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Lag0039321 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039321
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:41359740..41360600
RNA-Seq ExpressionLag0039321
SyntenyLag0039321
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.4e-4254.17Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SE E VRA+KKE R+A   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+I 
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+ P  LV   PP FEL NW+IK+ L+VT+  QK     G+ +   DF VPI NLEQ++ E + ++S ELLRLI+QEEK+TM YQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

KAA0043020.1 uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]7.7e-4153.65Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KS  FQ+H GLG +NQGD  VI LPK+KE  GLGYKP ASEWE VRA+KKE R+    G E+K+  ++IPHL +TFK  E++ D NQ    N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSME-DDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+    LV   PP FEL NW+IK+ L VT+  QK     G+ +   DF VPI NLEQ++E  + ++S ELLRLI+QEEK+TM YQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSME-DDCNVSLELLRLIKQEEKETMPYQ

KAA0052108.1 uncharacterized protein E6C27_scaffold578G00960 [Cucumis melo var. makuwa]4.0e-3752.57Show/hide
Query:  NNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQSYNKA--SDISIVVVTEGTTAPRQLV
        +NQGD  VI L K+KE  GLGYKP ASEWE VR +KKE R+A   G+E+K+  ++IPHLS+TFK  E++ D +Q   +   S+ISIVVV+E T  P  LV
Subjt:  NNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQSYNKA--SDISIVVVTEGTTAPRQLV

Query:  RPFPPEFELKNWKIKEMLRVTREIQ---KGNGEGTFDFGVPIYNLEQSMED-DCNVSLELLRLIKQEEKETMPYQ
           PP FEL NW+IK+ L VT+      +G+ +   DF VPI NLEQ++E+ + ++S EL RLI+QEEK+TMPYQ
Subjt:  RPFPPEFELKNWKIKEMLRVTREIQ---KGNGEGTFDFGVPIYNLEQSMED-DCNVSLELLRLIKQEEKETMPYQ

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]5.2e-4554.59Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SEWE VRA+ KE R+A   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK---------GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+ P  LV   PP FEL NW+IK+ L+VT+  QK         G+ + T DF VPI NLEQ++ E + ++S ELLRLI+QEEK+TMPYQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK---------GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

TYK00092.1 protein NYNRIN-like [Cucumis melo var. makuwa]4.7e-4657.67Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SEWE VRA+KKE RNA   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQKGNG-EG-TFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E  + P  LV   PP FEL NW+IK+ L+VT+  QK    EG   DF VPIYNLEQ++ E + ++S ELLRLI+QEEK+TMPYQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQKGNG-EG-TFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase6.8e-4354.17Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SE E VRA+KKE R+A   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+I 
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+ P  LV   PP FEL NW+IK+ L+VT+  QK     G+ +   DF VPI NLEQ++ E + ++S ELLRLI+QEEK+TM YQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

A0A5A7TI68 Uncharacterized protein3.7e-4153.65Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KS  FQ+H GLG +NQGD  VI LPK+KE  GLGYKP ASEWE VRA+KKE R+    G E+K+  ++IPHL +TFK  E++ D NQ    N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSME-DDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+    LV   PP FEL NW+IK+ L VT+  QK     G+ +   DF VPI NLEQ++E  + ++S ELLRLI+QEEK+TM YQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK-----GNGEGTFDFGVPIYNLEQSME-DDCNVSLELLRLIKQEEKETMPYQ

A0A5A7UA36 Reverse transcriptase domain-containing protein1.9e-3752.57Show/hide
Query:  NNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQSYNKA--SDISIVVVTEGTTAPRQLV
        +NQGD  VI L K+KE  GLGYKP ASEWE VR +KKE R+A   G+E+K+  ++IPHLS+TFK  E++ D +Q   +   S+ISIVVV+E T  P  LV
Subjt:  NNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQSYNKA--SDISIVVVTEGTTAPRQLV

Query:  RPFPPEFELKNWKIKEMLRVTREIQ---KGNGEGTFDFGVPIYNLEQSMED-DCNVSLELLRLIKQEEKETMPYQ
           PP FEL NW+IK+ L VT+      +G+ +   DF VPI NLEQ++E+ + ++S EL RLI+QEEK+TMPYQ
Subjt:  RPFPPEFELKNWKIKEMLRVTREIQ---KGNGEGTFDFGVPIYNLEQSMED-DCNVSLELLRLIKQEEKETMPYQ

