; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039300 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039300
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:40923862..40925310
RNA-Seq ExpressionLag0039300
SyntenyLag0039300
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]9.3e-3441.95Show/hide
Query:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF
        W+FTGFYGNP+AS R ESW LL R  + F  PWI GGDFNEI+   EK+GG  R+ S M +F+  +D C+L DLG+ G  FTW   +  G  ++ERLDR+
Subjt:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF

Query:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR
          N     L    KV +  +L+SDHR I   +  E+++R     KK+  + E  W K PE Q II ++W S+     +Q    +    C   L  WNK +
Subjt:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR

Query:  LQGSL
          GSL
Subjt:  LQGSL

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]9.3e-3441.95Show/hide
Query:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF
        W+FTGFYGNP+AS R ESW LL R  + F  PWI GGDFNEI+   EK+GG  R+ S M +F+  +D C+L DLG+ G  FTW   +  G  ++ERLDR+
Subjt:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF

Query:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR
          N     L    KV +  +L+SDHR I   +  E+++R     KK+  + E  W K PE Q II ++W S+     +Q    +    C   L  WNK +
Subjt:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR

Query:  LQGSL
          GSL
Subjt:  LQGSL

XP_017233198.1 PREDICTED: uncharacterized protein LOC108207248 [Daucus carota subsp. sativus]5.1e-3234.02Show/hide
Query:  GWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLD
        G W++TGFYG PE  +R ESW LLK+ +   + PW V GDFN+++   EK+GGR + ++ ++ F++T+ +C L D+G++G  FTW + +G G WI+ERLD
Subjt:  GWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLD

Query:  RFLVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQFKNKLKTCLQDLNTWNKG
        R L N +  ++  I++++      SDH  + +D+  +    + +  K E  W +  + + I++++W  + G+ +    +KL+ C   L  W  G
Subjt:  RFLVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQFKNKLKTCLQDLNTWNKG

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]8.4e-3540.47Show/hide
Query:  IKSSKGWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWI
        +K  +  W+FTG YG+     R E+WEL+ R    F  PWI+GGDFNEI+ + EK  G  R QS M +FK+T+D C L D G+ GD FTW  G      I
Subjt:  IKSSKGWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWI

Query:  RERLDRFLVNIELASLGKISKVQHHGYLDSDHRSISVD---IQFEDLTRKK--KAIKCEESWFKYPESQNIIKQAWNSIRGKDI--SQFKNKLKTCLQDL
         ERLDRFL+N  +  + +  +++H  +L SDHR I  +   +    + R+K  +  + EE WF + E + I+++ W +++G D+  + F+ K+ +CL++L
Subjt:  RERLDRFLVNIELASLGKISKVQHHGYLDSDHRSISVD---IQFEDLTRKK--KAIKCEESWFKYPESQNIIKQAWNSIRGKDI--SQFKNKLKTCLQDL

Query:  NTWNKGRLQGSLKGA
          WN GRL GSL+GA
Subjt:  NTWNKGRLQGSLKGA

XP_030969682.1 uncharacterized protein LOC115989960 [Quercus lobata]1.3e-3242.27Show/hide
Query:  GWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLD
        GWW  TGFYG+P  +KR ESW  LK        PW+V GDFNEI+   EKEGG +R +  M DF  TID+C L DLG+ G  FTW      G  IRERLD
Subjt:  GWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLD

Query:  RFLVNIELASLGKISKVQHHGYLDSDHRSISVDI-QFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDIS-QFKNKLKTCLQDLNTWN
        R L  +E  SL   +K+ H     SDH  +S+ + Q +   R KK  + E  W K    + ++K AW S +  +      N L+ C  DL++WN
Subjt:  RFLVNIELASLGKISKVQHHGYLDSDHRSISVDI-QFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDIS-QFKNKLKTCLQDLNTWN

TrEMBL top hitse value%identityAlignment
A0A2I4G1K2 uncharacterized protein LOC1090038935.5e-3237.31Show/hide
Query:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF
        W  TG YG+PEAS+R E+W +++         W++ GDFNEI+ + EK G R+R ++ M DF++ +D+C + DLG++G+ FTW  G+G    I E+LDRF
Subjt:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF

Query:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-KKKAIKCEESWFKYPESQNIIKQAWNSIRGK-DISQFKNKLKTCLQDLNTWNK
        L N+E  S   + +V H     SDH  I++  Q +     +KK  K E  W + P+ + +I+ AW    G+ D+    +K+K C + L+ WN+
Subjt:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-KKKAIKCEESWFKYPESQNIIKQAWNSIRGK-DISQFKNKLKTCLQDLNTWNK

