; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039274 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039274
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr2:40322090..40322560
RNA-Seq ExpressionLag0039274
SyntenyLag0039274
Gene Ontology termsNA
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147769.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]5.0e-3347.33Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + FG+   E  +SWT+F  ++   IG +N LV VSDRH+SI  +  TV P+AA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        HV C+HHL   L  KF++     ++ KA KAF+ ++F+ +W Q+   P++
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

XP_022156566.1 uncharacterized protein LOC111023441 [Momordica charantia]1.2e-3147.3Show/hide
Query:  IRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHV
        I  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + F +   E+ +SWT+F  ++   IG +N LV VSDRH+SI  +  TV PDAA+V
Subjt:  IRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHV

Query:  YCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
         C+HHL   L  KF++      + KA K F+ ++F+ +W Q+   PK+
Subjt:  YCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

XP_022157237.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]2.5e-3246.67Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + FG+      +SWT+F  ++   IG +N LV +SDRH+SI  +  TV PDAA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        HV C+HHL   L  KF++     ++ KA KAF+ ++F+ +W Q+   P +
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

XP_038882416.1 protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida]2.4e-3555.8Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M + ++IRGFLN IRPIL+V  TH+RGK+ GKLL A G+DGNNQIY V FGI  GET ESW +F +++  AIGQ++ +VIVSDRH SI K   TV P+A 
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQ
        H  CIHHL+ NL   FK+ D + ++ KA KA R+  F+
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQ

XP_038885923.1 uncharacterized protein LOC120076231 [Benincasa hispida]3.7e-3653.38Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M   +TIRGFLN IRP+L+VD TH+R K+ GKLL A  +DGNNQIY V F I  GET ESW +F +++  AIGQ++ LVIVSDRH SI KA  TV P+A 
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCP
        +  CIHHL+ NL   FK+ D   ++ K+ KA R++ F+  WSQ    P
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCP

TrEMBL top hitse value%identityAlignment
A0A6J1D1Z5 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.4e-3347.33Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + FG+   E  +SWT+F  ++   IG +N LV VSDRH+SI  +  TV P+AA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        HV C+HHL   L  KF++     ++ KA KAF+ ++F+ +W Q+   P++
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

A0A6J1DL12 uncharacterized protein LOC1110220771.0e-3144.67Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +   IRGF + IRP+LV+D  H++GK+ G +LTA  +DGNNQIY + FGI   E+  SW++F  ++   IG+++ L+ VSDRH SI K+ + V P+AA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        H  C+HHL  NLK KFK+ D   +++ A KAF+ + F+ ++SQ+   P +
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.2e-3246.67Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + FG+      +SWT+F  ++   IG +N LV +SDRH+SI  +  TV PDAA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        HV C+HHL   L  KF++     ++ KA KAF+ ++F+ +W Q+   P +
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

A0A6J1DU86 uncharacterized protein LOC1110244861.3e-3145.33Show/hide
Query:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA
        M +  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + FG+   E  +SWT+F  ++   IG +N LV + D+H+SI  +  TV PDAA
Subjt:  MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
        HV C+HHL   L  KF++     +  KA K F+ ++F+ +W Q+   P++
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

A0A6J1DVC0 uncharacterized protein LOC1110234416.0e-3247.3Show/hide
Query:  IRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHV
        I  +IRGF + IRPILVVD  H++GK+ G LLTA  IDGNNQIY + F +   E+ +SWT+F  ++   IG +N LV VSDRH+SI  +  TV PDAA+V
Subjt:  IRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHV

Query:  YCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI
         C+HHL   L  KF++      + KA K F+ ++F+ +W Q+   PK+
Subjt:  YCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKI

SwissProt top hitse value%identityAlignment
P19775 Transposase for insertion sequence element IS256 in transposon Tn40017.9e-0525.81Show/hide
Query:  PILVVDETHIRGKFGGKLLT-----AVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE
        P L+ D  +I+ +   ++L+     A+GI  +    ++GF I  GE+ E+WT FF  + +  G     +++SD HK ++ A +    + +   C  H   
Subjt:  PILVVDETHIRGKFGGKLLT-----AVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE

Query:  NLKTKFKDHDFIPLYLKATKAFRD
        N+        F  +  K +K+FR+
Subjt:  NLKTKFKDHDFIPLYLKATKAFRD

P59787 Transposase for insertion sequence element IS256 in transposon Tn40017.9e-0525.81Show/hide
Query:  PILVVDETHIRGKFGGKLLT-----AVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE
        P L+ D  +I+ +   ++L+     A+GI  +    ++GF I  GE+ E+WT FF  + +  G     +++SD HK ++ A +    + +   C  H   
Subjt:  PILVVDETHIRGKFGGKLLT-----AVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE

Query:  NLKTKFKDHDFIPLYLKATKAFRD
        N+        F  +  K +K+FR+
Subjt:  NLKTKFKDHDFIPLYLKATKAFRD

Q3EBQ3 Protein FAR1-RELATED SEQUENCE 23.9e-0421.58Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVES-WTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQEN
        S   +++ D  ++R  +       +G+  + Q  L+G  +  GE  ES +++ FR   +A+G   P V+++D+ K +      V PD  H++C+  +   
Subjt:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVES-WTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQEN

Query:  LKTKF-----KDHDFIPLYLK-ATKAFRDTEFQEFWSQI
        +         +D  F+  +      ++ D  F+  WS +
Subjt:  LKTKF-----KDHDFIPLYLK-ATKAFRDTEFQEFWSQI

