| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN83506.1 hypothetical protein VITISV_027576 [Vitis vinifera] | 1.9e-55 | 43.23 | Show/hide |
Query: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHILPSTLPNTSPSSPLAPAP
++FATAVYLINR+PT LN + P +F T PNY LK FGC CYP L PY+S+KL+ S PSTT P H
Subjt: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHILPSTLPNTSPSSPLAPAP
Query: LASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSD
T + + +Q+ A R P+ L + S P+ + EP +A+K P W++AM EYDAL+ N TW+LV S+ Q +V CKW+F+ RNSD
Subjt: LASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSD
Query: GSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
GSI R+KARLVAKGFHQ DIDY +T+SPVVKP +D+NN FL G L E +M QP GF +P VCKL+KA+YGLKQA R
Subjt: GSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
Query: ASFDRLSQHL
A + L L
Subjt: ASFDRLSQHL
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| PNX92906.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 5.0e-56 | 33.4 | Show/hide |
Query: DLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSL--------TISHCG----YTFHLLPLPEIPLLAKFFSNDHSMMGCTGLASLQAIS
D + WYPD GA++HLT N NNLA + Y G + + +GNG + T+ G F +P E K F+ +++ G+
Subjt: DLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSL--------TISHCG----YTFHLLPLPEIPLLAKFFSNDHSMMGCTGLASLQAIS
Query: PLCQASPTRATSTLNVCFLNL-------------DDSFATAVYLINRLPTTALNGV-CPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP--
+ T + + L D SF AVYLIN+LPT+AL P +LF+TQP+Y LK FGC C+P L PYN++KL FRS P
Subjt: PLCQASPTRATSTLNVCFLNL-------------DDSFATAVYLINRLPTTALNGV-CPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP--
Query: ------------------------STTSHVTQHFPLLSQSPS---------------HILPSTLPNTSPSSPLAPAPLASPTASDSID--IQSPASAEDR
H TQ FP LS P+ H +TLP S PL SP I+ I P +
Subjt: ------------------------STTSHVTQHFPLLSQSPS---------------HILPSTLPNTSPSSPLAPAPLASPTASDSID--IQSPASAEDR
Query: LPVSLTVLSTKHSVPMNAPHD-----------------------ETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRN
T K+ + PH EP + R A+ P W +AMQ EY AL+ N+TW LV H+K + CKW+F++ N
Subjt: LPVSLTVLSTKHSVPMNAPHD-----------------------ETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRN
Query: SDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
DG++ +YKARLVAKGF Q+ D+ ET+SPV+KP +D+NNAFL+G+L E +M QP GFE LVCKL K+LYGLKQA
Subjt: SDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
Query: QRASFDRLSQHLYTKKVVESE
RA ++RL+Q L V S+
Subjt: QRASFDRLSQHLYTKKVVESE
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| RVW87716.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.5e-55 | 41.67 | Show/hide |
Query: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKL------------------------NFRSTPSTTSHVTQHFPLL
D++F T+VYLINRLPT L PL LFH +P+Y LK FGC CYP L P+N +KL + + T S+ S + P
Subjt: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKL------------------------NFRSTPSTTSHVTQHFPLL
Query: SQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSV-PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHT
+ P +LPS+ + S SSP P+ + T++ ++ Q P S+ P + +K+ + A T P + EA++ HWKQAM EY AL+ N+T
Subjt: SQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSV-PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHT
Query: WDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPF
WDLV + +K++ CKWVFK+ N DG+I +YKARLVAKGFHQ A D+ ET+SPVVKP +D+NNAFL+G L E FM QP
Subjt: WDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPF
Query: GFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHL
GF + P VCKL K+LYGLKQA RA F++L Q L
Subjt: GFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHL
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| RVW87716.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-06 | 47.89 | Show/hide |
