; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039338 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039338
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr2:41636704..41638208
RNA-Seq ExpressionLag0039338
SyntenyLag0039338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159119.1 uncharacterized protein LOC111025551 [Momordica charantia]2.1e-1049.4Show/hide
Query:  MNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE
        +  +  A+KNME Q+GQ+AS +  ++KGKFPSDTEVNPRE CK +TLRSG++L+     EKKK EE +   E+   + E   E
Subjt:  MNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE

XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]1.6e-1042.68Show/hide
Query:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE
        +++E K       + ++ + T  +N    +KN+E Q+GQ+A+ + A ++G FPS+TEVNP+EQCK ITLRSGR++E  P++E
Subjt:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]2.1e-1042.68Show/hide
Query:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE
        +++E K       + ++ + T  +N    +KN+E Q+GQ+A+ + A ++G FPS+TEVNP+EQCK ITLRSGR++E  P++E
Subjt:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE

XP_030923419.1 uncharacterized protein LOC115950351 [Quercus lobata]3.6e-1042.68Show/hide
Query:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE
        +++E K       + ++ + T  +N    +KN+E Q+GQ+A+ + A ++G FPS+T+VNP+EQCKVITLRSGR++E  P++E
Subjt:  WLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE

XP_035539656.1 uncharacterized protein LOC118344026 [Juglans regia]1.6e-1052.24Show/hide
Query:  VNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE
        ++ + T  +N   A+KN+E Q+GQ+A+ + A ++G FPS+TEVNPREQCK ITLRSGR+L+  P+ E
Subjt:  VNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE

TrEMBL top hitse value%identityAlignment
A0A2P5BPI6 Uncharacterized protein7.4e-0943.75Show/hide
Query:  QTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLE
        +  ++ + T  NN +  +K++E Q+GQ+A+++K  + GKFPSDTE NP++ CK ITLR+G+++E
Subjt:  QTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLE

A0A438FGD7 Uncharacterized protein1.3e-0851.79Show/hide
Query:  LKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKK
        +KN+E Q+GQ+A+ + A ++G FPS+ E+NP+EQCK ITLR+GR++E  P++E +K
Subjt:  LKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKK

A0A6J1DU19 uncharacterized protein LOC1110243612.5e-0941.49Show/hide
Query:  LQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE
        ++  V  +   +  +  ++KNME Q+GQIA  +  ++KGKFPSD EV PRE CK +TLRSG++L+     EKKK EE +   E+   + E   E
Subjt:  LQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE

A0A6J1E1F6 uncharacterized protein LOC1110255511.0e-1049.4Show/hide
Query:  MNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE
        +  +  A+KNME Q+GQ+AS +  ++KGKFPSDTEVNPRE CK +TLRSG++L+     EKKK EE +   E+   + E   E
Subjt:  MNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSE

A0A6P9DWY0 uncharacterized protein LOC1183440267.9e-1152.24Show/hide
Query:  VNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE
        ++ + T  +N   A+KN+E Q+GQ+A+ + A ++G FPS+TEVNPREQCK ITLRSGR+L+  P+ E
Subjt:  VNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQCKVITLRSGRQLENRPNEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAGTTTGCTCCCAGTTTTGCTGCAGCACAGAATTTGCTCCCTCAAGTCGCCCAACAACAGATTCTGGACAAAGGCATAAAACCCAACAACAAGGAGATGCTTAG
GAGATGCCCAAAGCATGGCTACCCGGATTGGCTCCAGGAGCAAAAAGTGCTAAATGTTAATCTCCAAACGACGGTGAATACCTTGGTGACATCAATGAACAACCACGACA
TCGCTCTTAAAAATATGGAATTTCAAGTGGGACAAATTGCTTCAGCAGTGAAAGCCCTTAAAAAGGGTAAGTTTCCTAGTGATACAGAGGTGAACCCCAGAGAGCAATGT
AAGGTAATCACACTCCGAAGTGGGAGACAATTGGAGAACCGCCCGAATGAAGAGAAGAAAAAGAAGGAAGAAAGAATAAGCATGGATGAAGACGGCAGGGCTGAGGCAGA
AAAAACCTCTGAAGAAAGGTTTCAAATCCTCCTTGCTCAGTTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCAGTTTGCTCCCAGTTTTGCTGCAGCACAGAATTTGCTCCCTCAAGTCGCCCAACAACAGATTCTGGACAAAGGCATAAAACCCAACAACAAGGAGATGCTTAG
GAGATGCCCAAAGCATGGCTACCCGGATTGGCTCCAGGAGCAAAAAGTGCTAAATGTTAATCTCCAAACGACGGTGAATACCTTGGTGACATCAATGAACAACCACGACA
TCGCTCTTAAAAATATGGAATTTCAAGTGGGACAAATTGCTTCAGCAGTGAAAGCCCTTAAAAAGGGTAAGTTTCCTAGTGATACAGAGGTGAACCCCAGAGAGCAATGT
AAGGTAATCACACTCCGAAGTGGGAGACAATTGGAGAACCGCCCGAATGAAGAGAAGAAAAAGAAGGAAGAAAGAATAAGCATGGATGAAGACGGCAGGGCTGAGGCAGA
AAAAACCTCTGAAGAAAGGTTTCAAATCCTCCTTGCTCAGTTGAATTAA
Protein sequenceShow/hide protein sequence
MWQFAPSFAAAQNLLPQVAQQQILDKGIKPNNKEMLRRCPKHGYPDWLQEQKVLNVNLQTTVNTLVTSMNNHDIALKNMEFQVGQIASAVKALKKGKFPSDTEVNPREQC
KVITLRSGRQLENRPNEEKKKKEERISMDEDGRAEAEKTSEERFQILLAQLN