Q6NQJ7 Protein FAR1-RELATED SEQUENCE 43.2e-0621.74Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL
        S   ++  + ++   K+   L+  VG++ + Q  L+G G+   +TV ++ +  +    A+G   P V+++D++ +I  A   V+P+  H YC+ H+ + L
Subjt:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL

Query:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI
               + ++D     L+    +++ + EF   W ++
Subjt:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI

Q9SWG3 Protein FAR-RED IMPAIRED RESPONSE 11.1e-0624.82Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTA--VGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE
        S   ++  D T++  KF  KL  A  +G++ ++Q  L+G  +   E++E++ +  +   RA+G   P VI++D+ K ++ A   ++P+  H + + H+ E
Subjt:  SIRPILVVDETHIRGKFGGKLLTA--VGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE

Query:  NLKTKF-----KDHDFIPLYLKAT-KAFRDTEFQEFW
         +   F     +  +F+  + K   +++ D EF   W
Subjt:  NLKTKF-----KDHDFIPLYLKAT-KAFRDTEFQEFW

Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase5.8e-1127.4Show/hide
Query:  TIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSIL-----KAAQTVIPDAA
        +I+GF    RP++VVD  ++ GK+  KL+ A   D  NQ + + F + +  +V+SW +F  +I   + Q   + ++S     IL       +Q   P A 
Subjt:  TIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSIL-----KAAQTVIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYL--KATKAFRDTEFQEFWSQI
        H +C++HL   L +     D+   +L  +A  + +  EF  +  +I
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYL--KATKAFRDTEFQEFWSQI

AT1G64260.1 MuDR family transposase2.1e-1327.78Show/hide
Query:  TIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQT-----VIPDAA
        +I GF    RP++VVD   + GK+  KL+ A G+D  N+ + + F + +  + +SW +FF KI   + Q   L ++S   + I+            P A 
Subjt:  TIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQT-----VIPDAA

Query:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQI
        H +C++HL+      F+D++   L  +A    +  EF  + + I
Subjt:  HVYCIHHLQENLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQI

AT1G76320.1 FAR1-related sequence 42.3e-0721.74Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL
        S   ++  + ++   K+   L+  VG++ + Q  L+G G+   +TV ++ +  +    A+G   P V+++D++ +I  A   V+P+  H YC+ H+ + L
Subjt:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL

Query:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI
               + ++D     L+    +++ + EF   W ++
Subjt:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI

AT1G76320.2 FAR1-related sequence 42.3e-0721.74Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL
        S   ++  + ++   K+   L+  VG++ + Q  L+G G+   +TV ++ +  +    A+G   P V+++D++ +I  A   V+P+  H YC+ H+ + L
Subjt:  SIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQENL

Query:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI
               + ++D     L+    +++ + EF   W ++
Subjt:  K------TKFKDHDFIPLYLKATKAFRDTEFQEFWSQI

AT4G15090.1 FRS (FAR1 Related Sequences) transcription factor family7.8e-0824.82Show/hide
Query:  SIRPILVVDETHIRGKFGGKLLTA--VGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE
        S   ++  D T++  KF  KL  A  +G++ ++Q  L+G  +   E++E++ +  +   RA+G   P VI++D+ K ++ A   ++P+  H + + H+ E
Subjt:  SIRPILVVDETHIRGKFGGKLLTA--VGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE

Query:  NLKTKF-----KDHDFIPLYLKAT-KAFRDTEFQEFW
         +   F     +  +F+  + K   +++ D EF   W
Subjt:  NLKTKF-----KDHDFIPLYLKAT-KAFRDTEFQEFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTAGGTCCACGATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGAGACCCACATAAGGGGAAAGTTCGGTGGAAAGCTCCTAACTGCAGT
AGGCATCGATGGAAACAACCAAATATACCTCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGTCGAATCGTGGACCTACTTTTTTCGAAAAATCGATCGTGCTATTGGTC
AACTTAATCCCCTTGTGATTGTATCTGACAGACACAAGAGCATATTGAAGGCAGCACAGACTGTGATTCCTGATGCAGCCCACGTTTACTGTATCCACCATCTACAAGAA
AACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCCACTCTACCTTAAAGCAACGAAGGCATTTCGTGATACAGAGTTTCAGGAATTTTGGAGCCAAATTCCAATGTG
TCCAAAAATACTTGGAAGAAGTCGGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTAGGTCCACGATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGAGACCCACATAAGGGGAAAGTTCGGTGGAAAGCTCCTAACTGCAGT
AGGCATCGATGGAAACAACCAAATATACCTCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGTCGAATCGTGGACCTACTTTTTTCGAAAAATCGATCGTGCTATTGGTC
AACTTAATCCCCTTGTGATTGTATCTGACAGACACAAGAGCATATTGAAGGCAGCACAGACTGTGATTCCTGATGCAGCCCACGTTTACTGTATCCACCATCTACAAGAA
AACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCCACTCTACCTTAAAGCAACGAAGGCATTTCGTGATACAGAGTTTCAGGAATTTTGGAGCCAAATTCCAATGTG
TCCAAAAATACTTGGAAGAAGTCGGACTTGA
Protein sequenceShow/hide protein sequence
MEIRSTIRGFLNSIRPILVVDETHIRGKFGGKLLTAVGIDGNNQIYLVGFGIGRGETVESWTYFFRKIDRAIGQLNPLVIVSDRHKSILKAAQTVIPDAAHVYCIHHLQE
NLKTKFKDHDFIPLYLKATKAFRDTEFQEFWSQIPMCPKILGRSRT