; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039302 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039302
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr2:41005824..41009375
RNA-Seq ExpressionLag0039302
SyntenyLag0039302
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156713.1 uncharacterized protein LOC111023558 [Momordica charantia]5.2e-4460.12Show/hide
Query:  MYFDRGLRLLWSDKNILNMLSCLNSLKILH-----------NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIEELLNIDYDGGDNENQDAH
        M FD GLRLLWSDKNIL+M +C+   KILH             E+ +D+EVI ETP+AI+E H SL+L DIC  SD  +HIEELLN+DYDG D++     
Subjt:  MYFDRGLRLLWSDKNILNMLSCLNSLKILH-----------NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIEELLNIDYDGGDNENQDAH

Query:  EGGGTSLNFENDGVSLNLEDEELCNSECESFGHLNSPIQSDDDSVEKSQHYVEFHPSMLKEKVEFTLG
        +  G  LN  + GV L+LE+EELCNSEC SF HLNSPIQSDDD VE SQ YVEFHPSMLK+ +EFTLG
Subjt:  EGGGTSLNFENDGVSLNLEDEELCNSECESFGHLNSPIQSDDDSVEKSQHYVEFHPSMLKEKVEFTLG

XP_030955586.1 uncharacterized protein LOC115977699 isoform X1 [Quercus lobata]7.8e-0830.98Show/hide
Query:  RMEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNA
        +M + +F   +HHGGQFV N   +YLGG+   V+N    D +S  EI+++  +V AL  ++ H+L+P    ++GLRL+  D +++ M      +      
Subjt:  RMEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNA

Query:  ENIVDIEVIEETPLAIEEGHKSLKLV----DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED
        + I       E PLA+E+   + ++     D+ ++  SD++VH + E  N+D +GGD    D  E G    +F++D V  N++D
Subjt:  ENIVDIEVIEETPLAIEEGHKSLKLV----DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED

XP_030959340.1 uncharacterized protein LOC115981327 [Quercus lobata]7.8e-0831.35Show/hide
Query:  MEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNAE
        M + +F   +HHGGQFV N   +YLGG+   V+N    D +S  EI+++  +V AL  ++ H+L+P    ++GLRL+  D N++ M      +      +
Subjt:  MEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNAE

Query:  NIVDIEVIEETPLAIEEGHKSLKLV------DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED
         I       E PLA+E+   + ++       D+ ++  SD++VH + E  N+D +GGD    D  E G    +F++D V  N++D
Subjt:  NIVDIEVIEETPLAIEEGHKSLKLV------DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED

XP_038721181.1 uncharacterized protein LOC120013448 [Tripterygium wilfordii]9.3e-0929.07Show/hide
Query:  MEECIFTMFLHHGGQFVNND---RTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILH
        M+   F M LHHGG+   N+   +  Y+GG V   ENC +SDM S+ EI   LREV         FL+P+  F+ GL+ + +D+++L+M+ C+     + 
Subjt:  MEECIFTMFLHHGGQFVNND---RTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILH

Query:  -NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIE----ELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLEDEELCNSECES------
           E+ V++ +  + P+   +    +  +D+ +++D+  ++E    E  N  Y+  D   Q   EGG      END      EDE +   + +S      
Subjt:  -NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIE----ELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLEDEELCNSECES------

Query:  -----FGHLNS-----PIQSDDDSVEK
               HL       PI SDD  VE+
Subjt:  -----FGHLNS-----PIQSDDDSVEK

XP_038721990.1 uncharacterized protein LOC120014141 [Tripterygium wilfordii]1.6e-0829.49Show/hide
Query:  LLFFQR-MEECIFTMFLHHGGQFVNND---RTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCL
        L +FQ+ M+   F M LHHGG+   N+   +  Y+GG V   ENC +SDM S+ EI   LREV         FL+P+  F+ GL+ + +D+++L+M+ C+
Subjt:  LLFFQR-MEECIFTMFLHHGGQFVNND---RTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCL

Query:  NSLKILH-NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIE----ELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLEDEELCNSECE
             +    E+ V++ +  + P+   +    +  +D+ +++D+  ++E    E  N  Y+  D   Q   EGG      END      EDE +   + +
Subjt:  NSLKILH-NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIE----ELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLEDEELCNSECE

Query:  S-----------FGHLNS-----PIQSDDDSVEK
        S             HL       PI SDD  VE+
Subjt:  S-----------FGHLNS-----PIQSDDDSVEK

TrEMBL top hitse value%identityAlignment
A0A2N9HU91 Uncharacterized protein7.4e-0425.15Show/hide
Query:  WATSHSVPRIRYKIKRNNRYLITIA---PSMEIVFPLIL-------FITFDIRVGSSLNLLLLLFFQRMEECIFTMFLHHGGQFVNNDRTLYLGGAVHEV
        W    +V      +++N  + I +    P + +++PL          I+     G++ NL+L L    M + +F+  +H GG FV     +Y GG +   
Subjt:  WATSHSVPRIRYKIKRNNRYLITIA---PSMEIVFPLIL-------FITFDIRVGSSLNLLLLLFFQRMEECIFTMFLHHGGQFVNNDRTLYLGGAVHEV

Query:  ENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKI
         N    D +S  E+E++ + V A +  K+++L+P    D GLR + +D ++L M       K+
Subjt:  ENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKI

A0A6J1DRD2 uncharacterized protein LOC1110235582.5e-4460.12Show/hide
Query:  MYFDRGLRLLWSDKNILNMLSCLNSLKILH-----------NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIEELLNIDYDGGDNENQDAH
        M FD GLRLLWSDKNIL+M +C+   KILH             E+ +D+EVI ETP+AI+E H SL+L DIC  SD  +HIEELLN+DYDG D++     
Subjt:  MYFDRGLRLLWSDKNILNMLSCLNSLKILH-----------NAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIEELLNIDYDGGDNENQDAH

