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Lag0039337 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039337
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr2:41624534..41625010
RNA-Seq ExpressionLag0039337
SyntenyLag0039337
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.3e-1634.67Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+HL+PTTH  T+S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPLGPSR
         +      +E+      ID   + ++ Q       +  +S        SR
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPLGPSR

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-1537.5Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKLQQ
         +      +E+      ID   + ++ Q
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKLQQ

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]4.8e-1534.03Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S   V T + S L P + +W HFLK+ L+PTTH   +S  R++LLY ++ G  IN+G +I  EI AC  +++G  FF SLI ++C+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKL-QQNSIQRKDKASTSQAT
         +      +E+      ID   + ++ Q+   +   + S+S+ T
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKL-QQNSIQRKDKASTSQAT

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.6e-1541.28Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH   +S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEK
           +  +EK
Subjt:  VKIVSGKEK

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]7.4e-1634.39Show/hide
Query:  MKEALKLVANKGVQW-KESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLIT
        ++E  + +   G++W   S   ++T  +S+LKP + VW++F++  L PTTHDS+ISV +++LLYC++ G  IN+G ++   IL C ++R GK FF SLI 
Subjt:  MKEALKLVANKGVQW-KESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLIT

Query:  QLCKRVKI------VSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPL
        +L  +  +      +  KE E    K TID+  + KL++ S + ++    ++A   L
Subjt:  QLCKRVKI------VSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.1e-1634.67Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+HL+PTTH  T+S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPLGPSR
         +      +E+      ID   + ++ Q       +  +S        SR
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPLGPSR

A0A2P5B5S0 Uncharacterized protein3.0e-1540.18Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  GV+W  S       + S L P + VW HFLK+HL+PTTH   +S  R++LLY ++ G  IN+G +I  EI AC  +++   FF SLIT++C+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERH
         +     E++ H
Subjt:  VKIVSGKEKERH

A0A2P5BCG4 Uncharacterized protein (Fragment)8.0e-1637.5Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKLQQ
         +      +E+      ID   + ++ Q
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKLQQ

A0A2P5BNT0 Uncharacterized protein (Fragment)2.3e-1534.03Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S   V T + S L P + +W HFLK+ L+PTTH   +S  R++LLY ++ G  IN+G +I  EI AC  +++G  FF SLI ++C+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEKERHFFKPTIDLPLIGKL-QQNSIQRKDKASTSQAT
         +      +E+      ID   + ++ Q+   +   + S+S+ T
Subjt:  VKIVSGKEKERHFFKPTIDLPLIGKL-QQNSIQRKDKASTSQAT

A0A2P5DXM3 Uncharacterized protein8.0e-1641.28Show/hide
Query:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR
        L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH   +S  R++LL+ ++ G  IN+G +I  EI AC  ++ G  FF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKR

Query:  VKIVSGKEK
           +  +EK
Subjt:  VKIVSGKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAGCATTGAAGCTTGTGGCCAACAAGGGTGTTCAGTGGAAAGAGTCTCAGATGAAGGTGAAAACTCTAGTGTCAAGTGACTTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTTCTGAAGAACCATTTGATGCCAACAACCCACGACAGCACGATCTCAGTGGTTAGATTGATGCTACTCTATTGCATTATGAAGGGGTTGGTGATCAACATCG
GGAGCATAATTAGGGATGAAATTCTAGCCTGTGGAAGAAAACGAGCAGGTAAATTTTTTTTTGGATCACTCATCACCCAACTCTGTAAAAGGGTGAAGATAGTTTCAGGC
AAAGAAAAGGAGCGTCATTTCTTCAAGCCAACCATTGACCTGCCCTTGATCGGGAAGCTTCAACAGAATAGCATCCAGAGGAAAGATAAAGCCTCAACATCTCAGGCCAC
TCCACCATTAGGGCCGAGCAGGGATTCTCCATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAGCATTGAAGCTTGTGGCCAACAAGGGTGTTCAGTGGAAAGAGTCTCAGATGAAGGTGAAAACTCTAGTGTCAAGTGACTTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTTCTGAAGAACCATTTGATGCCAACAACCCACGACAGCACGATCTCAGTGGTTAGATTGATGCTACTCTATTGCATTATGAAGGGGTTGGTGATCAACATCG
GGAGCATAATTAGGGATGAAATTCTAGCCTGTGGAAGAAAACGAGCAGGTAAATTTTTTTTTGGATCACTCATCACCCAACTCTGTAAAAGGGTGAAGATAGTTTCAGGC
AAAGAAAAGGAGCGTCATTTCTTCAAGCCAACCATTGACCTGCCCTTGATCGGGAAGCTTCAACAGAATAGCATCCAGAGGAAAGATAAAGCCTCAACATCTCAGGCCAC
TCCACCATTAGGGCCGAGCAGGGATTCTCCATCCTAG
Protein sequenceShow/hide protein sequence
MKEALKLVANKGVQWKESQMKVKTLVSSDLKPESAVWLHFLKNHLMPTTHDSTISVVRLMLLYCIMKGLVINIGSIIRDEILACGRKRAGKFFFGSLITQLCKRVKIVSG
KEKERHFFKPTIDLPLIGKLQQNSIQRKDKASTSQATPPLGPSRDSPS