; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039307 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039307
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioninactive poly [ADP-ribose] polymerase RCD1-like
Genome locationchr2:41067324..41072562
RNA-Seq ExpressionLag0039307
SyntenyLag0039307
Gene Ontology termsGO:0003950 - NAD+ ADP-ribosyltransferase activity (molecular function)
InterPro domainsIPR022003 - RST domain
IPR044964 - Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606273.1 Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. sororia]8.2e-4479.03Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLRDQ QLN SSIESEDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS LTSL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

XP_022931211.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita moschata]3.1e-4378.23Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLRDQ QLN SSIESEDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS L SL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

XP_022996125.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita maxima]2.4e-4378.23Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLR+Q QLN SSIESEDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS LTSL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

XP_023534562.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo]3.1e-4378.23Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLRDQ QLN SSIESEDCVSSPAPEKRCTEK DHGSS LK PKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS LTSL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

XP_023553913.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo]4.1e-4382.64Show/hide
Query:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR
        S P C      GL+DQ QLN SSIES EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRR
Subjt:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR

Query:  LRSIVGDPLLRSTLTSLQCNL
        LRSIVGDPLLRS LTSLQC L
Subjt:  LRSIVGDPLLRSTLTSLQCNL

TrEMBL top hitse value%identityAlignment
A0A6J1E4V0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X11.4e-4174.81Show/hide
Query:  STSLSRRLRQSLPSRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGL
        S  +S   ++ + +  N G+ T E L DQ QLN SSIES EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNG YGL
Subjt:  STSLSRRLRQSLPSRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGL

Query:  FREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCNL
        FREKKI+RDEFI RLRSIVGDPLLRSTLTSLQC +
Subjt:  FREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCNL

A0A6J1ET05 inactive poly [ADP-ribose] polymerase RCD1-like1.5e-4378.23Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLRDQ QLN SSIESEDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS L SL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

A0A6J1HJF2 inactive poly [ADP-ribose] polymerase RCD1-like isoform X12.0e-4382.64Show/hide
Query:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR
        S P C      GL+DQ QLN SSIES EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRR
Subjt:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR

Query:  LRSIVGDPLLRSTLTSLQCNL
        LRSIVGDPLLRS LTSLQC L
Subjt:  LRSIVGDPLLRSTLTSLQCNL

A0A6J1HW58 inactive poly [ADP-ribose] polymerase RCD1-like isoform X19.8e-4381.82Show/hide
Query:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR
        S P C      GL+DQ QLN SSIES EDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V G Y LFREKKI+RDEFIRR
Subjt:  SRPNCGVSTVEGLRDQWQLNYSSIES-EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRR

Query:  LRSIVGDPLLRSTLTSLQCNL
        LRSIVGDPLLRS LTSLQC L
Subjt:  LRSIVGDPLLRSTLTSLQCNL

A0A6J1K3U5 inactive poly [ADP-ribose] polymerase RCD1-like1.2e-4378.23Show/hide
Query:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF
        Q +P+  N G+ + +GLR+Q QLN SSIESEDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEF
Subjt:  QSLPSRPNCGVSTVEGLRDQWQLNYSSIESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEF

Query:  IRRLRSIVGDPLLRSTLTSLQCNL
        IRRLRSIVGDPLLRS LTSL C L
Subjt:  IRRLRSIVGDPLLRSTLTSLQCNL

SwissProt top hitse value%identityAlignment
O82289 Probable inactive poly [ADP-ribose] polymerase SRO12.1e-1048.1Show/hide
Query:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCNLG
        +  SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK++R EF + L  IVG D LL ST+T LQ +LG
Subjt:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCNLG

Q8RY59 Inactive poly [ADP-ribose] polymerase RCD17.5e-1661.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

Q9FJJ3 Probable inactive poly [ADP-ribose] polymerase SRO54.6e-0536.62Show/hide
Query:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL
        C + P + + S K  +SPWM F +L  A+SK +  + + ++   Y   + ++I R E I+R+RSI GD LL
Subjt:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL

Q9STU1 Probable inactive poly [ADP-ribose] polymerase SRO45.8e-0836.36Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++++I+R E I+RLRSI GD LL   + S+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL

Q9ZUD9 Probable inactive poly [ADP-ribose] polymerase SRO21.2e-0531.09Show/hide
Query:  RQSLPSRP--NCGVSTVEGLRDQ--WQLNYSS-IESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKK
        +QS PS    + GV  +   R+   W  N +S I     VS  +P  R +            P SPW+ F+ L + +S  +  + M L+   Y  FR++K
Subjt:  RQSLPSRP--NCGVSTVEGLRDQ--WQLNYSS-IESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKK

Query:  INRDEFIRRLRSIVGDPLL
        I RD+ +R++R + GD LL
Subjt:  INRDEFIRRLRSIVGDPLL

Arabidopsis top hitse value%identityAlignment
AT1G32230.1 WWE protein-protein interaction domain protein family5.4e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.2 WWE protein-protein interaction domain protein family5.4e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.3 WWE protein-protein interaction domain protein family5.4e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT2G35510.1 similar to RCD one 11.5e-1148.1Show/hide
Query:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCNLG
        +  SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK++R EF + L  IVG D LL ST+T LQ +LG
Subjt:  DHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCNLG

AT3G47720.1 similar to RCD one 44.1e-0936.36Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++++I+R E I+RLRSI GD LL   + S+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTAAAGCCCCCCTCTCACTTTCCCTCTCTCCCTCGATTTTCATTGTCTCCCGAAGCTCAAGTAGCATACGTCGAAGCTCGTGTCTCAGGTTGCGTACGTCGCCA
CCGAAGCTCTCGTCTCAGGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTCGAGCAAAAGCTTGTCGCCTCCCAT
CCACGTCGCTCAGCCGCCGTCTTCGTCAATCACTTCCTAGTCGGCCCAACTGTGGGGTTTCGACTGTTGAAGGGCTTCGGGACCAATGGCAATTGAATTACTCTTCGATT
GAATCAGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTC
AATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTTATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTA
GAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAATCTTGGATGCATGAATGATTTCAACAAGGCTCCCCCTTTTTTGTAT
GGAAATGTGAAGAACGTAGTGACAACGGGTCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTGTGTCACTGAACATCTTTTTCAGCGACATCGGGTCGGA
CGTTACTGAAAGTGATCTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTACTAAAGCCCCCCTCTCACTTTCCCTCTCTCCCTCGATTTTCATTGTCTCCCGAAGCTCAAGTAGCATACGTCGAAGCTCGTGTCTCAGGTTGCGTACGTCGCCA
CCGAAGCTCTCGTCTCAGGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTCGAGCAAAAGCTTGTCGCCTCCCAT
CCACGTCGCTCAGCCGCCGTCTTCGTCAATCACTTCCTAGTCGGCCCAACTGTGGGGTTTCGACTGTTGAAGGGCTTCGGGACCAATGGCAATTGAATTACTCTTCGATT
GAATCAGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTC
AATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTTATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTA
GAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAATCTTGGATGCATGAATGATTTCAACAAGGCTCCCCCTTTTTTGTAT
GGAAATGTGAAGAACGTAGTGACAACGGGTCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTGTGTCACTGAACATCTTTTTCAGCGACATCGGGTCGGA
CGTTACTGAAAGTGATCTTCAGTGA
Protein sequenceShow/hide protein sequence
MLLKPPSHFPSLPRFSLSPEAQVAYVEARVSGCVRRHRSSRLRSPTSPPNLAAEARVSAPFPSLPRAKACRLPSTSLSRRLRQSLPSRPNCGVSTVEGLRDQWQLNYSSI
ESEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCNLGCMNDFNKAPPFLY
GNVKNVVTTGRMLLKVYGFSDVLTVSLNIFFSDIGSDVTESDLQ