Query:  EGGGTSLNFENDGVSLNLEDEELCNSECESFGHLNSPIQSDDDSVEKSQHYVEFHPSMLKEKVEFTLG
        +  G  LN  + GV L+LE+EELCNSEC SF HLNSPIQSDDD VE SQ YVEFHPSMLK+ +EFTLG
Subjt:  EGGGTSLNFENDGVSLNLEDEELCNSECESFGHLNSPIQSDDDSVEKSQHYVEFHPSMLKEKVEFTLG

A0A7N2RC18 SWIM-type domain-containing protein3.8e-0831.15Show/hide
Query:  MEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNAE
        M + +F   +HHGGQFV N   +YLGG+   V+N    D +S  EI+++  +V AL  ++ H+L+P    ++GLRL+  D +++ M      +      +
Subjt:  MEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENMLREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNAE

Query:  NIVDIEVIEETPLAIEEGHKSLKLV----DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED
         I       E PLA+E+   + ++     D+ ++  SD++VH + E  N+D +GGD+   D  E G    +F++D V  N++D
Subjt:  NIVDIEVIEETPLAIEEGHKSLKLV----DICDI--SDNNVH-IEELLNIDYDGGDNENQDAHEGGGTSLNFENDGVSLNLED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATTGGGCCACGTCACATAGTGTCCCCAGGATAAGGTACAAAATTAAGCGGAACAATCGGTATCTAATTACGATTGCACCATCAATGGAAATCGTATTCCCATT
GATATTGTTCATTACGTTTGATATTCGGGTGGGTTCTTCTTTGAATCTTCTTCTTCTTCTTTTTTTCCAGAGGATGGAGGAGTGTATATTCACAATGTTTTTACATCATG
GAGGTCAATTTGTTAATAATGATAGAACATTGTACTTAGGAGGGGCAGTACATGAAGTTGAGAATTGTAGTAGCTCTGATATGATATCCATGCTTGAAATTGAAAACATG
TTAAGGGAAGTAAATGCATTAGAGTGGAATAAGATACATTTTTTAGTTCCAGACATGTATTTTGATAGAGGATTAAGACTTTTATGGTCCGATAAGAATATCCTAAACAT
GTTAAGTTGCCTTAATTCTTTGAAAATACTACATAATGCAGAAAATATTGTGGATATTGAAGTAATTGAGGAGACACCTCTAGCCATAGAAGAGGGACATAAGAGCTTAA
AATTAGTTGACATTTGTGATATTAGTGACAACAATGTGCACATTGAAGAATTACTAAATATTGATTATGATGGAGGTGATAATGAGAACCAAGATGCACATGAGGGTGGT
GGTACAAGTTTGAACTTCGAGAATGATGGTGTGAGTTTGAACTTAGAAGATGAAGAATTATGTAATTCTGAATGTGAGTCTTTCGGTCACCTAAACTCACCAATTCAATC
TGACGATGACAGTGTTGAGAAATCACAACATTATGTTGAGTTTCACCCTTCTATGTTAAAGGAAAAGGTAGAGTTTACATTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATTGGGCCACGTCACATAGTGTCCCCAGGATAAGGTACAAAATTAAGCGGAACAATCGGTATCTAATTACGATTGCACCATCAATGGAAATCGTATTCCCATT
GATATTGTTCATTACGTTTGATATTCGGGTGGGTTCTTCTTTGAATCTTCTTCTTCTTCTTTTTTTCCAGAGGATGGAGGAGTGTATATTCACAATGTTTTTACATCATG
GAGGTCAATTTGTTAATAATGATAGAACATTGTACTTAGGAGGGGCAGTACATGAAGTTGAGAATTGTAGTAGCTCTGATATGATATCCATGCTTGAAATTGAAAACATG
TTAAGGGAAGTAAATGCATTAGAGTGGAATAAGATACATTTTTTAGTTCCAGACATGTATTTTGATAGAGGATTAAGACTTTTATGGTCCGATAAGAATATCCTAAACAT
GTTAAGTTGCCTTAATTCTTTGAAAATACTACATAATGCAGAAAATATTGTGGATATTGAAGTAATTGAGGAGACACCTCTAGCCATAGAAGAGGGACATAAGAGCTTAA
AATTAGTTGACATTTGTGATATTAGTGACAACAATGTGCACATTGAAGAATTACTAAATATTGATTATGATGGAGGTGATAATGAGAACCAAGATGCACATGAGGGTGGT
GGTACAAGTTTGAACTTCGAGAATGATGGTGTGAGTTTGAACTTAGAAGATGAAGAATTATGTAATTCTGAATGTGAGTCTTTCGGTCACCTAAACTCACCAATTCAATC
TGACGATGACAGTGTTGAGAAATCACAACATTATGTTGAGTTTCACCCTTCTATGTTAAAGGAAAAGGTAGAGTTTACATTGGGGTGA
Protein sequenceShow/hide protein sequence
MTNWATSHSVPRIRYKIKRNNRYLITIAPSMEIVFPLILFITFDIRVGSSLNLLLLLFFQRMEECIFTMFLHHGGQFVNNDRTLYLGGAVHEVENCSSSDMISMLEIENM
LREVNALEWNKIHFLVPDMYFDRGLRLLWSDKNILNMLSCLNSLKILHNAENIVDIEVIEETPLAIEEGHKSLKLVDICDISDNNVHIEELLNIDYDGGDNENQDAHEGG
GTSLNFENDGVSLNLEDEELCNSECESFGHLNSPIQSDDDSVEKSQHYVEFHPSMLKEKVEFTLG