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Lag0039325 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039325
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr2:41445290..41447219
RNA-Seq ExpressionLag0039325
SyntenyLag0039325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.7e-3337.31Show/hide
Query:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG
        MFDLTP IEEY+ALIS+  + G K+Y +DR+LT++RSLSKF+ ++HAS +KK++K K  RNCIPI+YLI L R     +KGLSL+A+CIY  +IF R+KG
Subjt:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG

Query:  ----RAVRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGR--------------------
              V+  VG+  G  P        F RS  ++   +      N  R +LE  +   K+++  +W I + P +R +G                     
Subjt:  ----RAVRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGR--------------------

Query:  --CRLH----AFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS
          C L     ++ S ++N+     +E+ +  +K    R  EGTT  Y+NWRASRNG  ++
Subjt:  --CRLH----AFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.5e-3136.9Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LKCFTF+ FDLTP IEEYQALIS+  + G K+Y + R+LTLQRSLSKF+ ++HAS +KK+MKTK  RNCIPI+YLI L R     +KGLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKPT----PTTDPSV-----------FGRSVMISFGMLHETDRPNT-------RRSDLEGTMITFKAYNIS-----
        VIF R+KG      V+  VG+  G  P       T  S+           F  + M+   +      PN          S    T  T + +N +     
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKPT----PTTDPSV-----------FGRSVMISFGMLHETDRPNT-------RRSDLEGTMITFKAYNIS-----

Query:  ---------------------MWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS
                              W+  F P+V  L      ++ S ++N      +E+ +  +K    R  EGTT  Y+NWRASRNG  ++
Subjt:  ---------------------MWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.6e-3057.48Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LKCFTF+ FDLTP IEEYQALIS+  + G  +Y +DR+LTLQRSLSKF+ ++HAS +KK+MKTK  RNCIPI+YLI L R     + GLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKP
        VIF R+KG      V+  VG+  G  P
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKP

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]1.0e-2958.27Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LK FTF+ FDLTP IEEYQALIS+  + G K+Y +DR+LTLQRSLSKF+ ++HAS +KK MKTK  RNCIPI+YLI L R     +KGLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKP
        VIF R+KG      V+  VG+  G  P
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKP

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.4e-2653.78Show/hide
Query:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG
        MFDLTP IEEY+ALIS+  + G K+Y +DR+LT++RSLSKF+ ++HAS +KK++K K  RNCIPI+YLI L R     +KGLSL+A+CIY  +IF R+KG
Subjt:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG

Query:  ----RAVRRSVGVGFGRKP
              V+  VG+  G  P
Subjt:  ----RAVRRSVGVGFGRKP

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like1.3e-3337.31Show/hide
Query:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG
        MFDLTP IEEY+ALIS+  + G K+Y +DR+LT++RSLSKF+ ++HAS +KK++K K  RNCIPI+YLI L R     +KGLSL+A+CIY  +IF R+KG
Subjt:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG

Query:  ----RAVRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGR--------------------
              V+  VG+  G  P        F RS  ++   +      N  R +LE  +   K+++  +W I + P +R +G                     
Subjt:  ----RAVRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGR--------------------

Query:  --CRLH----AFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS
          C L     ++ S ++N+     +E+ +  +K    R  EGTT  Y+NWRASRNG  ++
Subjt:  --CRLH----AFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS

A0A5A7SUT0 Reverse transcriptase7.0e-3236.9Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LKCFTF+ FDLTP IEEYQALIS+  + G K+Y + R+LTLQRSLSKF+ ++HAS +KK+MKTK  RNCIPI+YLI L R     +KGLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKPT----PTTDPSV-----------FGRSVMISFGMLHETDRPNT-------RRSDLEGTMITFKAYNIS-----
        VIF R+KG      V+  VG+  G  P       T  S+           F  + M+   +      PN          S    T  T + +N +     
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKPT----PTTDPSV-----------FGRSVMISFGMLHETDRPNT-------RRSDLEGTMITFKAYNIS-----

