; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039348 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039348
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger CCHC domain-containing protein
Genome locationchr2:41841000..41847293
RNA-Seq ExpressionLag0039348
SyntenyLag0039348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050949.1 uncharacterized protein E6C27_scaffold761G00770 [Cucumis melo var. makuwa]2.3e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

KAE8653342.1 hypothetical protein Csa_007445 [Cucumis sativus]2.3e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

XP_008450546.1 PREDICTED: uncharacterized protein LOC103492114 isoform X1 [Cucumis melo]2.3e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

XP_022968797.1 uncharacterized protein LOC111467928 isoform X1 [Cucurbita maxima]1.4e-2554.81Show/hide
Query:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM
        F +KQL +E+  NG   KIEI+WSNI+GIR ++K+NEP +LE+E S PPKFYK+    +  +H +W +GSDFT G+AS CRRH +MF   +L+K FERL+
Subjt:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM

Query:  NFDE
         FDE
Subjt:  NFDE

XP_031736050.1 uncharacterized protein LOC105436206 [Cucumis sativus]2.3e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

TrEMBL top hitse value%identityAlignment
A0A0A0M1F5 Uncharacterized protein1.1e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

A0A1S3BPE4 uncharacterized protein LOC103492114 isoform X11.1e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

A0A1S3BQ39 uncharacterized protein LOC103492114 isoform X23.6e-2248.72Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A    RH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

A0A5A7UBN7 Uncharacterized protein1.1e-2349.57Show/hide
Query:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF
        VA      V  + F ++QL WE+L+NG  +KIEIEWSNI+GI+  L+E++P ILE+E + PPKFYK+ +  EPR H +W +GSDFTEG+A   RRH ++F
Subjt:  VAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMF

Query:  CSGVLNKEFERLMNFDE
           VL+K +E+L + D+
Subjt:  CSGVLNKEFERLMNFDE

A0A6J1HUI1 uncharacterized protein LOC111467928 isoform X17.0e-2654.81Show/hide
Query:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM
        F +KQL +E+  NG   KIEI+WSNI+GIR ++K+NEP +LE+E S PPKFYK+    +  +H +W +GSDFT G+AS CRRH +MF   +L+K FERL+
Subjt:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM

Query:  NFDE
         FDE
Subjt:  NFDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54300.1 unknown protein1.3e-0833.33Show/hide
Query:  VAAVNSPAVLA-WGFRRKQLTWEVLQN-------GYWKKIEIEWSNIVGIRTSL-KENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEE-GSDFTEGEA
        V A N   ++A + F +K+L WE L            +KIEI+W+++     S+   +E  IL+IE  + P F+ +  N +   H +W++   DFT   A
Subjt:  VAAVNSPAVLA-WGFRRKQLTWEVLQN-------GYWKKIEIEWSNIVGIRTSL-KENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEE-GSDFTEGEA

Query:  SKCRRHLVMFCSGVLNKEFERLM
        S  RRH + F  GVL K  E+L+
Subjt:  SKCRRHLVMFCSGVLNKEFERLM

AT2G24100.1 unknown protein7.4e-2042.72Show/hide
Query:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM
        F + +L WEVL+ G   KIEI+WS+I+ ++ +L E+EP  L I  +R P F+++  N +PR H  W+  SDFT+G+AS  R+H +    G++NK FE+L+
Subjt:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM

Query:  NFD
          D
Subjt:  NFD

AT3G05770.1 unknown protein1.7e-0833.94Show/hide
Query:  FRRKQLTWEVL-------QNGYWKKIEIEWSNIVGIRTSL-KENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEE-GSDFTEGEASKCRRHLVMFCSGV
        F +K+L WE L             KIEI+W+++     S+   +E  IL+IE  + P F+ +  N +   H +W++   DFT  +AS  RRH + F  GV
Subjt:  FRRKQLTWEVL-------QNGYWKKIEIEWSNIVGIRTSL-KENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEE-GSDFTEGEASKCRRHLVMFCSGV

Query:  LNKEFERLM
        L K  E+L+
Subjt:  LNKEFERLM

AT4G30780.1 unknown protein8.2e-1939.81Show/hide
Query:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM
        F + +L WEVL+ G   KIEI+WS+I+ ++ +  E+ P  L +  +R P F+++  N +PR H  W+  SDFT+G+AS  R+H +    G++NK FE+L+
Subjt:  FRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEPAILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLM

Query:  NFD
          D
Subjt:  NFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTCCGTAACCACAACTGGGTCAAATTACTGTTTTACCCCGATGTTACCTCTGGCTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTACGGATACCCC
CGCTCGCATGTCTGCTACATGGACGCTTTGGATCAATACGTCTGTATCAAATACCAAGCGGGTCGTATCTCATAGTGTTACTAAGATAAGCCAAGCTAATCTAACCATTT
TAGTCGCTCGCAGCCGAATACAATTCATCTTCTTTCCTCTCTCGCTTTCTTCCTCCCGAAACCTCTCTTCAGCATTTTTTTTTTCTGCGTTTTTTCCCACTCTCACGCTG
CTTCGATCCTTCCCCTCTCTTTGTGCAGCTATCGCCGGCAATTGGAAAACCAATTGCCACTGCCGCACGCTTGAACTAGCAGCTTTCCCGACGCCGGCACGTGACCAGAT
CGGCCTGCGATTCATCTTTTACTCTTCGTCGATCGTCTTCTCCGGCAGTTCAGTAACTCGCAGACACGTGGCGGCAGTGAATTCTCCGGCGGTTTTGGCGTGGGGTTTCC
GACGGAAACAACTAACTTGGGAGGTTTTGCAAAATGGGTATTGGAAAAAAATTGAAATCGAATGGTCAAACATTGTAGGAATCAGAACTTCATTGAAGGAAAACGAACCA
GCAATTCTCGAAATTGAGCAATCACGACCACCTAAATTTTACAAGCAACGCCAGAATGTGGAACCACGATCCCATTACAAATGGGAGGAAGGGTCGGATTTTACAGAAGG
AGAAGCTTCCAAATGCAGGAGGCATTTGGTTATGTTTTGTTCGGGAGTGTTGAACAAAGAGTTTGAGAGACTGATGAATTTTGATGAGGGTTGTGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTCCGTAACCACAACTGGGTCAAATTACTGTTTTACCCCGATGTTACCTCTGGCTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTACGGATACCCC
CGCTCGCATGTCTGCTACATGGACGCTTTGGATCAATACGTCTGTATCAAATACCAAGCGGGTCGTATCTCATAGTGTTACTAAGATAAGCCAAGCTAATCTAACCATTT
TAGTCGCTCGCAGCCGAATACAATTCATCTTCTTTCCTCTCTCGCTTTCTTCCTCCCGAAACCTCTCTTCAGCATTTTTTTTTTCTGCGTTTTTTCCCACTCTCACGCTG
CTTCGATCCTTCCCCTCTCTTTGTGCAGCTATCGCCGGCAATTGGAAAACCAATTGCCACTGCCGCACGCTTGAACTAGCAGCTTTCCCGACGCCGGCACGTGACCAGAT
CGGCCTGCGATTCATCTTTTACTCTTCGTCGATCGTCTTCTCCGGCAGTTCAGTAACTCGCAGACACGTGGCGGCAGTGAATTCTCCGGCGGTTTTGGCGTGGGGTTTCC
GACGGAAACAACTAACTTGGGAGGTTTTGCAAAATGGGTATTGGAAAAAAATTGAAATCGAATGGTCAAACATTGTAGGAATCAGAACTTCATTGAAGGAAAACGAACCA
GCAATTCTCGAAATTGAGCAATCACGACCACCTAAATTTTACAAGCAACGCCAGAATGTGGAACCACGATCCCATTACAAATGGGAGGAAGGGTCGGATTTTACAGAAGG
AGAAGCTTCCAAATGCAGGAGGCATTTGGTTATGTTTTGTTCGGGAGTGTTGAACAAAGAGTTTGAGAGACTGATGAATTTTGATGAGGGTTGTGTGAATTGA
Protein sequenceShow/hide protein sequence
MSVRNHNWVKLLFYPDVTSGSLSTSAPLMNNLFTDTPARMSATWTLWINTSVSNTKRVVSHSVTKISQANLTILVARSRIQFIFFPLSLSSSRNLSSAFFFSAFFPTLTL
LRSFPSLCAAIAGNWKTNCHCRTLELAAFPTPARDQIGLRFIFYSSSIVFSGSSVTRRHVAAVNSPAVLAWGFRRKQLTWEVLQNGYWKKIEIEWSNIVGIRTSLKENEP
AILEIEQSRPPKFYKQRQNVEPRSHYKWEEGSDFTEGEASKCRRHLVMFCSGVLNKEFERLMNFDEGCVN