Query: TASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT-FHLLPLPEIPLLAK
T +++ QDN WYPD GAT+HLT N NNL S++ + + VGNG SL I H G+T F L +P L K
Subjt: TASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT-FHLLPLPEIPLLAK
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| RVW87716.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.2e-55 | 32.92 | Show/hide |
Query: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG-----------------------------------YTF
P Q A+ + W D GA++H+T + NNL++ + Y G + + +G+GT L ISH G Y +
Subjt: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG-----------------------------------YTF
Query: HLLPLPEIPLLA-----KFFSNDHSMMG----CTGLASLQAISPLCQASPTR--------------ATSTLNVCFLNLDD-----SFATAVYLINRLPTT
L P+LA SN H +G SL IS T T + +L + +FATAVYLINRLPTT
Subjt: HLLPLPEIPLLA-----KFFSNDHSMMG----CTGLASLQAISPLCQASPTR--------------ATSTLNVCFLNLDD-----SFATAVYLINRLPTT
Query: ALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP-------------------STTSHVTQHFPLL-SQSPSHILPSTLP--------
LN P +FH PNY LK FGC CYP L PY ++KL RS P ++ +V+ H + S P L +TLP
Subjt: ALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP-------------------STTSHVTQHFPLL-SQSPSHILPSTLP--------
Query: ---------NTSPSS-----------------------PLAPAPLASPTASDSIDIQSPASAEDRLPV--------------SLTVLSTKHSVPMNAP-H
+T PSS P AP P + +A S + E +PV ++T K ++ + P
Subjt: ---------NTSPSS-----------------------PLAPAPLASPTASDSIDIQSPASAEDRLPV--------------SLTVLSTKHSVPMNAP-H
Query: DETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP--------
T P + +A+K +W+QAM EYDAL+ N TW+LV +V CKW+F+I RNSDGSI RYKARLVAKGFHQ +DY ET+SPVVKP
Subjt: DETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP--------
Query: -----------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYT
+D+NNAFL G L E FM QP GF P VCKL KA+YGLKQA RA + L Q L T
Subjt: -----------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYT
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| TYK18915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.2e-57 | 40.85 | Show/hide |
Query: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPST-----TSH-------------VTQH-------FPL
D++F+T+VYLIN LPT L+ + PL +F +PN+ FL+ FGC CYP L PY S+KL+ RSTP T TSH +++H FP
Subjt: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPST-----TSH-------------VTQH-------FPL
Query: LS--------------QSPSH-ILPSTL--------------PNTSPSSPLAPAPLASPTASDSID-------IQSPASAE-------------DRLPVS
S P H I+PS+L NT +P PL + T S D QSP+ E +
Subjt: LS--------------QSPSH-ILPSTL--------------PNTSPSSPLAPAPLASPTASDSID-------IQSPASAE-------------DRLPVS
Query: LTVLSTKHSV----PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADI
+ +KH + + +TE NA+EA +PHWK+AM+ E+ AL N TW L+ + +QKIV CKWVFKI RNS GSI+RYKARLVAKGFHQ+ +I
Subjt: LTVLSTKHSV----PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADI
Query: DYTETYSPVVKPV-------------------DINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
DY ET+SPVVKP+ D+NNAFLHG L E +MEQPFGFE + P+VC+L+KALYGLKQA
Subjt: DYTETYSPVVKPV-------------------DINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3MQ67 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-56 | 33.4 | Show/hide |
Query: DLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSL--------TISHCG----YTFHLLPLPEIPLLAKFFSNDHSMMGCTGLASLQAIS
D + WYPD GA++HLT N NNLA + Y G + + +GNG + T+ G F +P E K F+ +++ G+
Subjt: DLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSL--------TISHCG----YTFHLLPLPEIPLLAKFFSNDHSMMGCTGLASLQAIS
Query: PLCQASPTRATSTLNVCFLNL-------------DDSFATAVYLINRLPTTALNGV-CPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP--
+ T + + L D SF AVYLIN+LPT+AL P +LF+TQP+Y LK FGC C+P L PYN++KL FRS P
Subjt: PLCQASPTRATSTLNVCFLNL-------------DDSFATAVYLINRLPTTALNGV-CPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP--
Query: ------------------------STTSHVTQHFPLLSQSPS---------------HILPSTLPNTSPSSPLAPAPLASPTASDSID--IQSPASAEDR
H TQ FP LS P+ H +TLP S PL SP I+ I P +
Subjt: ------------------------STTSHVTQHFPLLSQSPS---------------HILPSTLPNTSPSSPLAPAPLASPTASDSID--IQSPASAEDR
Query: LPVSLTVLSTKHSVPMNAPHD-----------------------ETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRN
T K+ + PH EP + R A+ P W +AMQ EY AL+ N+TW LV H+K + CKW+F++ N
Subjt: LPVSLTVLSTKHSVPMNAPHD-----------------------ETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRN
Query: SDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
DG++ +YKARLVAKGF Q+ D+ ET+SPV+KP +D+NNAFL+G+L E +M QP GFE LVCKL K+LYGLKQA
Subjt: SDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
Query: QRASFDRLSQHLYTKKVVESE
RA ++RL+Q L V S+
Subjt: QRASFDRLSQHLYTKKVVESE
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| A0A438HTD6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-55 | 41.67 | Show/hide |
Query: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKL------------------------NFRSTPSTTSHVTQHFPLL
D++F T+VYLINRLPT L PL LFH +P+Y LK FGC CYP L P+N +KL + + T S+ S + P
Subjt: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKL------------------------NFRSTPSTTSHVTQHFPLL
Query: SQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSV-PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHT
+ P +LPS+ + S SSP P+ + T++ ++ Q P S+ P + +K+ + A T P + EA++ HWKQAM EY AL+ N+T
Subjt: SQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSV-PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHT
Query: WDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPF
WDLV + +K++ CKWVFK+ N DG+I +YKARLVAKGFHQ A D+ ET+SPVVKP +D+NNAFL+G L E FM QP
Subjt: WDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPF
Query: GFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHL
GF + P VCKL K+LYGLKQA RA F++L Q L
Subjt: GFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHL
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| A0A438HTD6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-06 | 47.89 | Show/hide |
Query: TASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT-FHLLPLPEIPLLAK
T +++ QDN WYPD GAT+HLT N NNL S++ + + VGNG SL I H G+T F L +P L K
Subjt: TASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT-FHLLPLPEIPLLAK
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| A0A438HTD6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-55 | 32.92 | Show/hide |
Query: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG-----------------------------------YTF
P Q A+ + W D GA++H+T + NNL++ + Y G + + +G+GT L ISH G Y +
Subjt: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG-----------------------------------YTF
Query: HLLPLPEIPLLA-----KFFSNDHSMMG----CTGLASLQAISPLCQASPTR--------------ATSTLNVCFLNLDD-----SFATAVYLINRLPTT
L P+LA SN H +G SL IS T T + +L + +FATAVYLINRLPTT
Subjt: HLLPLPEIPLLA-----KFFSNDHSMMG----CTGLASLQAISPLCQASPTR--------------ATSTLNVCFLNLDD-----SFATAVYLINRLPTT
Query: ALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP-------------------STTSHVTQHFPLL-SQSPSHILPSTLP--------
LN P +FH PNY LK FGC CYP L PY ++KL RS P ++ +V+ H + S P L +TLP
Subjt: ALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTP-------------------STTSHVTQHFPLL-SQSPSHILPSTLP--------
Query: ---------NTSPSS-----------------------PLAPAPLASPTASDSIDIQSPASAEDRLPV--------------SLTVLSTKHSVPMNAP-H
+T PSS P AP P + +A S + E +PV ++T K ++ + P
Subjt: ---------NTSPSS-----------------------PLAPAPLASPTASDSIDIQSPASAEDRLPV--------------SLTVLSTKHSVPMNAP-H
Query: DETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP--------
T P + +A+K +W+QAM EYDAL+ N TW+LV +V CKW+F+I RNSDGSI RYKARLVAKGFHQ +DY ET+SPVVKP