A0A6J1DRA0 uncharacterized protein LOC1110224234.1e-3540.47Show/hide
Query:  IKSSKGWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWI
        +K  +  W+FTG YG+     R E+WEL+ R    F  PWI+GGDFNEI+ + EK  G  R QS M +FK+T+D C L D G+ GD FTW  G      I
Subjt:  IKSSKGWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWI

Query:  RERLDRFLVNIELASLGKISKVQHHGYLDSDHRSISVD---IQFEDLTRKK--KAIKCEESWFKYPESQNIIKQAWNSIRGKDI--SQFKNKLKTCLQDL
         ERLDRFL+N  +  + +  +++H  +L SDHR I  +   +    + R+K  +  + EE WF + E + I+++ W +++G D+  + F+ K+ +CL++L
Subjt:  RERLDRFLVNIELASLGKISKVQHHGYLDSDHRSISVD---IQFEDLTRKK--KAIKCEESWFKYPESQNIIKQAWNSIRGKDI--SQFKNKLKTCLQDL

Query:  NTWNKGRLQGSLKGA
          WN GRL GSL+GA
Subjt:  NTWNKGRLQGSLKGA

A0A7J6GGL8 CCHC-type domain-containing protein4.5e-3441.95Show/hide
Query:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF
        W+FTGFYGNP+AS R ESW LL R  + F  PWI GGDFNEI+   EK+GG  R+ S M +F+  +D C+L DLG+ G  FTW   +  G  ++ERLDR+
Subjt:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF

Query:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR
          N     L    KV +  +L+SDHR I   +  E+++R     KK+  + E  W K PE Q II ++W S+     +Q    +    C   L  WNK +
Subjt:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR

Query:  LQGSL
          GSL
Subjt:  LQGSL

A0A7J6GL46 CCHC-type domain-containing protein4.5e-3441.95Show/hide
Query:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF
        W+FTGFYGNP+AS R ESW LL R  + F  PWI GGDFNEI+   EK+GG  R+ S M +F+  +D C+L DLG+ G  FTW   +  G  ++ERLDR+
Subjt:  WKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDRF

Query:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR
          N     L    KV +  +L+SDHR I   +  E+++R     KK+  + E  W K PE Q II ++W S+     +Q    +    C   L  WNK +
Subjt:  LVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTR-----KKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQ--FKNKLKTCLQDLNTWNKGR

Query:  LQGSL
          GSL
Subjt:  LQGSL

A0A803QMV0 Uncharacterized protein3.8e-3338.73Show/hide
Query:  WWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDR
        WW+FTGFYG+P+ S+R +SW+LLKR S  + GPW VGGDFNEI+   EK GG  + +  +++F++ +D+C L D+GY G  +TW  G+ K   I ERLDR
Subjt:  WWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWIRERLDR

Query:  FLVNIELASLGKISKVQHHGYLDSDHRSISV-----DIQFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDIS---QFKNKLKTCLQDLNTWNK
           N+E   +    KV+H    +SDH  + +      ++  + TR +     E +W +  E  NI++  W   + K IS   + +N+L  C Q L  WNK
Subjt:  FLVNIELASLGKISKVQHHGYLDSDHRSISV-----DIQFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDIS---QFKNKLKTCLQDLNTWNK