Query:  ---------------------MWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS
                              W+  F P+V  L      ++ S ++N      +E+ +  +K    R  EGTT  Y+NWRASRNG  ++
Subjt:  ---------------------MWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEK----RTYEGTTMSYENWRASRNGFEVS

A0A5A7TXA1 Glial fibrillary acidic protein-like1.7e-3057.48Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LKCFTF+ FDLTP IEEYQALIS+  + G  +Y +DR+LTLQRSLSKF+ ++HAS +KK+MKTK  RNCIPI+YLI L R     + GLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKP
        VIF R+KG      V+  VG+  G  P
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKP

A0A5A7VHI3 Uncharacterized protein5.0e-3058.27Show/hide
Query:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM
        +LK FTF+ FDLTP IEEYQALIS+  + G K+Y +DR+LTLQRSLSKF+ ++HAS +KK MKTK  RNCIPI+YLI L R     +KGLSL+A+CIY  
Subjt:  MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDM

Query:  VIFLRVKG----RAVRRSVGVGFGRKP
        VIF R+KG      V+  VG+  G  P
Subjt:  VIFLRVKG----RAVRRSVGVGFGRKP

A0A5D3D0S2 Glial fibrillary acidic protein-like2.6e-2653.78Show/hide
Query:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG
        MFDLTP IEEY+ALIS+  + G K+Y +DR+LT++RSLSKF+ ++HAS +KK++K K  RNCIPI+YLI L R     +KGLSL+A+CIY  +IF R+KG
Subjt:  MFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKG

Query:  ----RAVRRSVGVGFGRKP
              V+  VG+  G  P
Subjt:  ----RAVRRSVGVGFGRKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGTGCTTTACATTCGACATGTTTGACTTAACCCCCATGATCGAGGAATACCAAGCATTAATCTCCATATCGTCCAACGCTGGAATCAAAGTGTATAAGTGGGA
TCGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGAAAATGTCCATGCATCCAACATAAAGAAGCGGATGAAGACCAAAGGAGAGAGGAATTGTATTCCTATCG
ATTATTTGATAGGCCTCACACGTTCGAGCCAGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGTATATACGACATGGTGATTTTTCTGAGGGTCAAAGGTAGGGCT
GTTCGCCGGTCGGTCGGAGTCGGTTTTGGACGAAAACCGACGCCGACAACCGACCCTTCGGTTTTCGGTCGTTCGGTGATGATTAGTTTTGGGATGCTTCATGAAACCGA
CCGACCAAATACACGAAGAAGTGATCTGGAGGGCACCATGATTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGGGA
GGTGTCGCTTACACGCCTTTATTAGCATTGTGTCAAATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACCTATGAGGGCACAACGATGTCA
TATGAGAATTGGAGAGCATCTCGAAATGGATTCGAGGTTTCATTGCACCAAAATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGTGCTTTACATTCGACATGTTTGACTTAACCCCCATGATCGAGGAATACCAAGCATTAATCTCCATATCGTCCAACGCTGGAATCAAAGTGTATAAGTGGGA
TCGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGAAAATGTCCATGCATCCAACATAAAGAAGCGGATGAAGACCAAAGGAGAGAGGAATTGTATTCCTATCG
ATTATTTGATAGGCCTCACACGTTCGAGCCAGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGTATATACGACATGGTGATTTTTCTGAGGGTCAAAGGTAGGGCT
GTTCGCCGGTCGGTCGGAGTCGGTTTTGGACGAAAACCGACGCCGACAACCGACCCTTCGGTTTTCGGTCGTTCGGTGATGATTAGTTTTGGGATGCTTCATGAAACCGA
CCGACCAAATACACGAAGAAGTGATCTGGAGGGCACCATGATTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGGGA
GGTGTCGCTTACACGCCTTTATTAGCATTGTGTCAAATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACCTATGAGGGCACAACGATGTCA
TATGAGAATTGGAGAGCATCTCGAAATGGATTCGAGGTTTCATTGCACCAAAATCAATAG
Protein sequenceShow/hide protein sequence
MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKGRA
VRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEKRTYEGTTMS
YENWRASRNGFEVSLHQNQ