Subjt: DETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVKP--------
Query: -----------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYT
+D+NNAFL G L E FM QP GF P VCKL KA+YGLKQA RA + L Q L T
Subjt: -----------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYT
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| A0A5D3D5W0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-58 | 40.85 | Show/hide |
Query: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPST-----TSH-------------VTQH-------FPL
D++F+T+VYLIN LPT L+ + PL +F +PN+ FL+ FGC CYP L PY S+KL+ RSTP T TSH +++H FP
Subjt: DDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPST-----TSH-------------VTQH-------FPL
Query: LS--------------QSPSH-ILPSTL--------------PNTSPSSPLAPAPLASPTASDSID-------IQSPASAE-------------DRLPVS
S P H I+PS+L NT +P PL + T S D QSP+ E +
Subjt: LS--------------QSPSH-ILPSTL--------------PNTSPSSPLAPAPLASPTASDSID-------IQSPASAE-------------DRLPVS
Query: LTVLSTKHSV----PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADI
+ +KH + + +TE NA+EA +PHWK+AM+ E+ AL N TW L+ + +QKIV CKWVFKI RNS GSI+RYKARLVAKGFHQ+ +I
Subjt: LTVLSTKHSV----PMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADI
Query: DYTETYSPVVKPV-------------------DINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
DY ET+SPVVKP+ D+NNAFLHG L E +MEQPFGFE + P+VC+L+KALYGLKQA
Subjt: DYTETYSPVVKPV-------------------DINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQA
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| A5BRC3 Integrase catalytic domain-containing protein | 9.1e-56 | 43.23 | Show/hide |
Query: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHILPSTLPNTSPSSPLAPAP
++FATAVYLINR+PT LN + P +F T PNY LK FGC CYP L PY+S+KL+ S PSTT P H
Subjt: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHILPSTLPNTSPSSPLAPAP
Query: LASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSD
T + + +Q+ A R P+ L + S P+ + EP +A+K P W++AM EYDAL+ N TW+LV S+ Q +V CKW+F+ RNSD
Subjt: LASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSD
Query: GSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
GSI R+KARLVAKGFHQ DIDY +T+SPVVKP +D+NN FL G L E +M QP GF +P VCKL+KA+YGLKQA R
Subjt: GSITRYKARLVAKGFHQSADIDYTETYSPVVKP-------------------VDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
Query: ASFDRLSQHL
A + L L
Subjt: ASFDRLSQHL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.1e-21 | 31.47 | Show/hide |
Query: LSQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHS---VPMNAPHDETEPPNAREAIKY----PHWKQAMQLEYD
L++S P+ + + L + +PT +D I+I + S + ++ +S V +NA + PN+ + I+Y W++A+ E +
Subjt: LSQSPSHILPSTLPNTSPSSPLAPAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHS---VPMNAPHDETEPPNAREAIKY----PHWKQAMQLEYD
Query: ALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPV-------------------VKPVDINNAFLHGILPET
A N+TW + ++ IV +WVF + N G+ RYKARLVA+GF Q IDY ET++PV V +D+ AFL+G L E
Subjt: ALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPV-------------------VKPVDINNAFLHGILPET
Query: AFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
+M P G VCKL KA+YGLKQA R F+ Q L + V S
Subjt: AFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.3e-26 | 28.93 | Show/hide |
Query: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCY----------------PCLC--------------PYNSNKLNFRSTPSTTSHVTQ
++ TA YLINR P+ L P + + +Y LK FGC + PC+ P + R S V
Subjt: DSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCY----------------PCLC--------------PYNSNKLNFRSTPSTTSHVTQ
Query: HFPLLSQSPSHILPS--TLPNTSPSSPLAPAPLASPTASDSI----------------------DIQSPASAED-----RLPVSLTVLSTKH-SVPMNAP
+ + + I+P+ T+P+TS + P ++ + +D + +++ P E+ R V S ++ S
Subjt: HFPLLSQSPSHILPS--TLPNTSPSSPLAPAPLASPTASDSI----------------------DIQSPASAED-----RLPVSLTVLSTKH-SVPMNAP
