAAGATGCTTCGTCCTAAAGGACTTAATTATAAAGCTAGCTAAGGAAGGAAAAATTGAGC
TTGACCTTAATGAGGAAAAAGAAAACTTTGCAACTTCCTATTGCATCAATGTAGAAGAAGTTGACGATTCCGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATC
AAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCACGAAAGAAGAAGAAAATCAATGTTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAG
GCTATGTGTCTCCACATCGAAGAAAAGTCAACCTTCATCATCTGTCTTTGATCGCCTCAAGAAGATTTCATTCTTTCAAATTCAATGTCTCGCTCGCCTCAAGTTCGGTG
TCTCATTCACCTTAAGTTCGTTGCTCCCTCTTCTCTCCAAGTTCGAGTGTTCTTACGATGTACTCTACTTGTGTTGTTCTCTCTCCGTTCAAATTCGAAGTTTCCTTTCT
CCAAGTTCAAAGGATCCTCCAAGTTTTCCTTCTCCCCAAGTCCGAAGGTTCTCACGTTGCTTTGTTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGTTGCTTCGC
TGCAGTTTCCTTCCTCCAAGTTCGAAGGATCCTCCAAGTTTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTC
TCACGTTGCTTCGCGACAGTTTCCTTCCTCCAAGTTCGAATGATCCTCCAAGTCGAAGGTTCTCACGTTGCTCTGCCGCAGTTCCTTCTTCCAAGTTCGAAGGTTCTCAT
CCGCTTCGTTGGAGTCCTTTCTCCCCAAGTTTGAAACTTCTCACGTTGCTCCACCGCAGTTCCTTCTTCCAAGTTCGGAGGTTCTCATCCGCTTCACTAGAGTTCTTTCT
CCCCAAGTTAGAAAATTCTCATGTGCTTCGTTGCAGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCGCTGCTTCTCTCCATCCAAGTTCGACGGTGCTTCTCTCCGAT
CAAGTTTGAAGGTGCTTCTCTCCGTTCAAGTTCGAAGGTGCTTCTCTCTACCCCTCCTTTTGAAGGTTCGCCACTATGGTTATCCTTCTCCAAGTTCGAAGGTTCACCGT
TGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGACCTCGCCTCGCTTCATCTTCAAAGGTTGGCAACATCGCTTCATCTTCAAAGGTTGGCGGTTGACGGCTTTGGCCTC
GTTTTATCTTCAAATGTTGGTAGTTGACGACATCAACCTCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGACTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAGCTAAA
GAATCAGATTGAGAACCAACATATCGCAGAATCAAGTCAAACCCAAGTCGTAAAAAATCACAACAAAGGAAAGACTATAGTACAAGATGATCAACCACAATGTTCTACTT
CGATCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTATATCAAAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACT
AAGATGATTGATAACTTGAGAACGCCAATCGGGTATCAGCCACCGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGACATG
CAAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTT
GGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTTTACAGCACTAGAAGAACCGTTAGTATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAAC
TACATAAATCGCTGGAGAGCCATGAGTTTAGATTGCAAAGATCGCCTCACTGAACTCTCTGCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCT
TAAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCACGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAATCAAGACCTTCTACTCTCTAACGACGAAG
AGACTATAGAAGAATCTATGGTTGTAAACACAACCCTTCCCAAGTCGTCTTCGAAAGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAG
AAAATCTATCCTTTCCCTGATGCCAACATCCCTGATATGTTGGAACAACTACTGGAAGTGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGT
CGATGATCCCAAGTATTGCAAGTATCATCGAGTTGTTGGTCATCCAGTGGAAAGATGCTTCGTCCTAAAGGACTTAATTATAAAGCTAGCTAAGGAAGGAAAAATTGAGC
TTGACCTTAATGAGGAAAAAGAAAACTTTGCAACTTCCTATTGCATCAATGTAGAAGAAGTTGACGATTCCGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATC
AAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCACGAAAGAAGAAGAAAATCAATGTTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAG
GCTATGTGTCTCCACATCGAAGAAAAGTCAACCTTCATCATCTGTCTTTGATCGCCTCAAGAAGATTTCATTCTTTCAAATTCAATGTCTCGCTCGCCTCAAGTTCGGTG
TCTCATTCACCTTAAGTTCGTTGCTCCCTCTTCTCTCCAAGTTCGAGTGTTCTTACGATGTACTCTACTTGTGTTGTTCTCTCTCCGTTCAAATTCGAAGTTTCCTTTCT
CCAAGTTCAAAGGATCCTCCAAGTTTTCCTTCTCCCCAAGTCCGAAGGTTCTCACGTTGCTTTGTTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGTTGCTTCGC
TGCAGTTTCCTTCCTCCAAGTTCGAAGGATCCTCCAAGTTTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGTTGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTC
TCACGTTGCTTCGCGACAGTTTCCTTCCTCCAAGTTCGAATGATCCTCCAAGTCGAAGGTTCTCACGTTGCTCTGCCGCAGTTCCTTCTTCCAAGTTCGAAGGTTCTCAT
CCGCTTCGTTGGAGTCCTTTCTCCCCAAGTTTGAAACTTCTCACGTTGCTCCACCGCAGTTCCTTCTTCCAAGTTCGGAGGTTCTCATCCGCTTCACTAGAGTTCTTTCT
CCCCAAGTTAGAAAATTCTCATGTGCTTCGTTGCAGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCGCTGCTTCTCTCCATCCAAGTTCGACGGTGCTTCTCTCCGAT
CAAGTTTGAAGGTGCTTCTCTCCGTTCAAGTTCGAAGGTGCTTCTCTCTACCCCTCCTTTTGAAGGTTCGCCACTATGGTTATCCTTCTCCAAGTTCGAAGGTTCACCGT
TGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGACCTCGCCTCGCTTCATCTTCAAAGGTTGGCAACATCGCTTCATCTTCAAAGGTTGGCGGTTGACGGCTTTGGCCTC
GTTTTATCTTCAAATGTTGGTAGTTGACGACATCAACCTCGCTTGA
Protein sequenceShow/hide protein sequence
MMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKNQIENQHIAESSQTQVVKNHNKGKTIVQDDQPQCSTSIASLSIQQLQDMITNYIKAQYGGPTQDSLLYSKPYT
KMIDNLRTPIGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTVSMFELTNTKQRKGELVVN
YINRWRAMSLDCKDRLTELSAVEMCIQGMHWELLYILKGIKPRTFEELATHAHDMELSIASRENQDLLLSNDEETIEESMVVNTTLPKSSSKEKRQTNGTHHLTLKERQK
KIYPFPDANIPDMLEQLLEVQLIELPKCKRPEEMEKVDDPKYCKYHRVVGHPVERCFVLKDLIIKLAKEGKIELDLNEEKENFATSYCINVEEVDDSEKGEQRTSVFDRI
KPPTTRPSVFQRMSMTTKEEENQCLVSTSTRPSAFQRLCVSTSKKSQPSSSVFDRLKKISFFQIQCLARLKFGVSFTLSSLLPLLSKFECSYDVLYLCCSLSVQIRSFLS
PSSKDPPSFPSPQVRRFSRCFVAVPSPQVRRFSRCFAAVSFLQVRRILQVFLLPKFEGSHVASLQFLPPSSKVLTLLRDSFLPPSSNDPPSRRFSRCSAAVPSSKFEGSH
PLRWSPFSPSLKLLTLLHRSSFFQVRRFSSASLEFFLPKLENSHVLRCSSFSKFEGASLRCFSPSKFDGASLRSSLKVLLSVQVRRCFSLPLLLKVRHYGYPSPSSKVHR
CSFSNVWRRLTTSPRFIFKGWQHRFIFKGWRLTALASFYLQMLVVDDINLA