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Lag0039313 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039313
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag protease polyprotein
Genome locationchr2:41126250..41126574
RNA-Seq ExpressionLag0039313
SyntenyLag0039313
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053259.1 pol protein [Cucumis melo var. makuwa]6.6e-0748.53Show/hide
Query:  PVPPAPAQTVT--------LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        PVPPAP   +         L+ EA  L+DFKKY+P TF G   DPT A+ W + +E  FRYM CPE Q
Subjt:  PVPPAPAQTVT--------LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

TYJ97124.1 gag protease polyprotein [Cucumis melo var. makuwa]5.0e-0749.33Show/hide
Query:  EQDLAPPVP-PAPA------QTVT--LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        +Q  APP P PAPA      Q V+  L+ EA  L+DF+KY+P TF G   +PTEA+ W +++E  FRYM CPE Q
Subjt:  EQDLAPPVP-PAPA------QTVT--LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

XP_022928602.1 uncharacterized protein LOC111435460 [Cucurbita moschata]5.0e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

XP_022967882.1 uncharacterized protein LOC111467258 isoform X1 [Cucurbita maxima]8.6e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

XP_022967883.1 uncharacterized protein LOC111467258 isoform X2 [Cucurbita maxima]8.6e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

TrEMBL top hitse value%identityAlignment
A0A5A7UIF4 Reverse transcriptase3.2e-0748.53Show/hide
Query:  PVPPAPAQTVT--------LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        PVPPAP   +         L+ EA  L+DFKKY+P TF G   DPT A+ W + +E  FRYM CPE Q
Subjt:  PVPPAPAQTVT--------LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

A0A5D3BDN7 Gag protease polyprotein2.4e-0749.33Show/hide
Query:  EQDLAPPVP-PAPA------QTVT--LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        +Q  APP P PAPA      Q V+  L+ EA  L+DF+KY+P TF G   +PTEA+ W +++E  FRYM CPE Q
Subjt:  EQDLAPPVP-PAPA------QTVT--LTFEA--LQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

A0A6J1EKD9 uncharacterized protein LOC1114354602.4e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

A0A6J1HS13 uncharacterized protein LOC111467258 isoform X14.1e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

A0A6J1HWE2 uncharacterized protein LOC111467258 isoform X24.1e-0750Show/hide
Query:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ
        ++T  F+ L+DF+KYDPP F GK +DP   E+W  +IE  F +M CPE Q
Subjt:  TVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAGTATGACGAAGATCTCCCTGATGAGCAAGATCTTGCGCCGCCTGTACCTCCAGCACCGGCGCAGACTGTCACTTTGACTTTTGAGGCTCTTCAGGATTTTAA
GAAGTATGACCCACCGACGTTTTGCGGAAAGGCTGTGGATCCTACGGAGGCCGAAGCTTGGGCTGCCACAATTGAAAATTTTTTTCGCTATATGGGATGTCCTGAGGCTC
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCAGTATGACGAAGATCTCCCTGATGAGCAAGATCTTGCGCCGCCTGTACCTCCAGCACCGGCGCAGACTGTCACTTTGACTTTTGAGGCTCTTCAGGATTTTAA
GAAGTATGACCCACCGACGTTTTGCGGAAAGGCTGTGGATCCTACGGAGGCCGAAGCTTGGGCTGCCACAATTGAAAATTTTTTTCGCTATATGGGATGTCCTGAGGCTC
AATAG
Protein sequenceShow/hide protein sequence
MDQYDEDLPDEQDLAPPVPPAPAQTVTLTFEALQDFKKYDPPTFCGKAVDPTEAEAWAATIENFFRYMGCPEAQ