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Lag0039343 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039343
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag protease polyprotein
Genome locationchr2:41766396..41767069
RNA-Seq ExpressionLag0039343
SyntenyLag0039343
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155872.1 uncharacterized protein LOC111022885 [Momordica charantia]2.5e-0650Show/hide
Query:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E++ D+ E EF+ L QGT+T+ QY R+F ELS    EL+  EA +I RF+ GLR  IRG V L +  TYA
Subjt:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]1.1e-0651.43Show/hide
Query:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E++ D+ EVEF+ LVQGT+T+ QY R+F ELS    EL+  EA +I RF+ GL   IRG V L +  TYA
Subjt:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
XP_022156992.1 uncharacterized protein LOC111023821 [Momordica charantia]3.3e-0631.3Show/hide
Query:  MSCLYAQWSCSQLVECSGSTLESLVDLEVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQV
        +  LY    CS   +  G+  E       EF+ L QG++T+ QY R+F ELS    + + IE  +ID+FI+GL  EI+GL+ L +  TYA    ++   +
Subjt:  MSCLYAQWSCSQLVECSGSTLESLVDLEVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQV

Query:  IKPESLCQEPSEFIVKEAKITKSSMVPFGSS
        +  + L +  S+ ++  +   K     F SS
Subjt:  IKPESLCQEPSEFIVKEAKITKSSMVPFGSS
XP_022159077.1 uncharacterized protein LOC111025517 [Momordica charantia]1.5e-0650.79Show/hide
Query:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E EF+    GT+T+ QY R+F ELSC   EL+  EA +I RF+ GLR  IRG V L +  TYA
Subjt:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
XP_038880159.1 uncharacterized protein LOC120071839 [Benincasa hispida]8.7e-0746.88Show/hide
Query:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYAT
        + EF+ L QGTMT+ +Y  +F  LSC   +LV  EA R +RF+ GLR E+RG+V+  +   YAT
Subjt:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYAT
TrEMBL top hitse value%identityAlignment
A0A6J1DQJ4 uncharacterized protein LOC1110228851.2e-0650Show/hide
Query:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E++ D+ E EF+ L QGT+T+ QY R+F ELS    EL+  EA +I RF+ GLR  IRG V L +  TYA
Subjt:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
A0A6J1DR22 uncharacterized protein LOC1110230351.6e-0633.96Show/hide
Query:  EFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQVIKPESLCQEPSEFIVKEAKITKSSMVPFG
        EF+ L QG++T+ QY R+F ELS    + +  E  +ID+FI+GLR EI+GL+ L +S TYA    ++   ++  + L +  S+ ++  +   K     F 
Subjt:  EFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQVIKPESLCQEPSEFIVKEAKITKSSMVPFG

Query:  SSSKNV
        SS  ++
Subjt:  SSSKNV
A0A6J1DTE5 uncharacterized protein LOC1110238211.6e-0631.3Show/hide
Query:  MSCLYAQWSCSQLVECSGSTLESLVDLEVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQV
        +  LY    CS   +  G+  E       EF+ L QG++T+ QY R+F ELS    + + IE  +ID+FI+GL  EI+GL+ L +  TYA    ++   +
Subjt:  MSCLYAQWSCSQLVECSGSTLESLVDLEVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQV

Query:  IKPESLCQEPSEFIVKEAKITKSSMVPFGSS
        +  + L +  S+ ++  +   K     F SS
Subjt:  IKPESLCQEPSEFIVKEAKITKSSMVPFGSS
A0A6J1DVA0 uncharacterized protein LOC1110234245.5e-0751.43Show/hide
Query:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E++ D+ EVEF+ LVQGT+T+ QY R+F ELS    EL+  EA +I RF+ GL   IRG V L +  TYA
Subjt:  ESLVDL-EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
A0A6J1DYU5 uncharacterized protein LOC1110255177.2e-0750.79Show/hide
Query:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
        E EF+    GT+T+ QY R+F ELSC   EL+  EA +I RF+ GLR  IRG V L +  TYA
Subjt:  EVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGTCTCTATGCTCAGTGGTCATGCTCGCAACTGGTGGAATGTAGTGGGTCAACCTTGGAATCACTCGTTGATCTGGAAGTAGAGTTCGTCTTGCTCGTGCAAGG
GACCATGACTATGACACAGTATGGTAGAAGATTTGAGGAGCTGTCTTGTCGTGTCTCTGAGCTGGTCGACATTGAGGCAAGTAGGATCGACCGATTCATCAATGGCTTGC
GTCCAGAAATCAGAGGGTTGGTCAGGCTGGGACAATCAGGCACTTACGCAACAAATCTTGTGAGCATCCTGCACCAAGTCATCAAGCCAGAAAGTCTCTGCCAGGAGCCT
AGTGAGTTCATTGTAAAGGAAGCCAAGATCACGAAGAGTTCAATGGTTCCCTTTGGAAGCAGTTCAAAGAATGTCCGACAAGAGGAGTTGATGCCTTGGATCACTAATGA
CGAACTCAAGGCGGAGTATCCAGAGCTTTATGACAATGACGAATCTAATGAAGAGGATAGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGTCTCTATGCTCAGTGGTCATGCTCGCAACTGGTGGAATGTAGTGGGTCAACCTTGGAATCACTCGTTGATCTGGAAGTAGAGTTCGTCTTGCTCGTGCAAGG
GACCATGACTATGACACAGTATGGTAGAAGATTTGAGGAGCTGTCTTGTCGTGTCTCTGAGCTGGTCGACATTGAGGCAAGTAGGATCGACCGATTCATCAATGGCTTGC
GTCCAGAAATCAGAGGGTTGGTCAGGCTGGGACAATCAGGCACTTACGCAACAAATCTTGTGAGCATCCTGCACCAAGTCATCAAGCCAGAAAGTCTCTGCCAGGAGCCT
AGTGAGTTCATTGTAAAGGAAGCCAAGATCACGAAGAGTTCAATGGTTCCCTTTGGAAGCAGTTCAAAGAATGTCCGACAAGAGGAGTTGATGCCTTGGATCACTAATGA
CGAACTCAAGGCGGAGTATCCAGAGCTTTATGACAATGACGAATCTAATGAAGAGGATAGTTCCTAA
Protein sequenceShow/hide protein sequence
MSCLYAQWSCSQLVECSGSTLESLVDLEVEFVLLVQGTMTMTQYGRRFEELSCRVSELVDIEASRIDRFINGLRPEIRGLVRLGQSGTYATNLVSILHQVIKPESLCQEP
SEFIVKEAKITKSSMVPFGSSSKNVRQEELMPWITNDELKAEYPELYDNDESNEEDSS