Query: HDETEPPNAREAIKYPHWKQ---AMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-----
D+ EP + +E + +P Q AMQ E ++L N T+ LV ++ + CKWVFK+ ++ D + RYKARLV KGF Q ID+ E +SPVVK
Subjt: HDETEPPNAREAIKYPHWKQ---AMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-----
Query: --------------PVDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
+D+ AFLHG L E +MEQP GFE +VCKL K+LYGLKQA R
Subjt: --------------PVDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.7e-19 | 47.41 | Show/hide |
Query: RLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSAD
R + L+ K+S+ + + EP + A+K P W QAMQ E DAL N TW LV +Q I+ CKWVFK +SDG++ R KARLVAKGFHQ
Subjt: RLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSAD
Query: IDYTETYSPVVKPVDI
I + ETYSPVV+ I
Subjt: IDYTETYSPVVKPVDI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-36 | 35.19 | Show/hide |
Query: ASPTRATSTLNVCFLNLDDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHI
+SP+ V NLD SF+++ NG P T TQ H + P N + + ST + + S SPS
Subjt: ASPTRATSTLNVCFLNLDDSFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRSTPSTTSHVTQHFPLLSQSPSHI
Query: LPSTLPNTSPSSPL----APAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLV
++ +TSP+ P P PLA +++ + S R + + K+S+ ++ E+EP A +A+K W+ AM E +A I NHTWDLV
Subjt: LPSTLPNTSPSSPL----APAPLASPTASDSIDIQSPASAEDRLPVSLTVLSTKHSVPMNAPHDETEPPNAREAIKYPHWKQAMQLEYDALIANHTWDLV
Query: -HSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-------------------PVDINNAFLHGILPETAFMEQPFGFE
SH IV C+W+F NSDGS+ RYKARLVAKG++Q +DY ET+SPV+K +D+NNAFL G L + +M QP GF
Subjt: -HSSSHQKIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-------------------PVDINNAFLHGILPETAFMEQPFGFE
Query: WHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
P VCKLRKALYGLKQA RA + L +L T V S
Subjt: WHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-05 | 39.06 | Show/hide |
Query: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT
P Q L N W D GAT+H+T +FNNL++ Y GG+ + V +G+++ ISH G T
Subjt: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCGYT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.9e-38 | 30.56 | Show/hide |
Query: SFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRS-------------------TPSTTSHVTQH-------FPLL
+F+ AVYLINRLPT L P LF PNY LK FGC CYP L PYN +KL +S P+ + ++H FP
Subjt: SFATAVYLINRLPTTALNGVCPLTSLFHTQPNYHFLKTFGCCCYPCLCPYNSNKLNFRS-------------------TPSTTSHVTQH-------FPLL
Query: SQS-----------------PSH-ILPST---LP---------NTSPSSPLAPAPLASPTASD----SIDIQSPASAEDRLPV-----------------
+ + PSH LP+T LP +TSP P +P+PL + S S I SP+S+E P
Subjt: SQS-----------------PSH-ILPST---LP---------NTSPSSPLAPAPLASPTASD----SIDIQSPASAEDRLPV-----------------
Query: -----------------SLTVLSTKHSVPMNAPHDET---------------------------------------------------------------
S S P+++PH T
Subjt: -----------------SLTVLSTKHSVPMNAPHDET---------------------------------------------------------------
Query: ------EPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQ-KIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-----
EP A +A+K W+QAM E +A I NHTWDLV IV C+W+F NSDGS+ RYKARLVAKG++Q +DY ET+SPV+K
Subjt: ------EPPNAREAIKYPHWKQAMQLEYDALIANHTWDLVHSSSHQ-KIVVCKWVFKITRNSDGSITRYKARLVAKGFHQSADIDYTETYSPVVK-----
Query: --------------PVDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
+D+NNAFL G L + +M QP GF P VC+LRKA+YGLKQA RA + L +L T V S
Subjt: --------------PVDINNAFLHGILPETAFMEQPFGFEWHLTPPLVCKLRKALYGLKQAQRASFDRLSQHLYTKKVVES
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-04 | 35.48 | Show/hide |
Query: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG
P Q L + N W D GAT+H+T +FNNL+ Y GG+ + + +G+++ I+H G
Subjt: PTQMTTMLTASDLNQDNGWYPDFGATNHLTINFNNLAVSSEYLGGNLMQVGNGTSLTISHCG
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