A0A5A7VAU5 Uncharacterized protein2.5e-4554.59Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SEWE VRA+ KE R+A   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK---------GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E T+ P  LV   PP FEL NW+IK+ L+VT+  QK         G+ + T DF VPI NLEQ++ E + ++S ELLRLI+QEEK+TMPYQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQK---------GNGEGTFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

A0A5D3BMZ2 Protein NYNRIN-like2.3e-4657.67Show/hide
Query:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS
        M+KSG FQ+H GLG +NQGD  VI LPK+KE  GLGYKP  SEWE VRA+KKE RNA   G E+K+  ++IPHLS+TFK GE++ D +Q   +N+ S+IS
Subjt:  MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQ--SYNKASDIS

Query:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQKGNG-EG-TFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ
        I VV+E  + P  LV   PP FEL NW+IK+ L+VT+  QK    EG   DF VPIYNLEQ++ E + ++S ELLRLI+QEEK+TMPYQ
Subjt:  IVVVTEGTTAPRQLVRPFPPEFELKNWKIKEMLRVTREIQKGNG-EG-TFDFGVPIYNLEQSM-EDDCNVSLELLRLIKQEEKETMPYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAAAGCGGTAATTTTCAAGTGCATGGAGGATTGGGACTTAATAATCAAGGAGATCCCAGTGTGATCTGTCTTCCCAAAAGCAAAGAGATACTTGGATTGGGATA
CAAGCCAACAGCTTCAGAATGGGAGACGGTCAGAGCAGAAAAGAAAGAAGTAAGGAATGCACGGCCCGAAGGGCAAGAAATCAAGCAAGGAAATATGAATATACCACATC
TATCTAAGACTTTCAAGAGAGGTGAAGTGATTCATGATGACAACCAATCCTACAACAAAGCTTCCGATATTTCAATCGTTGTTGTCACTGAAGGCACAACTGCGCCTCGA
CAACTGGTTCGTCCCTTTCCTCCAGAGTTCGAGTTGAAGAATTGGAAAATTAAAGAGATGCTGAGAGTCACTAGGGAGATACAAAAGGGCAATGGAGAGGGAACATTTGA
CTTTGGAGTCCCAATTTATAATCTCGAGCAAAGCATGGAAGATGATTGTAATGTGTCACTAGAATTGCTAAGGTTGATAAAGCAAGAGGAGAAAGAAACTATGCCATACC
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAAAGCGGTAATTTTCAAGTGCATGGAGGATTGGGACTTAATAATCAAGGAGATCCCAGTGTGATCTGTCTTCCCAAAAGCAAAGAGATACTTGGATTGGGATA
CAAGCCAACAGCTTCAGAATGGGAGACGGTCAGAGCAGAAAAGAAAGAAGTAAGGAATGCACGGCCCGAAGGGCAAGAAATCAAGCAAGGAAATATGAATATACCACATC
TATCTAAGACTTTCAAGAGAGGTGAAGTGATTCATGATGACAACCAATCCTACAACAAAGCTTCCGATATTTCAATCGTTGTTGTCACTGAAGGCACAACTGCGCCTCGA
CAACTGGTTCGTCCCTTTCCTCCAGAGTTCGAGTTGAAGAATTGGAAAATTAAAGAGATGCTGAGAGTCACTAGGGAGATACAAAAGGGCAATGGAGAGGGAACATTTGA
CTTTGGAGTCCCAATTTATAATCTCGAGCAAAGCATGGAAGATGATTGTAATGTGTCACTAGAATTGCTAAGGTTGATAAAGCAAGAGGAGAAAGAAACTATGCCATACC
AATAG
Protein sequenceShow/hide protein sequence
MLKSGNFQVHGGLGLNNQGDPSVICLPKSKEILGLGYKPTASEWETVRAEKKEVRNARPEGQEIKQGNMNIPHLSKTFKRGEVIHDDNQSYNKASDISIVVVTEGTTAPR
QLVRPFPPEFELKNWKIKEMLRVTREIQKGNGEGTFDFGVPIYNLEQSMEDDCNVSLELLRLIKQEEKETMPYQ