Query:  GRLQ
         + Q
Subjt:  GRLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATTCCATTAGTTATGAGACGGTCACTGACAACAAAAAGGATATGAGTGAAATCATACAGATAAAAGAGGACGAAAAGAAGAGCACAGGGAAGTCGTGGAAGAG
AAGAGCCATAATAGGAAAAATAGTAGAGAGCGAAGCTAAAGAAAATGAACTACAGAAGAAGGAAGTCTCAAGAAAACTTGACAGGGAAGAACAAGAGGAGGAGGAAAAAG
CAAAGAGGACTCGAACAAACTATTTCGGCAATGCCATTGGGATATCGGCGGAGGCTGCGATGCAACCTCGCTGGACGCCATTAGGATCCTTTGTTGGAACGTTCGAGGGA
TGGGGAACCCTCGGACGATCTGGCACATCCATTAAGTCTAGTAAAGGGTGGTGGAAATTCACGGGGTTCTATGGAAATCCAGAAGCTTCTAAGCGTGGTGAGTCTTGGGA
GCTTCTAAAAAGAACTAGCGAGGGCTTCAAGGGTCCTTGGATAGTGGGTGGAGACTTTAACGAAATTATCAGAAGCGAGGAAAAAGAAGGGGGAAGGCTTAGAGCTCAAA
GCAACATGGATGACTTCAAAGAGACTATAGACAACTGTAATTTATTTGACTTGGGCTATTCGGGAGACAGTTTCACTTGGAGGAGGGGAAAAGGGAAGGGCCCCTGGATT
AGAGAAAGGCTAGATCGTTTCTTAGTTAACATTGAGTTGGCTTCTTTGGGGAAGATTTCTAAAGTTCAACACCATGGCTATCTAGACTCGGATCATAGAAGCATTTCAGT
TGACATTCAATTTGAAGACTTAACTAGGAAAAAGAAGGCCATCAAATGTGAGGAAAGCTGGTTCAAGTACCCAGAAAGCCAAAATATTATAAAACAAGCTTGGAATAGTA
TTAGAGGCAAAGACATATCGCAGTTCAAGAACAAGCTTAAGACTTGTTTACAAGACCTCAATACTTGGAACAAAGGCAGATTACAAGGTTCACTTAAAGGGGCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGACAGAAAGCAAC
AGGAATTCAGATAGTTAGAACAGGACGTGGAAGGGTATCCGGACCTAAGGCTGTTAAAGGCGGAAAAGGAGTTGGAAAATCTATTAGAAGAGGAAGAGATGTACTAGAAG
ATGAGATCGAGGGAAGATTGGCTTCAATGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATTCCATTAGTTATGAGACGGTCACTGACAACAAAAAGGATATGAGTGAAATCATACAGATAAAAGAGGACGAAAAGAAGAGCACAGGGAAGTCGTGGAAGAG
AAGAGCCATAATAGGAAAAATAGTAGAGAGCGAAGCTAAAGAAAATGAACTACAGAAGAAGGAAGTCTCAAGAAAACTTGACAGGGAAGAACAAGAGGAGGAGGAAAAAG
CAAAGAGGACTCGAACAAACTATTTCGGCAATGCCATTGGGATATCGGCGGAGGCTGCGATGCAACCTCGCTGGACGCCATTAGGATCCTTTGTTGGAACGTTCGAGGGA
TGGGGAACCCTCGGACGATCTGGCACATCCATTAAGTCTAGTAAAGGGTGGTGGAAATTCACGGGGTTCTATGGAAATCCAGAAGCTTCTAAGCGTGGTGAGTCTTGGGA
GCTTCTAAAAAGAACTAGCGAGGGCTTCAAGGGTCCTTGGATAGTGGGTGGAGACTTTAACGAAATTATCAGAAGCGAGGAAAAAGAAGGGGGAAGGCTTAGAGCTCAAA
GCAACATGGATGACTTCAAAGAGACTATAGACAACTGTAATTTATTTGACTTGGGCTATTCGGGAGACAGTTTCACTTGGAGGAGGGGAAAAGGGAAGGGCCCCTGGATT
AGAGAAAGGCTAGATCGTTTCTTAGTTAACATTGAGTTGGCTTCTTTGGGGAAGATTTCTAAAGTTCAACACCATGGCTATCTAGACTCGGATCATAGAAGCATTTCAGT
TGACATTCAATTTGAAGACTTAACTAGGAAAAAGAAGGCCATCAAATGTGAGGAAAGCTGGTTCAAGTACCCAGAAAGCCAAAATATTATAAAACAAGCTTGGAATAGTA
TTAGAGGCAAAGACATATCGCAGTTCAAGAACAAGCTTAAGACTTGTTTACAAGACCTCAATACTTGGAACAAAGGCAGATTACAAGGTTCACTTAAAGGGGCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGACAGAAAGCAAC
AGGAATTCAGATAGTTAGAACAGGACGTGGAAGGGTATCCGGACCTAAGGCTGTTAAAGGCGGAAAAGGAGTTGGAAAATCTATTAGAAGAGGAAGAGATGTACTAGAAG
ATGAGATCGAGGGAAGATTGGCTTCAATGGGGTGA
Protein sequenceShow/hide protein sequence
MTNSISYETVTDNKKDMSEIIQIKEDEKKSTGKSWKRRAIIGKIVESEAKENELQKKEVSRKLDREEQEEEEKAKRTRTNYFGNAIGISAEAAMQPRWTPLGSFVGTFEG
WGTLGRSGTSIKSSKGWWKFTGFYGNPEASKRGESWELLKRTSEGFKGPWIVGGDFNEIIRSEEKEGGRLRAQSNMDDFKETIDNCNLFDLGYSGDSFTWRRGKGKGPWI
RERLDRFLVNIELASLGKISKVQHHGYLDSDHRSISVDIQFEDLTRKKKAIKCEESWFKYPESQNIIKQAWNSIRGKDISQFKNKLKTCLQDLNTWNKGRLQGSLKGAXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRQKATGIQIVRTGRGRVSGPKAVKGGKGVGKSIRRGRDVLEDEIEGRLASMG