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Lag0039288 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039288
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr2:40790401..40791849
RNA-Seq ExpressionLag0039288
SyntenyLag0039288
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]1.3e-3265.42Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG ++LK S  PLVGFGGERV PEG IE PVTFG G  +VTKM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]6.6e-3261.68Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG E+LK SLTPL+GFGGER+ P+G IELP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]4.3e-3164.49Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG   LK S  PLVGFGGE V PEG IELPVTFG G  ++TKM++FLVVD  S+ NAILGRPT+H +KAI S YHQ +KFPTP G+G +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+ ++K
Subjt:  CYWTALK

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]1.9e-3165.09Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG+E LK SLTPL+GFGGERV P G IELPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +KAI STYHQ +KFPTP GVG +KGEQ+  RE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTAL
        CY+T +
Subjt:  CYWTAL

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.5e-3166.36Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG ++LK S  PLVGFGGERV  EG IELPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY T+++
Subjt:  CYWTALK

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141476.5e-3365.42Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG ++LK S  PLVGFGGERV PEG IE PVTFG G  +VTKM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

A0A6J1CZ14 uncharacterized protein LOC1110159013.2e-3261.68Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG E+LK SLTPL+GFGGER+ P+G IELP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

A0A6J1DAK4 uncharacterized protein LOC1110189022.1e-3164.49Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG   LK S  PLVGFGGE V PEG IELPVTFG G  ++TKM++FLVVD  S+ NAILGRPT+H +KAI S YHQ +KFPTP G+G +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY+ ++K
Subjt:  CYWTALK

A0A6J1DKR9 uncharacterized protein LOC1110214389.3e-3265.09Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG+E LK SLTPL+GFGGERV P G IELPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +KAI STYHQ +KFPTP GVG +KGEQ+  RE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTAL
        CY+T +
Subjt:  CYWTAL

A0A6J1DQY2 uncharacterized protein LOC1110223217.1e-3266.36Show/hide
Query:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE
        M LG ++LK S  PLVGFGGERV  EG IELPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+ SRE
Subjt:  MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRE

Query:  CYWTALK
        CY T+++
Subjt:  CYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGGGA
TGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGACCAACCTTGCATGAGATGAAGGCCATAGCTT
CAACTTACCATCAGTTACTGAAGTTTCCAACTCCGAACGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGGAATCGAGGGAGTGTTACTGGACCGCACTAAAAGCTGTCAAG
CCACAGAGGGCCGAGGCCGACCAGAGAATGAGCCGAGGCCGAGCAACACACACTTCCACCAATACTGAATCTGAACTTATGGATTTCGCCATTAAAGTTCAGTATTCAGG
AGTGTGCACAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTGGACTATCGAGTCTACCTTGCCTCATCCAGAGTGAGACCATGGGAGCCTGGACCAACGAGTCTAC
CTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAAAGTGAGACCATGTGAGCCTGGACCGACGAGTCTAACT
CACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGCCTGGACCGACGAGTCTACCTCA
CATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAGAACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCAT
GTGAGCCTGGACCGACGAGTCTACCTCACATTCTCTGGCTTGAGCATCTTTACACTGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGT
GAGCCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACTAGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAATGAGACCATGTGA
GCCTGGACCAACGAGTCTACCTCACCTCCTCTGGCCTGAGCATCGTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAAAGTGAGACCATGTGAGC
CTGGACCAACGAGTCTACCTCACCTCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGGGA
TGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGACCAACCTTGCATGAGATGAAGGCCATAGCTT
CAACTTACCATCAGTTACTGAAGTTTCCAACTCCGAACGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGGAATCGAGGGAGTGTTACTGGACCGCACTAAAAGCTGTCAAG
CCACAGAGGGCCGAGGCCGACCAGAGAATGAGCCGAGGCCGAGCAACACACACTTCCACCAATACTGAATCTGAACTTATGGATTTCGCCATTAAAGTTCAGTATTCAGG
AGTGTGCACAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTGGACTATCGAGTCTACCTTGCCTCATCCAGAGTGAGACCATGGGAGCCTGGACCAACGAGTCTAC
CTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAAAGTGAGACCATGTGAGCCTGGACCGACGAGTCTAACT
CACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGCCTGGACCGACGAGTCTACCTCA
CATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAGAACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCAT
GTGAGCCTGGACCGACGAGTCTACCTCACATTCTCTGGCTTGAGCATCTTTACACTGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGT
GAGCCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACTAGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAATGAGACCATGTGA
GCCTGGACCAACGAGTCTACCTCACCTCCTCTGGCCTGAGCATCGTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAAAGTGAGACCATGTGAGC
CTGGACCAACGAGTCTACCTCACCTCACCTAA
Protein sequenceShow/hide protein sequence
MRLGRELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKESRECYWTALKAVK
PQRAEADQRMSRGRATHTSTNTESELMDFAIKVQYSGVCTRQPTQASRHASLDYRVYLASSRVRPWEPGPTSLPHILWLEHLYTGRAWTVEVYLASSKVRPCEPGPTSLT
HILWLEHLYTGRAWTVEVYLASSRVRPCEPGPTSLPHILWLEHLYTGRAWTAEVYLASSRTVEVYLASSRVRPCEPGPTSLPHILWLEHLYTGRAWTVEVYLASSRVRPC
EPGPTSLPHILWLEHLYTRRAWTVEVYLASSRMRPCEPGPTSLPHLLWPEHRYTGRAWTAEVYLASSKVRPCEPGPTSLPHLT