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Lag0039312 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039312
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:41125769..41126089
RNA-Seq ExpressionLag0039312
SyntenyLag0039312
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062178.1 gag protease polyprotein [Cucumis melo var. makuwa]5.9e-0948.24Show/hide
Query:  SVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE
        +VEQY+ EF  LSRFSP++V  EA +T+ FI GL+ D+Q  V AL PT +A ALR    + +  +   P A E E   GQKRK E
Subjt:  SVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE

KAG6579028.1 hypothetical protein SDJN03_23476, partial [Cucurbita argyrosperma subsp. sororia]7.7e-0943.4Show/hide
Query:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG
        E EFL L        K G  SVE Y+ +F RLSRF+PEMVDT++K   RF+ GL+  ++ +V     TDYA+A   A T      V T P   + E  +G
Subjt:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG

Query:  QKRKHE
        QKRKH+
Subjt:  QKRKHE

XP_022156662.1 uncharacterized protein LOC111023512 [Momordica charantia]2.6e-0955.38Show/hide
Query:  KSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFM
        K   +SVE+Y+ EFT+LSRF+PE+VDTEA K +RFI  LKD+ +  V  L P DYATALR    +
Subjt:  KSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFM

XP_023550797.1 uncharacterized protein LOC111808829 [Cucurbita pepo subsp. pepo]7.7e-0943.4Show/hide
Query:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG
        E EFL L        K G  SVE Y+ +F RLSRF+PEMVDT+AK   RF+ GL+  ++ +V     TDY++A   A T      V T P   + E  +G
Subjt:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG

Query:  QKRKHE
        QKRKH+
Subjt:  QKRKHE

XP_038880159.1 uncharacterized protein LOC120071839 [Benincasa hispida]1.5e-1247.42Show/hide
Query:  QGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE
        Q E    K G  +VE+YE +FTRLS F+P++V TEAK+ +RF+ GL+D+V+ +V AL P +YATA RA   +G P+      +   EP +GQKRK E
Subjt:  QGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE

TrEMBL top hitse value%identityAlignment
A0A5A7TG66 Gag protease polyprotein1.4e-0841.35Show/hide
Query:  KEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQK
        +EFL L Q        G+ +VEQY+ EF  LSRF+P+MV  EA +T++F+ GL+ D+Q +V AL P  +A ALR    + +P  + +  A       GQK
Subjt:  KEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQK

Query:  RKHE
        RK E
Subjt:  RKHE

A0A5A7V3K5 Gag protease polyprotein2.8e-0948.24Show/hide
Query:  SVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE
        +VEQY+ EF  LSRFSP++V  EA +T+ FI GL+ D+Q  V AL PT +A ALR    + +  +   P A E E   GQKRK E
Subjt:  SVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE

A0A5A7VQP7 Reverse transcriptase1.8e-0842.31Show/hide
Query:  EFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGM-PTVNTTPVAKESEPDAGQK
        EFL L Q        G+ +VEQY++EF  LSRF+PEM+ TEA +  +F+ GL+ D+Q +V A  P  +A ALR T  + +    N++ VA      +GQK
Subjt:  EFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGM-PTVNTTPVAKESEPDAGQK

Query:  RKHE
        RK E
Subjt:  RKHE

A0A6J1DSJ6 uncharacterized protein LOC1110235121.3e-0955.38Show/hide
Query:  KSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFM
        K   +SVE+Y+ EFT+LSRF+PE+VDTEA K +RFI  LKD+ +  V  L P DYATALR    +
Subjt:  KSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFM

A0A6J1FEV9 uncharacterized protein LOC1114450783.7e-0943.4Show/hide
Query:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG
        E EFL L        K G  SVE Y+ +F RLSRF+PEMVDT++K   RF+ GL+  ++ +V     TDYA+A   A T      V T P   + E  +G
Subjt:  EKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALR-ATTFMGMPTVNTTPVAKESEPDAG

Query:  QKRKHE
        QKRKH+
Subjt:  QKRKHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGAGTTCTTAACCTTGATGCAAGGAGAAAAGTCAGGAGAAAAGTCAGGAGAAAAGTCAGTAGAACAGTACGAACTGGAATTCACCCGATTATCCCGTTTCTC
CCCTGAAATGGTGGATACGGAAGCAAAGAAGACAAAGAGGTTCATCTCGGGCCTCAAAGATGACGTCCAGAAGGTTGTTGGAGCCCTTGGCCCAACGGACTACGCAACGG
CCCTTCGAGCGACCACCTTTATGGGCATGCCAACAGTCAATACAACTCCAGTAGCCAAGGAGTCGGAGCCCGACGCAGGACAGAAGAGGAAACACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGAGTTCTTAACCTTGATGCAAGGAGAAAAGTCAGGAGAAAAGTCAGGAGAAAAGTCAGTAGAACAGTACGAACTGGAATTCACCCGATTATCCCGTTTCTC
CCCTGAAATGGTGGATACGGAAGCAAAGAAGACAAAGAGGTTCATCTCGGGCCTCAAAGATGACGTCCAGAAGGTTGTTGGAGCCCTTGGCCCAACGGACTACGCAACGG
CCCTTCGAGCGACCACCTTTATGGGCATGCCAACAGTCAATACAACTCCAGTAGCCAAGGAGTCGGAGCCCGACGCAGGACAGAAGAGGAAACACGAGTAG
Protein sequenceShow/hide protein sequence
MEKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE